Blastocystis Colonization Is Associated with Increased Diversity and Altered Gut Bacterial Communities in Healthy Malian Children
is the most common protozoan colonizing the gut of vertebrates. It modulates the human digestive microbiota in the absence of inflammation and gastrointestinal disease. Although it has been associated with human diseases, including inflammatory bowel disease, its pathogenicity remains controversial....
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Veröffentlicht in: | Microorganisms (Basel) 2019-12, Vol.7 (12), p.649 |
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creator | Kodio, Aly Coulibaly, Drissa Koné, Abdoulaye Kassoum Konaté, Salimata Doumbo, Safiatou Guindo, Abdoulaye Bittar, Fadi Gouriet, Frédérique Raoult, Didier Thera, Mahamadou Aly Ranque, Stéphane |
description | is the most common protozoan colonizing the gut of vertebrates. It modulates the human digestive microbiota in the absence of inflammation and gastrointestinal disease. Although it has been associated with human diseases, including inflammatory bowel disease, its pathogenicity remains controversial. This study aimed to assess the influence of
on the gut bacterial communities in healthy children. We conducted a cross-sectional study on 147
colonized and 149
noncolonized Malian children, with
colonization assessed by real-time PCR and gut microbial communities characterized via 16S rRNA gene (Illumina MiSeq) sequencing and bioinformatics analysis. The gut microbiota diversity was higher in Blastocystis-colonized compared to
noncolonized children. The phyla Firmicutes, Elusimicrobia, Lentisphaerae, and Euryarchaeota were higher in
colonized children, whereas Actinobacteria, Proteobacteria, unassigned bacteria, and Deinococcus-Thermus were higher in
noncolonized children. Moreover, Faecalibacterium prausnitzii (family Ruminococcaceae) and Roseburia sp. (family Lachnospiraceae) abundance was higher in Blastocystis-colonized children. We conclude that Blastocystis colonization is significantly associated with a higher diversity of the gut bacterial communities in healthy children, while it is not associated with the presence of potentially pathogenic bacteria in the human gut. |
doi_str_mv | 10.3390/microorganisms7120649 |
format | Article |
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on the gut bacterial communities in healthy children. We conducted a cross-sectional study on 147
colonized and 149
noncolonized Malian children, with
colonization assessed by real-time PCR and gut microbial communities characterized via 16S rRNA gene (Illumina MiSeq) sequencing and bioinformatics analysis. The gut microbiota diversity was higher in Blastocystis-colonized compared to
noncolonized children. The phyla Firmicutes, Elusimicrobia, Lentisphaerae, and Euryarchaeota were higher in
colonized children, whereas Actinobacteria, Proteobacteria, unassigned bacteria, and Deinococcus-Thermus were higher in
noncolonized children. Moreover, Faecalibacterium prausnitzii (family Ruminococcaceae) and Roseburia sp. (family Lachnospiraceae) abundance was higher in Blastocystis-colonized children. We conclude that Blastocystis colonization is significantly associated with a higher diversity of the gut bacterial communities in healthy children, while it is not associated with the presence of potentially pathogenic bacteria in the human gut.