Specific class of intrapartum antibiotics relates to maturation of the infant gut microbiota: a prospective cohort study

Objective To evaluate the potential impact of intrapartum antibiotics, and their specific classes, on the infant gut microbiota in the first year of life. Design Prospective study of infants in the New Hampshire Birth Cohort Study (NHBCS). Settings Rural New Hampshire, USA. Population or sample Two...

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Veröffentlicht in:BJOG : an international journal of obstetrics and gynaecology 2020-01, Vol.127 (2), p.217-227
Hauptverfasser: Coker, MO, Hoen, AG, Dade, E, Lundgren, S, Li, Z, Wong, AD, Zens, MS, Palys, TJ, Morrison, HG, Sogin, ML, Baker, ER, Karagas, MR, Madan, JC
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container_issue 2
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container_title BJOG : an international journal of obstetrics and gynaecology
container_volume 127
creator Coker, MO
Hoen, AG
Dade, E
Lundgren, S
Li, Z
Wong, AD
Zens, MS
Palys, TJ
Morrison, HG
Sogin, ML
Baker, ER
Karagas, MR
Madan, JC
description Objective To evaluate the potential impact of intrapartum antibiotics, and their specific classes, on the infant gut microbiota in the first year of life. Design Prospective study of infants in the New Hampshire Birth Cohort Study (NHBCS). Settings Rural New Hampshire, USA. Population or sample Two hundred and sixty‐six full‐term infants from the NHBCS. Methods Intrapartum antibiotic use during labour and delivery was ed from medical records. Faecal samples collected at 6 weeks and 1 year of age were characterised by 16S rRNA sequencing, and metagenomics analysis in a subset of samples. Exposures Maternal exposure to antibiotics during labour and delivery. Main outcome measure Taxonomic and functional profiles of faecal samples. Results Infant exposure to intrapartum antibiotics, particularly to two or more antibiotic classes, was independently associated with lower microbial diversity scores as well as a unique bacterial community at 6 weeks (GUnifrac, P = 0.02). At 1 year, infants in the penicillin‐only group had significantly lower α diversity scores than infants not exposed to intrapartum antibiotics. Within the first year of life, intrapartum exposure to penicillins was related to a significantly lower increase in several taxa including Bacteroides, use of cephalosporins was associated with a significantly lower rise over time in Bifidobacterium and infants in the multi‐class group experienced a significantly higher increase in Veillonella dispar. Conclusions Our findings suggest that intrapartum antibiotics alter the developmental trajectory of the infant gut microbiome, and specific antibiotic types may impact community composition, diversity and keystone immune training taxa. Tweetable Class of intrapartum antibiotics administered during delivery relates to maturation of infant gut microbiota. Tweetable Class of intrapartum antibiotics administered during delivery relates to maturation of infant gut microbiota.
doi_str_mv 10.1111/1471-0528.15799
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Design Prospective study of infants in the New Hampshire Birth Cohort Study (NHBCS). Settings Rural New Hampshire, USA. Population or sample Two hundred and sixty‐six full‐term infants from the NHBCS. Methods Intrapartum antibiotic use during labour and delivery was ed from medical records. Faecal samples collected at 6 weeks and 1 year of age were characterised by 16S rRNA sequencing, and metagenomics analysis in a subset of samples. Exposures Maternal exposure to antibiotics during labour and delivery. Main outcome measure Taxonomic and functional profiles of faecal samples. Results Infant exposure to intrapartum antibiotics, particularly to two or more antibiotic classes, was independently associated with lower microbial diversity scores as well as a unique bacterial community at 6 weeks (GUnifrac, P = 0.02). At 1 year, infants in the penicillin‐only group had significantly lower α diversity scores than infants not exposed to intrapartum antibiotics. Within the first year of life, intrapartum exposure to penicillins was related to a significantly lower increase in several taxa including Bacteroides, use of cephalosporins was associated with a significantly lower rise over time in Bifidobacterium and infants in the multi‐class group experienced a significantly higher increase in Veillonella dispar. Conclusions Our findings suggest that intrapartum antibiotics alter the developmental trajectory of the infant gut microbiome, and specific antibiotic types may impact community composition, diversity and keystone immune training taxa. Tweetable Class of intrapartum antibiotics administered during delivery relates to maturation of infant gut microbiota. 