Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex

Mammalian mRNA biogenesis requires specific recognition of a hexanucleotide AAUAAA motif in the polyadenylation signals (PAS) of precursor mRNA (pre-mRNA) transcripts by the cleavage and polyadenylation specificity factor (CPSF) complex. Here we present a 3.1-Å-resolution cryo-EM structure of a core...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Nature structural & molecular biology 2018-02, Vol.25 (2), p.135-138
Hauptverfasser: Clerici, Marcello, Faini, Marco, Muckenfuss, Lena M., Aebersold, Ruedi, Jinek, Martin
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 138
container_issue 2
container_start_page 135
container_title Nature structural & molecular biology
container_volume 25
creator Clerici, Marcello
Faini, Marco
Muckenfuss, Lena M.
Aebersold, Ruedi
Jinek, Martin
description Mammalian mRNA biogenesis requires specific recognition of a hexanucleotide AAUAAA motif in the polyadenylation signals (PAS) of precursor mRNA (pre-mRNA) transcripts by the cleavage and polyadenylation specificity factor (CPSF) complex. Here we present a 3.1-Å-resolution cryo-EM structure of a core CPSF module bound to the PAS hexamer motif. The structure reveals the molecular interactions responsible for base-specific recognition, providing a rationale for mechanistic differences between mammalian and yeast 3′ polyadenylation. The cryo-EM structure of the human core CPSF complex, containing CPSF160, WDR33, CPSF30 and Fip1 subunits, bound to its RNA target reveals the mechanism of PAS recognition.
doi_str_mv 10.1038/s41594-017-0020-6
format Article
fullrecord <record><control><sourceid>gale_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6900284</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A593382130</galeid><sourcerecordid>A593382130</sourcerecordid><originalsourceid>FETCH-LOGICAL-c637t-da1484a3b5f6e5bd035818795f79b85aae212764646f99685cc0b0199b64877d3</originalsourceid><addsrcrecordid>eNp1klGL1DAQx4so3nn6AXyRgi_nQ8-kSZrkRSiLpwcHiuvhY0jTtJujTdakldtv79Q991xRJpCQ-c0_meGfZS8xusCIiLeJYiZpgTAvECpRUT3KTjGjrJBSsMeHsyQn2bOUboFhjJOn2UkpCROcidPs23qKs5nmqIe80cmlPHR5Xd_UdZ1vw7DTrfW7QU8u-Dy53gMWrQm9d7-uml0-bWy-mUft89Xn9WVuwrgd7N3z7Emnh2Rf3O9n2c3l-6-rj8X1pw9Xq_q6MBXhU9FqTAXVpGFdZVnTIvgXFlyyjstGMK1tiUteUYhOykowY1CDsJRNRQXnLTnL3u11t3Mz2tZYP0ErahvdqONOBe3Ucca7jerDD1VJGIegIHB-LxDD99mmSY0uGTsM2tswJwVvIQqLVoC-_gu9DXOEkSRVYiEkL0H0ger1YJXzXYB3zSKqaiYJESUmC3XxDwqitaMzwdvOwf1RwZujAmAmezf1ek5JXa2_HLN4z5oYUoq2O8wDI7U4R-2do8A5anGOWpp79ecgDxW_rQJAuQcSpHxv40P3_1f9CQV9yzw</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2188972690</pqid></control><display><type>article</type><title>Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex</title><source>MEDLINE</source><source>SpringerLink Journals</source><source>Nature Journals Online</source><creator>Clerici, Marcello ; Faini, Marco ; Muckenfuss, Lena M. ; Aebersold, Ruedi ; Jinek, Martin</creator><creatorcontrib>Clerici, Marcello ; Faini, Marco ; Muckenfuss, Lena M. ; Aebersold, Ruedi ; Jinek, Martin</creatorcontrib><description>Mammalian mRNA biogenesis requires specific recognition of a hexanucleotide AAUAAA motif in the polyadenylation signals (PAS) of precursor mRNA (pre-mRNA) transcripts by the cleavage and polyadenylation specificity factor (CPSF) complex. Here we present a 3.1-Å-resolution cryo-EM structure of a core CPSF module bound to the PAS hexamer motif. The structure reveals the molecular interactions responsible for base-specific recognition, providing a rationale for mechanistic differences between mammalian and yeast 3′ polyadenylation. The cryo-EM structure of the human core CPSF complex, containing CPSF160, WDR33, CPSF30 and Fip1 subunits, bound to its RNA target reveals the mechanism of PAS recognition.