An evaluation of the SureID 23comp Human Identification Kit for kinship testing
Short tandem repeat (STR) profiling has been routinely used in kinship testing since the introduction of commercial kits in the mid-1990s. While 15 to 23 STR loci normally give definitive results in simple kinship testing, additional loci are sometimes required to resolve complex cases. The SureID 2...
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| Veröffentlicht in: | Scientific reports 2019-11, Vol.9 (1), p.16859-12, Article 16859 |
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| creator | Alsafiah, Hussain M. Aljanabi, Ali A. Hadi, Sibte Alturayeif, Saleh S. Goodwin, William |
| description | Short tandem repeat (STR) profiling has been routinely used in kinship testing since the introduction of commercial kits in the mid-1990s. While 15 to 23 STR loci normally give definitive results in simple kinship testing, additional loci are sometimes required to resolve complex cases. The SureID 23comp Human Identification Kit, recently released by Health Gene Technologies (China), multiplexes amelogenin and 22 autosomal STRs, 17 of which are non-CODIS STRs. This enables the profiling of 38–40 loci when used in conjunction with widely used commercial kits. In this study, the kit was evaluated for kinship applications as a supplementary STR kit following the minimum criteria for validation recommended by the European Network of Forensic Science Institutes (ENFSI) and the Scientific Working Group on DNA Analysis Methods (SWGDAM) using 500 samples. Performance was comparable with other commercial kits demonstrating: repeatability and reproducibility; precision (maximum s.d. 0.1048 nt); accuracy, all alleles were within ±0.41 nt compared to the actual sizes; heterozygous peak balances at all loci >68%; stutter ratios ranged from 3.8% to 16.15%; full profiles were generated with 125 pg DNA (95.12% of alleles at 62 pg),; and we found 100% concordance over 5 common STRs with the GlobalFiler kit. |
| doi_str_mv | 10.1038/s41598-019-52838-7 |
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Performance was comparable with other commercial kits demonstrating: repeatability and reproducibility; precision (maximum s.d. 0.1048 nt); accuracy, all alleles were within ±0.41 nt compared to the actual sizes; heterozygous peak balances at all loci >68%; stutter ratios ranged from 3.8% to 16.15%; full profiles were generated with 125 pg DNA (95.12% of alleles at 62 pg),; and we found 100% concordance over 5 common STRs with the GlobalFiler kit.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/s41598-019-52838-7</identifier><identifier>PMID: 31727926</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>38/22 ; 38/77 ; 45/29 ; 631/208/721 ; 631/337/149 ; Alleles ; Amelogenin - genetics ; Deoxyribonucleic acid ; DNA ; DNA - genetics ; Forensic Anthropology - methods ; Forensic Genetics - methods ; Forensic science ; Gene Frequency ; Genetic Loci ; Genome, Human ; Genotyping Techniques - standards ; Heterozygote ; Humanities and Social Sciences ; Humans ; Microsatellite Repeats ; multidisciplinary ; Reproducibility of Results ; Science ; Science (multidisciplinary) ; Short tandem repeats ; Supplies</subject><ispartof>Scientific reports, 2019-11, Vol.9 (1), p.16859-12, Article 16859</ispartof><rights>The Author(s) 2019</rights><rights>2019. 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While 15 to 23 STR loci normally give definitive results in simple kinship testing, additional loci are sometimes required to resolve complex cases. The SureID 23comp Human Identification Kit, recently released by Health Gene Technologies (China), multiplexes amelogenin and 22 autosomal STRs, 17 of which are non-CODIS STRs. This enables the profiling of 38–40 loci when used in conjunction with widely used commercial kits. In this study, the kit was evaluated for kinship applications as a supplementary STR kit following the minimum criteria for validation recommended by the European Network of Forensic Science Institutes (ENFSI) and the Scientific Working Group on DNA Analysis Methods (SWGDAM) using 500 samples. Performance was comparable with other commercial kits demonstrating: repeatability and reproducibility; precision (maximum s.d. 0.1048 nt); accuracy, all alleles were within ±0.41 nt compared to the actual sizes; heterozygous peak balances at all loci >68%; stutter ratios ranged from 3.8% to 16.15%; full profiles were generated with 125 pg DNA (95.12% of alleles at 62 pg),; and we found 100% concordance over 5 common STRs with the GlobalFiler kit.