The SUSTech-SYSU dataset for automatically segmenting and classifying corneal ulcers

Corneal ulcer is a common ophthalmic symptom. Segmentation algorithms are needed to identify and quantify corneal ulcers from ocular staining images. Developments of such algorithms have been obstructed by a lack of high quality datasets (the ocular staining images and the corresponding gold-standar...

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Veröffentlicht in:Scientific data 2020-01, Vol.7 (1), p.23-23, Article 23
Hauptverfasser: Deng, Lijie, Lyu, Junyan, Huang, Haixiang, Deng, Yuqing, Yuan, Jin, Tang, Xiaoying
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creator Deng, Lijie
Lyu, Junyan
Huang, Haixiang
Deng, Yuqing
Yuan, Jin
Tang, Xiaoying
description Corneal ulcer is a common ophthalmic symptom. Segmentation algorithms are needed to identify and quantify corneal ulcers from ocular staining images. Developments of such algorithms have been obstructed by a lack of high quality datasets (the ocular staining images and the corresponding gold-standard ulcer segmentation labels), especially for supervised learning based segmentation algorithms. In such context, we prepare a dataset containing 712 ocular staining images and the associated segmentation labels of flaky corneal ulcers. In addition to segmentation labels for flaky corneal ulcers, we also provide each image with three-fold class labels: firstly, each image has a label in terms of its general ulcer pattern; secondly, each image has a label in terms of its specific ulcer pattern; thirdly, each image has a label indicating its ulcer severity degree. This dataset not only provides an excellent opportunity for investigating the accuracy and reliability of different segmentation and classification algorithms for corneal ulcers, but also advances the development of new supervised learning based algorithms especially those in the deep learning framework. Measurement(s) corneal ulcer Technology Type(s) staining Factor Type(s) ulcer severity • ulcer pattern Sample Characteristic - Organism Homo sapiens Machine-accessible metadata file describing the reported data: https://doi.org/10.6084/m9.figshare.11371803
doi_str_mv 10.1038/s41597-020-0360-7
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subjects 631/114/1314
631/1647/245/2225
692/699/3161/3163
Algorithms
Cornea
Corneal Ulcer - diagnostic imaging
Data Descriptor
Datasets
Deep learning
Humanities and Social Sciences
Humans
Image processing
Image Processing, Computer-Assisted - methods
multidisciplinary
Reproducibility of Results
Science
Science (multidisciplinary)
Segmentation
Ulcers
title The SUSTech-SYSU dataset for automatically segmenting and classifying corneal ulcers
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