</description><identifier>ISSN: 1545-9993</identifier><identifier>EISSN: 1545-9985</identifier><identifier>DOI: 10.1038/s41594-017-0020-6</identifier><identifier>PMID: 29358758</identifier><language>eng</language><publisher>New York: Nature Publishing Group US</publisher><subject>631/337/1645/2570 ; 631/45/500 ; 631/45/535/1258 ; Amino Acid Motifs ; Biochemistry ; Biological Microscopy ; Biological research ; Biomedical and Life Sciences ; Biosynthesis ; Brief Communication ; Cells (Biology) ; Cleavage And Polyadenylation Specificity Factor - chemistry ; Cryoelectron Microscopy ; Genetic aspects ; Humans ; Hydrogen bonds ; Image Processing, Computer-Assisted ; Life Sciences ; Mammals ; Membrane Biology ; Messenger RNA ; Molecular biology ; Molecular interactions ; Molecular Structure ; Motion ; Nuclear Proteins - chemistry ; Poly A - chemistry ; Polyadenylation ; Polypeptides ; Protein Binding ; Protein Domains ; Protein Multimerization ; Protein Structure ; Recognition ; RNA ; RNA Precursors - chemistry ; RNA, Messenger - chemistry ; Structure ; Transcription (Genetics) ; Yeast ; Yeasts</subject><ispartof>Nature structural &amp; molecular biology, 2018-02, Vol.25 (2), p.135-138</ispartof><rights>The Author(s) 2018</rights><rights>COPYRIGHT 2018 Nature Publishing Group</rights><rights>Copyright Nature Publishing Group Feb 2018</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c637t-da1484a3b5f6e5bd035818795f79b85aae212764646f99685cc0b0199b64877d3</citedby><cites>FETCH-LOGICAL-c637t-da1484a3b5f6e5bd035818795f79b85aae212764646f99685cc0b0199b64877d3</cites><orcidid>0000-0002-7601-210X ; 0000-0002-9576-3267 ; 0000-0003-2906-0982</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/s41594-017-0020-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/s41594-017-0020-6$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29358758$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Clerici, Marcello</creatorcontrib><creatorcontrib>Faini, Marco</creatorcontrib><creatorcontrib>Muckenfuss, Lena M.</creatorcontrib><creatorcontrib>Aebersold, Ruedi</creatorcontrib><creatorcontrib>Jinek, Martin</creatorcontrib><title>Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex</title><title>Nature structural &amp; molecular biology</title><addtitle>Nat Struct Mol Biol</addtitle><addtitle>Nat Struct Mol Biol</addtitle><description>Mammalian mRNA biogenesis requires specific recognition of a hexanucleotide AAUAAA motif in the polyadenylation signals (PAS) of precursor mRNA (pre-mRNA) transcripts by the cleavage and polyadenylation specificity factor (CPSF) complex. Here we present a 3.1-Å-resolution cryo-EM structure of a core CPSF module bound to the PAS hexamer motif. The structure reveals the molecular interactions responsible for base-specific recognition, providing a rationale for mechanistic differences between mammalian and yeast 3′ polyadenylation. The cryo-EM structure of the human core CPSF complex, containing CPSF160, WDR33, CPSF30 and Fip1 subunits, bound to its RNA target reveals the mechanism of PAS recognition.</description><subject>631/337/1645/2570</subject><subject>631/45/500</subject><subject>631/45/535/1258</subject><subject>Amino Acid Motifs</subject><subject>Biochemistry</subject><subject>Biological Microscopy</subject><subject>Biological research</subject><subject>Biomedical and Life Sciences</subject><subject>Biosynthesis</subject><subject>Brief Communication</subject><subject>Cells (Biology)</subject><subject>Cleavage And Polyadenylation Specificity Factor - chemistry</subject><subject>Cryoelectron Microscopy</subject><subject>Genetic aspects</subject><subject>Humans</subject><subject>Hydrogen