</description><subject>38/22</subject><subject>38/77</subject><subject>45/29</subject><subject>631/208/721</subject><subject>631/337/149</subject><subject>Alleles</subject><subject>Amelogenin - genetics</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA - genetics</subject><subject>Forensic Anthropology - methods</subject><subject>Forensic Genetics - methods</subject><subject>Forensic science</subject><subject>Gene Frequency</subject><subject>Genetic Loci</subject><subject>Genome, Human</subject><subject>Genotyping Techniques - standards</subject><subject>Heterozygote</subject><subject>Humanities and Social Sciences</subject><subject>Humans</subject><subject>Microsatellite Repeats</subject><subject>multidisciplinary</subject><subject>Reproducibility of Results</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><subject>Short tandem repeats</subject><subject>Supplies</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp9kctOHDEQRa0oESDgB1hElthk08HPsb2JhAiEEUgsEtZWjcc9Y9JtD3Y3Uv4eQ_NexBtbrlO3bukidEDJd0q4PiqCSqMbQk0jmea6UZ_QDiNCNowz9vnNexvtl3JD6pHMCGq20DaniinDZjvo6jhifwfdCENIEacWD2uPf4_Zz39ixl3qN_h87CHi-dLHIbTBTeRFGHCbMv4bYlmHDR58GUJc7aEvLXTF7z_du-j67PTPyXlzefVrfnJ82TihxND4ljggzBsihHMODCixdK0CShSXQEEaKoXhyi2YqT9OSK0lLDSRHsBJvot-TLqbcdH7paveMnR2k0MP-Z9NEOz7Sgxru0p3dqbljDJTBb49CeR0O1bztg_F-a6D6NNYLONUUsIEoxU9_IDepDHHut4DJSQ3SutKsYlyOZWSfftihhL7EJmdIrM1MvsYmVW16evbNV5angOqAJ-AUktx5fPr7P_I3gN7-qEk</recordid><startdate>20191114</startdate><enddate>20191114</enddate><creator>Alsafiah, Hussain M.</creator><creator>Aljanabi, Ali A.</creator><creator>Hadi, Sibte</creator><creator>Alturayeif, Saleh S.</creator><creator>Goodwin, William</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-3632-3552</orcidid><orcidid>https://orcid.org/0000-0002-2994-3083</orcidid><orcidid>https://orcid.org/0000-0002-4580-5537</orcidid></search><sort><creationdate>20191114</creationdate><title>An evaluation of the SureID 23comp Human Identification Kit for kinship testing</title><author>Alsafiah, Hussain M. ; 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While 15 to 23 STR loci normally give definitive results in simple kinship testing, additional loci are sometimes required to resolve complex cases. The SureID 23comp Human Identification Kit, recently released by Health Gene Technologies (China), multiplexes amelogenin and 22 autosomal STRs, 17 of which are non-CODIS STRs. This enables the profiling of 38–40 loci when used in conjunction with widely used commercial kits. In this study, the kit was evaluated for kinship applications as a supplementary STR kit following the minimum criteria for validation recommended by the European Network of Forensic Science Institutes (ENFSI) and the Scientific Working Group on DNA Analysis Methods (SWGDAM) using 500 samples. Performance was comparable with other commercial kits demonstrating: repeatability and reproducibility; precision (maximum s.d. 0.1048 nt); accuracy, all alleles were within ±0.41 nt compared to the actual sizes; heterozygous peak balances at all loci >68%; stutter ratios ranged from 3.8% to 16.15%; full profiles were generated with 125 pg DNA (95.12% of alleles at 62 pg),; and we found 100% concordance over 5 common STRs with the GlobalFiler kit.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>31727926</pmid><doi>10.1038/s41598-019-52838-7</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0002-3632-3552</orcidid><orcidid>https://orcid.org/0000-0002-2994-3083</orcidid><orcidid>https://orcid.org/0000-0002-4580-5537</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | 38/22 38/77 45/29 631/208/721 631/337/149 Alleles Amelogenin - genetics Deoxyribonucleic acid DNA DNA - genetics Forensic Anthropology - methods Forensic Genetics - methods Forensic science Gene Frequency Genetic Loci Genome, Human Genotyping Techniques - standards Heterozygote Humanities and Social Sciences Humans Microsatellite Repeats multidisciplinary Reproducibility of Results Science Science (multidisciplinary) Short tandem repeats Supplies |
| title | An evaluation of the SureID 23comp Human Identification Kit for kinship testing |
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