</description><identifier>ISSN: 2076-2607</identifier><identifier>EISSN: 2076-2607</identifier><identifier>DOI: 10.3390/microorganisms7120649</identifier><identifier>PMID: 31817168</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Asymptomatic ; Automation ; Bacteria ; Bacteriology ; Bioinformatics ; Blastocystis ; Cardiology and cardiovascular system ; Children ; Colonization ; Digestive system ; Emerging diseases ; Gastrointestinal diseases ; Gastrointestinal tract ; Gene sequencing ; Human health and pathology ; Infectious diseases ; Inflammatory bowel diseases ; Intestinal microflora ; Life Sciences ; Microbial activity ; Microbiology and Parasitology ; Microbiota ; Microorganisms ; Parasitology ; Pathogenicity ; Pathogens ; Protozoa ; rRNA 16S ; Vertebrates ; Virology</subject><ispartof>Microorganisms (Basel), 2019-12, Vol.7 (12), p.649</ispartof><rights>2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Attribution</rights><rights>2019 by the authors. 2019</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c473t-9f64db48c7a5ff3104db85e124c066825f0b2c7971cf5b75fc7b49cc9f9c7fab3</citedby><cites>FETCH-LOGICAL-c473t-9f64db48c7a5ff3104db85e124c066825f0b2c7971cf5b75fc7b49cc9f9c7fab3</cites><orcidid>0000-0003-4052-344X ; 0000-0003-3293-5276 ; 0000-0002-7412-0940 ; 0000-0002-2679-035X ; 0000-0002-1691-972X ; 0000-0002-2895-5824 ; 0000-0002-0633-5974</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6956266/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6956266/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31817168$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://amu.hal.science/hal-02454474$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Kodio, Aly</creatorcontrib><creatorcontrib>Coulibaly, Drissa</creatorcontrib><creatorcontrib>Koné, Abdoulaye Kassoum</creatorcontrib><creatorcontrib>Konaté, Salimata</creatorcontrib><creatorcontrib>Doumbo, Safiatou</creatorcontrib><creatorcontrib>Guindo, Abdoulaye</creatorcontrib><creatorcontrib>Bittar, Fadi</creatorcontrib><creatorcontrib>Gouriet, Frédérique</creatorcontrib><creatorcontrib>Raoult, Didier</creatorcontrib><creatorcontrib>Thera, Mahamadou Aly</creatorcontrib><creatorcontrib>Ranque, Stéphane</creatorcontrib><title>Blastocystis Colonization Is Associated with Increased Diversity and Altered Gut Bacterial Communities in Healthy Malian Children</title><title>Microorganisms (Basel)</title><addtitle>Microorganisms</addtitle><description>is the most common protozoan colonizing the gut of vertebrates. It modulates the human digestive microbiota in the absence of inflammation and gastrointestinal disease. Although it has been associated with human diseases, including inflammatory bowel disease, its pathogenicity remains controversial. This study aimed to assess the influence of
on the gut bacterial communities in healthy children. We conducted a cross-sectional study on 147
colonized and 149
noncolonized Malian children, with
colonization assessed by real-time PCR and gut microbial communities characterized via 16S rRNA gene (Illumina MiSeq) sequencing and bioinformatics analysis. The gut microbiota diversity was higher in Blastocystis-colonized compared to
noncolonized children. The phyla Firmicutes, Elusimicrobia, Lentisphaerae, and Euryarchaeota were higher in
colonized children, whereas Actinobacteria, Proteobacteria, unassigned bacteria, and Deinococcus-Thermus were higher in
noncolonized children. Moreover, Faecalibacterium prausnitzii (family Ruminococcaceae) and Roseburia sp. (family Lachnospiraceae) abundance was higher in Blastocystis-colonized children. We conclude that Blastocystis colonization is significantly associated with a higher diversity of the gut bacterial communities in healthy children, while it is not associated with the presence of potentially pathogenic bacteria in the human gut.