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Design Prospective study of infants in the New Hampshire Birth Cohort Study (NHBCS). Settings Rural New Hampshire, USA. Population or sample Two hundred and sixty‐six full‐term infants from the NHBCS. Methods Intrapartum antibiotic use during labour and delivery was ed from medical records. Faecal samples collected at 6 weeks and 1 year of age were characterised by 16S rRNA sequencing, and metagenomics analysis in a subset of samples. Exposures Maternal exposure to antibiotics during labour and delivery. Main outcome measure Taxonomic and functional profiles of faecal samples. Results Infant exposure to intrapartum antibiotics, particularly to two or more antibiotic classes, was independently associated with lower microbial diversity scores as well as a unique bacterial community at 6 weeks (GUnifrac, P = 0.02). At 1 year, infants in the penicillin‐only group had significantly lower α diversity scores than infants not exposed to intrapartum antibiotics. Within the first year of life, intrapartum exposure to penicillins was related to a significantly lower increase in several taxa including Bacteroides, use of cephalosporins was associated with a significantly lower rise over time in Bifidobacterium and infants in the multi‐class group experienced a significantly higher increase in Veillonella dispar. Conclusions Our findings suggest that intrapartum antibiotics alter the developmental trajectory of the infant gut microbiome, and specific antibiotic types may impact community composition, diversity and keystone immune training taxa. Tweetable Class of intrapartum antibiotics administered during delivery relates to maturation of infant gut microbiota. 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Design Prospective study of infants in the New Hampshire Birth Cohort Study (NHBCS). Settings Rural New Hampshire, USA. Population or sample Two hundred and sixty‐six full‐term infants from the NHBCS. Methods Intrapartum antibiotic use during labour and delivery was ed from medical records. Faecal samples collected at 6 weeks and 1 year of age were characterised by 16S rRNA sequencing, and metagenomics analysis in a subset of samples. Exposures Maternal exposure to antibiotics during labour and delivery. Main outcome measure Taxonomic and functional profiles of faecal samples. Results Infant exposure to intrapartum antibiotics, particularly to two or more antibiotic classes, was independently associated with lower microbial diversity scores as well as a unique bacterial community at 6 weeks (GUnifrac, P = 0.02). At 1 year, infants in the penicillin‐only group had significantly lower α diversity scores than infants not exposed to intrapartum antibiotics. Within the first year of life, intrapartum exposure to penicillins was related to a significantly lower increase in several taxa including Bacteroides, use of cephalosporins was associated with a significantly lower rise over time in Bifidobacterium and infants in the multi‐class group experienced a significantly higher increase in Veillonella dispar. Conclusions Our findings suggest that intrapartum antibiotics alter the developmental trajectory of the infant gut microbiome, and specific antibiotic types may impact community composition, diversity and keystone immune training taxa. Tweetable Class of intrapartum antibiotics administered during delivery relates to maturation of infant gut microbiota. Tweetable Class of intrapartum antibiotics administered during delivery relates to maturation of infant gut microbiota.</abstract><cop>England</cop><pmid>31006170</pmid><doi>10.1111/1471-0528.15799</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record>
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subjects Antibiotic Prophylaxis
Bacteroides - growth & development
Bacteroidetes
beta-Lactamases
Bifidobacterium
Feces - microbiology
Female
Gastrointestinal Microbiome - drug effects
Gut
Humans
infant
Infant, Newborn
intestinal microbiota
intrapartum antibiotics
Lactobacillus
Maternal Exposure
Mothers
neonate
Pregnancy
Prospective Studies
RNA, Ribosomal, 16S
Sequence Analysis, RNA
Term Birth
Vagina - microbiology
title Specific class of intrapartum antibiotics relates to maturation of the infant gut microbiota: a prospective cohort study
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