Enterococcus faecalis α1–2‐mannosidase (EfMan‐I): an efficient catalyst for glycoprotein N‐glycan modification
While multiple α 1–2‐mannosidases are necessary for glycoprotein N‐glycan maturation in vertebrates, a single bacterial α1–2‐mannosidase can be sufficient to cleave all α1–2‐linked mannose residues in host glycoprotein N‐glycans. We report here the characterization and crystal structure of a new α1–...
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Veröffentlicht in: | FEBS letters 2020-02, Vol.594 (3), p.439-451 |
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description | While multiple α 1–2‐mannosidases are necessary for glycoprotein N‐glycan maturation in vertebrates, a single bacterial α1–2‐mannosidase can be sufficient to cleave all α1–2‐linked mannose residues in host glycoprotein N‐glycans. We report here the characterization and crystal structure of a new α1–2‐mannosidase (EfMan‐I) from Enterococcus faecalis, a Gram‐positive opportunistic human pathogen. EfMan‐I catalyzes the cleavage of α1–2‐mannose from not only oligomannoses but also high‐mannose‐type N‐glycans on glycoproteins. Its 2.15 Å resolution crystal structure reveals a two‐domain enzyme fold similar to other CAZy GH92 mannosidases. An unexpected potassium ion was observed bridging two domains near the active site. These findings support EfMan‐I as an effective catalyst for in vitro N‐glycan modification of glycoproteins with high‐mannose‐type N‐glycans.
EfMan‐I from Enterococcus faecalis (crystal structure shown on the left) efficiently catalyzing the cleavage of all α1–2‐linked mannose residues in high‐mannose N‐glycans on glycoproteins. |
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EfMan‐I from Enterococcus faecalis (crystal structure shown on the left) efficiently catalyzing the cleavage of all α1–2‐linked mannose residues in high‐mannose N‐glycans on glycoproteins.</description><identifier>ISSN: 0014-5793</identifier><identifier>EISSN: 1873-3468</identifier><identifier>DOI: 10.1002/1873-3468.13618</identifier><identifier>PMID: 31552675</identifier><language>eng</language><publisher>England: Wiley Blackwell (John Wiley & Sons)</publisher><subject>alpha‐mannosidase ; Biocatalysis ; Catalytic Domain ; Cloning, Molecular ; crystal structure ; Crystallography, X-Ray ; Enterococcus faecalis - enzymology ; glycoprotein modification ; Glycoproteins - chemistry ; Glycoproteins - metabolism ; Hydrogen-Ion Concentration ; mannosidase ; Mannosidases - chemistry ; Mannosidases - genetics ; Mannosidases - metabolism ; N‐glycan enzymatic modification ; Polysaccharides - metabolism ; Substrate Specificity</subject><ispartof>FEBS letters, 2020-02, Vol.594 (3), p.439-451</ispartof><rights>2019 Federation of European Biochemical Societies</rights><rights>2019 Federation of European Biochemical Societies.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4488-86699b423fbeb0b7cfd233fd32d7e8304903df8320b8b062430e7fbba602637d3</citedby><cites>FETCH-LOGICAL-c4488-86699b423fbeb0b7cfd233fd32d7e8304903df8320b8b062430e7fbba602637d3</cites><orcidid>0000-0002-3160-614X ; 000000023160614X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2F1873-3468.13618$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2F1873-3468.13618$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,314,780,784,885,1417,1433,27923,27924,45573,45574,46408,46832</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31552675$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/1598708$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Yanhong</creatorcontrib><creatorcontrib>Li, Riyao</creatorcontrib><creatorcontrib>Yu, Hai</creatorcontrib><creatorcontrib>Sheng, Xue</creatorcontrib><creatorcontrib>Wang, Jing</creatorcontrib><creatorcontrib>Fisher, Andrew J.</creatorcontrib><creatorcontrib>Chen, Xi</creatorcontrib><title>Enterococcus faecalis α1–2‐mannosidase (EfMan‐I): an efficient catalyst for glycoprotein N‐glycan modification</title><title>FEBS letters</title><addtitle>FEBS Lett</addtitle><description>While multiple α 1–2‐mannosidases are necessary for glycoprotein N‐glycan maturation in vertebrates, a single bacterial α1–2‐mannosidase can be sufficient to cleave all α1–2‐linked mannose residues in host glycoprotein N‐glycans. We report here the characterization and crystal structure of a new α1–2‐mannosidase (EfMan‐I) from Enterococcus faecalis, a Gram‐positive opportunistic human pathogen. EfMan‐I catalyzes the cleavage of α1–2‐mannose from not only oligomannoses but also high‐mannose‐type N‐glycans on glycoproteins. Its 2.15 Å resolution crystal structure reveals a two‐domain enzyme fold similar to other CAZy GH92 mannosidases. An unexpected potassium ion was observed bridging two domains near the active site. These findings support EfMan‐I as an effective catalyst for in vitro N‐glycan modification of glycoproteins with high‐mannose‐type N‐glycans.