</description><subject>Asymptomatic</subject><subject>Automation</subject><subject>Bacteria</subject><subject>Bacteriology</subject><subject>Bioinformatics</subject><subject>Blastocystis</subject><subject>Cardiology and cardiovascular system</subject><subject>Children</subject><subject>Colonization</subject><subject>Digestive system</subject><subject>Emerging diseases</subject><subject>Gastrointestinal diseases</subject><subject>Gastrointestinal tract</subject><subject>Gene sequencing</subject><subject>Human health and pathology</subject><subject>Infectious diseases</subject><subject>Inflammatory bowel diseases</subject><subject>Intestinal microflora</subject><subject>Life Sciences</subject><subject>Microbial activity</subject><subject>Microbiology and Parasitology</subject><subject>Microbiota</subject><subject>Microorganisms</subject><subject>Parasitology</subject><subject>Pathogenicity</subject><subject>Pathogens</subject><subject>Protozoa</subject><subject>rRNA 16S</subject><subject>Vertebrates</subject><subject>Virology</subject><issn>2076-2607</issn><issn>2076-2607</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNptUktvVCEYvTEa29T-BA2JG12M8uayMZmO2plkjBtdEy4XOjRcqMAdM-7859JMbWojGzgf55yPx-m6lwi-I0TC95M3OaV8paMvUxEIQ07lk-4UQ8EXmEPx9MH6pDsv5Rq2IRHpGXrenRDUI4F4f9r9vgi61GQOpfoCVimk6H_p6lMEmwKWpSTjdbUj-OnrDmyiyVaXBj_6vc3F1wPQcQTLUG1u1cu5ggttGvA6NLdpmqOv3hbgI1hbHeruAL7o4HUEq50PY7bxRffM6VDs-d181n3__Onbar3Yfr3crJbbhaGC1IV0nI4D7Y3QzDmCYEM9swhTAznvMXNwwEZIgYxjg2DOiIFKY6STRjg9kLPuw9H3Zh4mOxoba9ZB3WQ_6XxQSXv17070O3WV9opLxjHnzeDt0WD3SLZebtVtDWLKKBV0jxr3zV2znH7MtlQ1-WJsCDraNBeFCSaUC8Zko75-RL1Oc47tKRRmtJcIMt43Fjuy2seXkq27PwGC6jYT6r-ZaLpXD299r_qbAPIHcca5Yg</recordid><startdate>20191204</startdate><enddate>20191204</enddate><creator>Kodio, Aly</creator><creator>Coulibaly, Drissa</creator><creator>Koné, Abdoulaye Kassoum</creator><creator>Konaté, Salimata</creator><creator>Doumbo, Safiatou</creator><creator>Guindo, Abdoulaye</creator><creator>Bittar, Fadi</creator><creator>Gouriet, Frédérique</creator><creator>Raoult, Didier</creator><creator>Thera, Mahamadou Aly</creator><creator>Ranque, Stéphane</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T7</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PYCSY</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-4052-344X</orcidid><orcidid>https://orcid.org/0000-0003-3293-5276</orcidid><orcidid>https://orcid.org/0000-0002-7412-0940</orcidid><orcidid>https://orcid.org/0000-0002-2679-035X</orcidid><orcidid>https://orcid.org/0000-0002-1691-972X</orcidid><orcidid>https://orcid.org/0000-0002-2895-5824</orcidid><orcidid>https://orcid.org/0000-0002-0633-5974</orcidid></search><sort><creationdate>20191204</creationdate><title>Blastocystis Colonization Is Associated with Increased Diversity and Altered Gut Bacterial Communities in Healthy Malian Children</title><author>Kodio, Aly ; Coulibaly, Drissa ; Koné, Abdoulaye Kassoum ; Konaté, Salimata ; Doumbo, Safiatou ; Guindo, Abdoulaye ; Bittar, Fadi ; Gouriet, Frédérique ; Raoult, Didier ; Thera, Mahamadou Aly ; Ranque, Stéphane</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c473t-9f64db48c7a5ff3104db85e124c066825f0b2c7971cf5b75fc7b49cc9f9c7fab3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Asymptomatic</topic><topic>Automation</topic><topic>Bacteria</topic><topic>Bacteriology</topic><topic>Bioinformatics</topic><topic>Blastocystis</topic><topic>Cardiology and cardiovascular system</topic><topic>Children</topic><topic>Colonization</topic><topic>Digestive system</topic><topic>Emerging diseases</topic><topic>Gastrointestinal diseases</topic><topic>Gastrointestinal tract</topic><topic>Gene sequencing</topic><topic>Human health and pathology</topic><topic>Infectious diseases</topic><topic>Inflammatory bowel diseases</topic><topic>Intestinal microflora</topic><topic>Life Sciences</topic><topic>Microbial activity</topic><topic>Microbiology and Parasitology</topic><topic>Microbiota</topic><topic>Microorganisms</topic><topic>Parasitology</topic><topic>Pathogenicity</topic><topic>Pathogens</topic><topic>Protozoa</topic><topic>rRNA 16S</topic><topic>Vertebrates</topic><topic>Virology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kodio, Aly</creatorcontrib><creatorcontrib>Coulibaly, Drissa</creatorcontrib><creatorcontrib>Koné, Abdoulaye