Evaluation of the results of MOTAKK hepatitis C virus RNA genotyping and hepatitis delta virus external quality assessment programs during 2015-2016

To evaluate the HCV RNA genotyping and HDV RNA tests that are performed in molecular microbiology laboratories in Turkey as part of a national external quality assessment programme, MOTAKK (Moleküler Tanıda Kalite Kontrol) (English translation: Quality control in molecular diagnostics). Plasmas havi...

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Veröffentlicht in:The Turkish journal of gastroenterology 2019-11, Vol.30 (11), p.957-963
Hauptverfasser: Karataylı, Ersin, Soydemir, Ege, Aksoy, Zeynep Büşra, Kızılpınar, Mehtap, Altay Koçak, Aylin, Karataylı, Senem Ceren, Yurdcu, Esra, Yıldırım, Umut, Güriz, Haluk, Bozdayı, Gülendam, Yurdaydın, Cihan, İlhan, Osman, Yıldırım, Yasin, Hdv Study Group, Motakk Hcv Genotype And, Bozdayı, A Mithat
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container_issue 11
container_start_page 957
container_title The Turkish journal of gastroenterology
container_volume 30
creator Karataylı, Ersin
Soydemir, Ege
Aksoy, Zeynep Büşra
Kızılpınar, Mehtap
Altay Koçak, Aylin
Karataylı, Senem Ceren
Yurdcu, Esra
Yıldırım, Umut
Güriz, Haluk
Bozdayı, Gülendam
Yurdaydın, Cihan
İlhan, Osman
Yıldırım, Yasin
Hdv Study Group, Motakk Hcv Genotype And
Bozdayı, A Mithat
description To evaluate the HCV RNA genotyping and HDV RNA tests that are performed in molecular microbiology laboratories in Turkey as part of a national external quality assessment programme, MOTAKK (Moleküler Tanıda Kalite Kontrol) (English translation: Quality control in molecular diagnostics). Plasmas having different HCV RNA genotypes were used to prepare HCV genotype control sera. The HDV RNA main stock was prepared from patients with chronic delta hepatitis who had a significant amount of viral load detected, as per the WHO reference materials on viral load studies that were compiled for the purpose of developing HDV RNA control sera. Samples with different viral loads were prepared from this main stock by dilution. The prepared controls were delivered to the registered laboratories. The laboratories carried out the relevant tests and entered their results via the MOTAKK web page. External quality assessment (EQA) reports of the participants were uploaded to the website as well. In total, there were 23 participating laboratories, out of which 20 exclusively performed HCV genotyping, and 15 and 16 only performed HDV RNA in 2015 and 2016, respectively. The success rate of the results of the HCV genotype was 56-96% in 2015 and 30-95% in 2016. The tube with a 30% success rate had a recombinant type of HCV, therefore, it could not be detected in most of the laboratories. The HDV RNA results were evaluated qualitatively. Accordingly, HDV RNA detection rates of participant laboratories were 71-100% in 2015 and 50-100% in 2016. This study was the first national external quality control program in Turkey regarding HCV RNA genotyping and HDV RNA in the field of molecular microbiology, and it was implemented successfully.