EfMan‐I from Enterococcus faecalis (crystal structure shown on the left) efficiently catalyzing the cleavage of all α1–2‐linked mannose residues in high‐mannose N‐glycans on glycoproteins.</description><subject>alpha‐mannosidase</subject><subject>Biocatalysis</subject><subject>Catalytic Domain</subject><subject>Cloning, Molecular</subject><subject>crystal structure</subject><subject>Crystallography, X-Ray</subject><subject>Enterococcus faecalis - enzymology</subject><subject>glycoprotein modification</subject><subject>Glycoproteins - chemistry</subject><subject>Glycoproteins - metabolism</subject><subject>Hydrogen-Ion Concentration</subject><subject>mannosidase</subject><subject>Mannosidases - chemistry</subject><subject>Mannosidases - genetics</subject><subject>Mannosidases - metabolism</subject><subject>N‐glycan enzymatic modification</subject><subject>Polysaccharides - metabolism</subject><subject>Substrate Specificity</subject><issn>0014-5793</issn><issn>1873-3468</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkT1uFDEUxy1ERJZATYdGVKGYxB8ztociEkSbDylAA7Vle-zEaMZebC-wXY6AxAW4AlfgADlEToKHCSuoqCw__97vPesPwBMEDxCE-BBxRmrSUH6ACEX8HlhsK_fBAkLU1C3ryC54mNIHWO4cdQ_ALkFtiylrF-DL0mcTgw5ar9PP71YaLQeXqpsf6Pb6G769_jpK70NyvUym2l_a19KX4vnzF5X0lbHWaWd8rrTMctikXNkQq8tho8Mqhmycr94UfCoUfAy9Kw0yu-AfgR0rh2Qe35174P3J8t3xWX3x9vT8-OVFrZuG85pT2nWqwcQqo6Bi2vaYENsT3DPDCWw6SHrLCYaKK0hxQ6BhVilJIaaE9WQPHM3e1VqNptdl2SgHsYpulHEjgnTi3xfvrsRl-CQYRJh2qAiezYKQshNJu2z0lQ7eG50FajvOIC_Q_t2UGD6uTcpidEmbYZDehHUSGHes6Cid0MMZ1TGkFI3d7oKgmEIVU4RiilD8DrV0PP37C1v-T4oFoDPw2Q1m8z-fOFm-wrP5F81Xsss</recordid><startdate>202002</startdate><enddate>202002</enddate><creator>Li, Yanhong</creator><creator>Li, Riyao</creator><creator>Yu, Hai</creator><creator>Sheng, Xue</creator><creator>Wang, Jing</creator><creator>Fisher, Andrew J.</creator><creator>Chen, Xi</creator><general>Wiley Blackwell (John Wiley & Sons)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>OTOTI</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-3160-614X</orcidid><orcidid>https://orcid.org/000000023160614X</orcidid></search><sort><creationdate>202002</creationdate><title>Enterococcus faecalis α1–2‐mannosidase (EfMan‐I): an efficient catalyst for glycoprotein N‐glycan modification</title><author>Li, Yanhong ; Li, Riyao ; Yu, Hai ; Sheng, Xue ; Wang, Jing ; Fisher, Andrew J. ; Chen, Xi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4488-86699b423fbeb0b7cfd233fd32d7e8304903df8320b8b062430e7fbba602637d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>alpha‐mannosidase</topic><topic>Biocatalysis</topic><topic>Catalytic Domain</topic><topic>Cloning, Molecular</topic><topic>crystal structure</topic><topic>Crystallography, X-Ray</topic><topic>Enterococcus faecalis - enzymology</topic><topic>glycoprotein modification</topic><topic>Glycoproteins - chemistry</topic><topic>Glycoproteins - metabolism</topic><topic>Hydrogen-Ion Concentration</topic><topic>mannosidase</topic><topic>Mannosidases - chemistry</topic><topic>Mannosidases - genetics</topic><topic>Mannosidases - metabolism</topic><topic>N‐glycan enzymatic modification</topic><topic>Polysaccharides - metabolism</topic><topic>Substrate Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Yanhong</creatorcontrib><creatorcontrib>Li, Riyao</creatorcontrib><creatorcontrib>Yu, Hai</creatorcontrib><creatorcontrib>Sheng, Xue</creatorcontrib><creatorcontrib>Wang, Jing</creatorcontrib><creatorcontrib>Fisher, Andrew J.