Kassoum</creatorcontrib><creatorcontrib>Konaté, Salimata</creatorcontrib><creatorcontrib>Doumbo, Safiatou</creatorcontrib><creatorcontrib>Guindo, Abdoulaye</creatorcontrib><creatorcontrib>Bittar, Fadi</creatorcontrib><creatorcontrib>Gouriet, Frédérique</creatorcontrib><creatorcontrib>Raoult, Didier</creatorcontrib><creatorcontrib>Thera, Mahamadou Aly</creatorcontrib><creatorcontrib>Ranque, Stéphane</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Environmental Science Collection</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Microorganisms (Basel)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kodio, Aly</au><au>Coulibaly, Drissa</au><au>Koné, Abdoulaye Kassoum</au><au>Konaté, Salimata</au><au>Doumbo, Safiatou</au><au>Guindo, Abdoulaye</au><au>Bittar, Fadi</au><au>Gouriet, Frédérique</au><au>Raoult, Didier</au><au>Thera, Mahamadou Aly</au><au>Ranque, Stéphane</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Blastocystis Colonization Is Associated with Increased Diversity and Altered Gut Bacterial Communities in Healthy Malian Children</atitle><jtitle>Microorganisms (Basel)</jtitle><addtitle>Microorganisms</addtitle><date>2019-12-04</date><risdate>2019</risdate><volume>7</volume><issue>12</issue><spage>649</spage><pages>649-</pages><issn>2076-2607</issn><eissn>2076-2607</eissn><abstract>is the most common protozoan colonizing the gut of vertebrates. It modulates the human digestive microbiota in the absence of inflammation and gastrointestinal disease. Although it has been associated with human diseases, including inflammatory bowel disease, its pathogenicity remains controversial. This study aimed to assess the influence of
on the gut bacterial communities in healthy children. We conducted a cross-sectional study on 147
colonized and 149
noncolonized Malian children, with
colonization assessed by real-time PCR and gut microbial communities characterized via 16S rRNA gene (Illumina MiSeq) sequencing and bioinformatics analysis. The gut microbiota diversity was higher in Blastocystis-colonized compared to
noncolonized children. The phyla Firmicutes, Elusimicrobia, Lentisphaerae, and Euryarchaeota were higher in
colonized children, whereas Actinobacteria, Proteobacteria, unassigned bacteria, and Deinococcus-Thermus were higher in
noncolonized children. Moreover, Faecalibacterium prausnitzii (family Ruminococcaceae) and Roseburia sp. (family Lachnospiraceae) abundance was higher in Blastocystis-colonized children. We conclude that Blastocystis colonization is significantly associated with a higher diversity of the gut bacterial communities in healthy children, while it is not associated with the presence of potentially pathogenic bacteria in the human gut.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>31817168</pmid><doi>10.3390/microorganisms7120649</doi><orcidid>https://orcid.org/0000-0003-4052-344X</orcidid><orcidid>https://orcid.org/0000-0003-3293-5276</orcidid><orcidid>https://orcid.org/0000-0002-7412-0940</orcidid><orcidid>https://orcid.org/0000-0002-2679-035X</orcidid><orcidid>https://orcid.org/0000-0002-1691-972X</orcidid><orcidid>https://orcid.org/0000-0002-2895-5824</orcidid><orcidid>https://orcid.org/0000-0002-0633-5974</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Asymptomatic Automation Bacteria Bacteriology Bioinformatics Blastocystis Cardiology and cardiovascular system Children Colonization Digestive system Emerging diseases Gastrointestinal diseases Gastrointestinal tract Gene sequencing Human health and pathology Infectious diseases Inflammatory bowel diseases Intestinal microflora Life Sciences Microbial activity Microbiology and Parasitology Microbiota Microorganisms Parasitology Pathogenicity Pathogens Protozoa rRNA 16S Vertebrates Virology |
title | Blastocystis Colonization Is Associated with Increased Diversity and Altered Gut Bacterial Communities in Healthy Malian Children |
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