doi_str_mv 10.5152/tjg.2019.18859
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Plasmas having different HCV RNA genotypes were used to prepare HCV genotype control sera. The HDV RNA main stock was prepared from patients with chronic delta hepatitis who had a significant amount of viral load detected, as per the WHO reference materials on viral load studies that were compiled for the purpose of developing HDV RNA control sera. Samples with different viral loads were prepared from this main stock by dilution. The prepared controls were delivered to the registered laboratories. The laboratories carried out the relevant tests and entered their results via the MOTAKK web page. External quality assessment (EQA) reports of the participants were uploaded to the website as well. In total, there were 23 participating laboratories, out of which 20 exclusively performed HCV genotyping, and 15 and 16 only performed HDV RNA in 2015 and 2016, respectively. The success rate of the results of the HCV genotype was 56-96% in 2015 and 30-95% in 2016. The tube with a 30% success rate had a recombinant type of HCV, therefore, it could not be detected in most of the laboratories. The HDV RNA results were evaluated qualitatively. Accordingly, HDV RNA detection rates of participant laboratories were 71-100% in 2015 and 50-100% in 2016. 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The tube with a 30% success rate had a recombinant type of HCV, therefore, it could not be detected in most of the laboratories. The HDV RNA results were evaluated qualitatively. Accordingly, HDV RNA detection rates of participant laboratories were 71-100% in 2015 and 50-100% in 2016. 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standards</topic><topic>Hepacivirus - genetics</topic><topic>Hepatitis C virus</topic><topic>Hepatitis C, Chronic - blood</topic><topic>Hepatitis C, Chronic - virology</topic><topic>Hepatitis D, Chronic - blood</topic><topic>Hepatitis D, Chronic - virology</topic><topic>Hepatitis Delta Virus - genetics</topic><topic>Humans</topic><topic>Microbiology</topic><topic>Original</topic><topic>Program Evaluation</topic><topic>Quality Assurance, Health Care - standards</topic><topic>Quality Control</topic><topic>RNA</topic><topic>RNA, Viral - blood</topic><topic>Translation (Languages)</topic><topic>Turkey</topic><topic>Viral Load - methods</topic><topic>Viral Load - standards</topic><topic>Web sites (World Wide Web)</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Karataylı, Ersin</creatorcontrib><creatorcontrib>Soydemir, Ege</creatorcontrib><creatorcontrib>Aksoy, Zeynep Büşra</creatorcontrib><creatorcontrib>Kızılpınar, Mehtap</creatorcontrib><creatorcontrib>Altay Koçak, Aylin</creatorcontrib><creatorcontrib>Karataylı, Senem Ceren</creatorcontrib><creatorcontrib>Yurdcu, Esra</creatorcontrib><creatorcontrib>Yıldırım, Umut</creatorcontrib><creatorcontrib>Güriz, Haluk</creatorcontrib><creatorcontrib>Bozdayı, Gülendam</creatorcontrib><creatorcontrib>Yurdaydın, Cihan</creatorcontrib><creatorcontrib>İlhan, Osman</creatorcontrib><creatorcontrib>Yıldırım, Yasin</creatorcontrib><creatorcontrib>Hdv Study Group, Motakk Hcv Genotype And</creatorcontrib><creatorcontrib>Bozdayı, A Mithat</creatorcontrib><creatorcontrib>Department of Haemotology, Therapeutic Apheresis Center, Ankara University School of Medicine, Ankara, Turkey</creatorcontrib><creatorcontrib>Hepatology Institute, Ankara University, Ankara, Turkey</creatorcontrib><creatorcontrib>Hepatology Institute, Ankara University, Ankara, Turkey;Department of Medical Microbiology, Baskent University School of Medicine, Ankara, Turkey</creatorcontrib><creatorcontrib>Department of Medical Microbiology, Gazi University School of Medicine, Ankara, Turkey</creatorcontrib><creatorcontrib>Biotechnology Institute, Ankara University, Ankara, Turkey</creatorcontrib><creatorcontrib>Tomurcuk Technology, Cyberpark, Bilkent, Ankara, Turkey</creatorcontrib><creatorcontrib>Cebeci Central Laboratory, Ankara University School of Medicine, Ankara, Turkey</creatorcontrib><creatorcontrib>Department of Gastroenterology, Ankara University School of Medicine, Ankara, Turkey</creatorcontrib><creatorcontrib>Department of Haemotology, Ankara University School of Medicine, Ankara, Turkey</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Academic OneFile</collection><collection>MEDLINE - 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subjects Genotypes
Genotyping Techniques - standards
Hepacivirus - genetics
Hepatitis C virus
Hepatitis C, Chronic - blood
Hepatitis C, Chronic - virology
Hepatitis D, Chronic - blood
Hepatitis D, Chronic - virology
Hepatitis Delta Virus - genetics
Humans
Microbiology
Original
Program Evaluation
Quality Assurance, Health Care - standards
Quality Control
RNA
RNA, Viral - blood
Translation (Languages)
Turkey
Viral Load - methods
Viral Load - standards
Web sites (World Wide Web)
title Evaluation of the results of MOTAKK hepatitis C virus RNA genotyping and hepatitis delta virus external quality assessment programs during 2015-2016
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