bonds</subject><subject>Image Processing, Computer-Assisted</subject><subject>Life Sciences</subject><subject>Mammals</subject><subject>Membrane Biology</subject><subject>Messenger RNA</subject><subject>Molecular biology</subject><subject>Molecular interactions</subject><subject>Molecular Structure</subject><subject>Motion</subject><subject>Nuclear Proteins - chemistry</subject><subject>Poly A - chemistry</subject><subject>Polyadenylation</subject><subject>Polypeptides</subject><subject>Protein Binding</subject><subject>Protein Domains</subject><subject>Protein Multimerization</subject><subject>Protein Structure</subject><subject>Recognition</subject><subject>RNA</subject><subject>RNA Precursors - chemistry</subject><subject>RNA, Messenger - chemistry</subject><subject>Structure</subject><subject>Transcription (Genetics)</subject><subject>Yeast</subject><subject>Yeasts</subject><issn>1545-9993</issn><issn>1545-9985</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp1klGL1DAQx4so3nn6AXyRgi_nQ8-kSZrkRSiLpwcHiuvhY0jTtJujTdakldtv79Q991xRJpCQ-c0_meGfZS8xusCIiLeJYiZpgTAvECpRUT3KTjGjrJBSsMeHsyQn2bOUboFhjJOn2UkpCROcidPs23qKs5nmqIe80cmlPHR5Xd_UdZ1vw7DTrfW7QU8u-Dy53gMWrQm9d7-uml0-bWy-mUft89Xn9WVuwrgd7N3z7Emnh2Rf3O9n2c3l-6-rj8X1pw9Xq_q6MBXhU9FqTAXVpGFdZVnTIvgXFlyyjstGMK1tiUteUYhOykowY1CDsJRNRQXnLTnL3u11t3Mz2tZYP0ErahvdqONOBe3Ucca7jerDD1VJGIegIHB-LxDD99mmSY0uGTsM2tswJwVvIQqLVoC-_gu9DXOEkSRVYiEkL0H0ger1YJXzXYB3zSKqaiYJESUmC3XxDwqitaMzwdvOwf1RwZujAmAmezf1ek5JXa2_HLN4z5oYUoq2O8wDI7U4R-2do8A5anGOWpp79ecgDxW_rQJAuQcSpHxv40P3_1f9CQV9yzw</recordid><startdate>20180201</startdate><enddate>20180201</enddate><creator>Clerici, Marcello</creator><creator>Faini, Marco</creator><creator>Muckenfuss, Lena M.</creator><creator>Aebersold, Ruedi</creator><creator>Jinek, Martin</creator><general>Nature Publishing Group US</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PADUT</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-7601-210X</orcidid><orcidid>https://orcid.org/0000-0002-9576-3267</orcidid><orcidid>https://orcid.org/0000-0003-2906-0982</orcidid></search><sort><creationdate>20180201</creationdate><title>Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex</title><author>Clerici, Marcello ; Faini, Marco ; Muckenfuss, Lena M. ; Aebersold, Ruedi ; Jinek, Martin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c637t-da1484a3b5f6e5bd035818795f79b85aae212764646f99685cc0b0199b64877d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>631/337/1645/2570</topic><topic>631/45/500</topic><topic>631/45/535/1258</topic><topic>Amino Acid Motifs</topic><topic>Biochemistry</topic><topic>Biological Microscopy</topic><topic>Biological research</topic><topic>Biomedical and Life Sciences</topic><topic>Biosynthesis</topic><topic>Brief Communication</topic><topic>Cells (Biology)</topic><topic>Cleavage And Polyadenylation Specificity Factor - chemistry</topic><topic>Cryoelectron Microscopy</topic><topic>Genetic aspects</topic><topic>Humans</topic><topic>Hydrogen bonds</topic><topic>Image Processing, Computer-Assisted</topic><topic>Life Sciences</topic><topic>Mammals</topic><topic>Membrane Biology</topic><topic>Messenger RNA</topic><topic>Molecular biology</topic><topic>Molecular interactions</topic><topic>Molecular Structure</topic><topic>Motion</topic><topic>Nuclear Proteins - chemistry</topic><topic>Poly A - chemistry</topic><topic>Polyadenylation</topic><topic>Polypeptides</topic><topic>Protein Binding</topic><topic>Protein Domains</topic><topic>Protein Multimerization</topic><topic>Protein Structure</topic><topic>Recognition</topic><topic>RNA</topic><topic>RNA Precursors - chemistry</topic><topic>RNA, Messenger - chemistry</topic><topic>Structure</topic><topic>Transcription (Genetics)</topic><topic>Yeast</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Clerici, Marcello</creatorcontrib><creatorcontrib>Faini, Marco</creatorcontrib><creatorcontrib>Muckenfuss, Lena M.