</creatorcontrib><creatorcontrib>Chen, Xi</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>FEBS letters</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Yanhong</au><au>Li, Riyao</au><au>Yu, Hai</au><au>Sheng, Xue</au><au>Wang, Jing</au><au>Fisher, Andrew J.</au><au>Chen, Xi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Enterococcus faecalis α1–2‐mannosidase (EfMan‐I): an efficient catalyst for glycoprotein N‐glycan modification</atitle><jtitle>FEBS letters</jtitle><addtitle>FEBS Lett</addtitle><date>2020-02</date><risdate>2020</risdate><volume>594</volume><issue>3</issue><spage>439</spage><epage>451</epage><pages>439-451</pages><issn>0014-5793</issn><eissn>1873-3468</eissn><abstract>While multiple α 1–2‐mannosidases are necessary for glycoprotein N‐glycan maturation in vertebrates, a single bacterial α1–2‐mannosidase can be sufficient to cleave all α1–2‐linked mannose residues in host glycoprotein N‐glycans. We report here the characterization and crystal structure of a new α1–2‐mannosidase (EfMan‐I) from Enterococcus faecalis, a Gram‐positive opportunistic human pathogen. EfMan‐I catalyzes the cleavage of α1–2‐mannose from not only oligomannoses but also high‐mannose‐type N‐glycans on glycoproteins. Its 2.15 Å resolution crystal structure reveals a two‐domain enzyme fold similar to other CAZy GH92 mannosidases. An unexpected potassium ion was observed bridging two domains near the active site. These findings support EfMan‐I as an effective catalyst for in vitro N‐glycan modification of glycoproteins with high‐mannose‐type N‐glycans.
EfMan‐I from Enterococcus faecalis (crystal structure shown on the left) efficiently catalyzing the cleavage of all α1–2‐linked mannose residues in high‐mannose N‐glycans on glycoproteins.</abstract><cop>England</cop><pub>Wiley Blackwell (John Wiley & Sons)</pub><pmid>31552675</pmid><doi>10.1002/1873-3468.13618</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-3160-614X</orcidid><orcidid>https://orcid.org/000000023160614X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | alpha‐mannosidase Biocatalysis Catalytic Domain Cloning, Molecular crystal structure Crystallography, X-Ray Enterococcus faecalis - enzymology glycoprotein modification Glycoproteins - chemistry Glycoproteins - metabolism Hydrogen-Ion Concentration mannosidase Mannosidases - chemistry Mannosidases - genetics Mannosidases - metabolism N‐glycan enzymatic modification Polysaccharides - metabolism Substrate Specificity |
title | Enterococcus faecalis α1–2‐mannosidase (EfMan‐I): an efficient catalyst for glycoprotein N‐glycan modification |
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