</creatorcontrib><creatorcontrib>Aebersold, Ruedi</creatorcontrib><creatorcontrib>Jinek, Martin</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Research Library China</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nature structural &amp; molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Clerici, Marcello</au><au>Faini, Marco</au><au>Muckenfuss, Lena M.</au><au>Aebersold, Ruedi</au><au>Jinek, Martin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex</atitle><jtitle>Nature structural &amp; molecular biology</jtitle><stitle>Nat Struct Mol Biol</stitle><addtitle>Nat Struct Mol Biol</addtitle><date>2018-02-01</date><risdate>2018</risdate><volume>25</volume><issue>2</issue><spage>135</spage><epage>138</epage><pages>135-138</pages><issn>1545-9993</issn><eissn>1545-9985</eissn><abstract>Mammalian mRNA biogenesis requires specific recognition of a hexanucleotide AAUAAA motif in the polyadenylation signals (PAS) of precursor mRNA (pre-mRNA) transcripts by the cleavage and polyadenylation specificity factor (CPSF) complex. Here we present a 3.1-Å-resolution cryo-EM structure of a core CPSF module bound to the PAS hexamer motif. The structure reveals the molecular interactions responsible for base-specific recognition, providing a rationale for mechanistic differences between mammalian and yeast 3′ polyadenylation. The cryo-EM structure of the human core CPSF complex, containing CPSF160, WDR33, CPSF30 and Fip1 subunits, bound to its RNA target reveals the mechanism of PAS recognition.</abstract><cop>New York</cop><pub>Nature Publishing Group US</pub><pmid>29358758</pmid><doi>10.1038/s41594-017-0020-6</doi><tpages>4</tpages><orcidid>https://orcid.org/0000-0002-7601-210X</orcidid><orcidid>https://orcid.org/0000-0002-9576-3267</orcidid><orcidid>https://orcid.org/0000-0003-2906-0982</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1545-9993
ispartof Nature structural & molecular biology, 2018-02, Vol.25 (2), p.135-138
issn 1545-9993
1545-9985
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6900284
source MEDLINE; SpringerLink Journals; Nature Journals Online
subjects 631/337/1645/2570
631/45/500
631/45/535/1258
Amino Acid Motifs
Biochemistry
Biological Microscopy
Biological research
Biomedical and Life Sciences
Biosynthesis
Brief Communication
Cells (Biology)
Cleavage And Polyadenylation Specificity Factor - chemistry
Cryoelectron Microscopy
Genetic aspects
Humans
Hydrogen bonds
Image Processing, Computer-Assisted
Life Sciences
Mammals
Membrane Biology
Messenger RNA
Molecular biology
Molecular interactions
Molecular Structure
Motion
Nuclear Proteins - chemistry
Poly A - chemistry
Polyadenylation
Polypeptides
Protein Binding
Protein Domains
Protein Multimerization
Protein Structure
Recognition
RNA
RNA Precursors - chemistry
RNA, Messenger - chemistry
Structure
Transcription (Genetics)
Yeast
Yeasts
title Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-09T04%3A53%3A32IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Structural%20basis%20of%20AAUAAA%20polyadenylation%20signal%20recognition%20by%20the%20human%20CPSF%20complex&rft.jtitle=Nature%20structural%20&%20molecular%20biology&rft.au=Clerici,%20Marcello&rft.date=2018-02-01&rft.volume=25&rft.issue=2&rft.spage=135&rft.epage=138&rft.pages=135-138&rft.issn=1545-9993&rft.eissn=1545-9985&rft_id=info:doi/10.1038/s41594-017-0020-6&rft_dat=%3Cgale_pubme%3EA593382130%3C/gale_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2188972690&rft_id=info:pmid/29358758&rft_galeid=A593382130&rfr_iscdi=true