IFNL3 genotype is associated with pulmonary fibrosis in patients with systemic sclerosis
Fibrosis across different organs and tissues is likely to share common pathophysiological mechanisms and pathways. Recently, a polymorphism (rs12979860) near the interferon lambda gene ( IFNL3 ) was shown to be associated with fibrosis in liver across multiple disease etiologies. We determined wheth...
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creator | Metwally, Mayada Thabet, Khaled Bayoumi, Ali Nikpour, Mandana Stevens, Wendy Sahhar, Joanne Zochling, Jane Roddy, Janet Tymms, Kathleen Strickland, Gemma Lester, Susan Rischmueller, Maureen Ngian, Gene-Siew Walker, Jennifer Hissaria, Pravin Shaker, Olfat Liddle, Christopher Manolios, Nicholas Beretta, Lorenzo Proudman, Susanna George, Jacob Eslam, Mohammed |
description | Fibrosis across different organs and tissues is likely to share common pathophysiological mechanisms and pathways. Recently, a polymorphism (rs12979860) near the interferon lambda gene (
IFNL3
) was shown to be associated with fibrosis in liver across multiple disease etiologies. We determined whether this variant is a risk factor for pulmonary fibrosis (PF) and worsening cutaneous fibrosis in systemic sclerosis (SSc). Caucasian patients with SSc (n = 733) were genotyped to test for association with the presence of PF and worsening of skin fibrosis. Serum IFN-λ3 levels from 200 SSc cases were evaluated. An association of the
IFNL3
polymorphism with PF was demonstrated (OR: 1.66 (95% CI: 1.142–2.416, p = 0.008). The
IFNL3
variant was not a risk factor for worsening of skin fibrosis. Functionally, IFN-λ3 serum levels were higher among subjects with PF compared to those unaffected (P |
doi_str_mv | 10.1038/s41598-019-50709-9 |
format | Article |
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IFNL3
) was shown to be associated with fibrosis in liver across multiple disease etiologies. We determined whether this variant is a risk factor for pulmonary fibrosis (PF) and worsening cutaneous fibrosis in systemic sclerosis (SSc). Caucasian patients with SSc (n = 733) were genotyped to test for association with the presence of PF and worsening of skin fibrosis. Serum IFN-λ3 levels from 200 SSc cases were evaluated. An association of the
IFNL3
polymorphism with PF was demonstrated (OR: 1.66 (95% CI: 1.142–2.416, p = 0.008). The
IFNL3
variant was not a risk factor for worsening of skin fibrosis. Functionally, IFN-λ3 serum levels were higher among subjects with PF compared to those unaffected (P < 0.0001). In conclusion, IFNL3 serum levels and the genetic variant known to be associated with liver fibrosis are similarly linked to PF, but not to worsening of skin fibrosis in SSc. These data highlight both common fibrosis pathways operating between organs, as well as differential effects within the same disease.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/s41598-019-50709-9</identifier><identifier>PMID: 31619697</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>42/41 ; 45/22 ; 45/90 ; 64/60 ; 692/308/2056 ; 692/308/575 ; Aged ; Female ; Fibrosis ; Gene polymorphism ; Genetic diversity ; Genetic Predisposition to Disease ; Genetic variance ; Humanities and Social Sciences ; Humans ; Interferon ; Interferons - blood ; Interferons - genetics ; Liver Cirrhosis - genetics ; Liver Cirrhosis - metabolism ; Liver diseases ; Lung diseases ; Male ; Middle Aged ; multidisciplinary ; Polymorphism ; Polymorphism, Single Nucleotide ; Pulmonary fibrosis ; Pulmonary Fibrosis - genetics ; Pulmonary Fibrosis - metabolism ; Risk factors ; Science ; Science (multidisciplinary) ; Scleroderma ; Scleroderma, Systemic - genetics ; Scleroderma, Systemic - metabolism ; Serum levels ; Skin ; Skin - pathology ; Systemic sclerosis</subject><ispartof>Scientific reports, 2019-10, Vol.9 (1), p.14834-5, Article 14834</ispartof><rights>The Author(s) 2019</rights><rights>2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c474t-cd96bea6fab25058a30cc074a32a7c6ea7da659703f92e9fe18369e824813813</citedby><cites>FETCH-LOGICAL-c474t-cd96bea6fab25058a30cc074a32a7c6ea7da659703f92e9fe18369e824813813</cites><orcidid>0000-0003-3936-6790 ; 0000-0002-3031-3599 ; 0000-0002-8421-5476</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6795812/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6795812/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,27901,27902,41096,42165,51551,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31619697$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Metwally, Mayada</creatorcontrib><creatorcontrib>Thabet, Khaled</creatorcontrib><creatorcontrib>Bayoumi, Ali</creatorcontrib><creatorcontrib>Nikpour, Mandana</creatorcontrib><creatorcontrib>Stevens, Wendy</creatorcontrib><creatorcontrib>Sahhar, Joanne</creatorcontrib><creatorcontrib>Zochling, Jane</creatorcontrib><creatorcontrib>Roddy, Janet</creatorcontrib><creatorcontrib>Tymms, Kathleen</creatorcontrib><creatorcontrib>Strickland, Gemma</creatorcontrib><creatorcontrib>Lester, Susan</creatorcontrib><creatorcontrib>Rischmueller, Maureen</creatorcontrib><creatorcontrib>Ngian, Gene-Siew</creatorcontrib><creatorcontrib>Walker, Jennifer</creatorcontrib><creatorcontrib>Hissaria, Pravin</creatorcontrib><creatorcontrib>Shaker, Olfat</creatorcontrib><creatorcontrib>Liddle, Christopher</creatorcontrib><creatorcontrib>Manolios, Nicholas</creatorcontrib><creatorcontrib>Beretta, Lorenzo</creatorcontrib><creatorcontrib>Proudman, Susanna</creatorcontrib><creatorcontrib>George, Jacob</creatorcontrib><creatorcontrib>Eslam, Mohammed</creatorcontrib><title>IFNL3 genotype is associated with pulmonary fibrosis in patients with systemic sclerosis</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>Fibrosis across different organs and tissues is likely to share common pathophysiological mechanisms and pathways. Recently, a polymorphism (rs12979860) near the interferon lambda gene (
IFNL3
) was shown to be associated with fibrosis in liver across multiple disease etiologies. We determined whether this variant is a risk factor for pulmonary fibrosis (PF) and worsening cutaneous fibrosis in systemic sclerosis (SSc). Caucasian patients with SSc (n = 733) were genotyped to test for association with the presence of PF and worsening of skin fibrosis. Serum IFN-λ3 levels from 200 SSc cases were evaluated. An association of the
IFNL3
polymorphism with PF was demonstrated (OR: 1.66 (95% CI: 1.142–2.416, p = 0.008). The
IFNL3
variant was not a risk factor for worsening of skin fibrosis. Functionally, IFN-λ3 serum levels were higher among subjects with PF compared to those unaffected (P < 0.0001). In conclusion, IFNL3 serum levels and the genetic variant known to be associated with liver fibrosis are similarly linked to PF, but not to worsening of skin fibrosis in SSc. These data highlight both common fibrosis pathways operating between organs, as well as differential effects within the same disease.</description><subject>42/41</subject><subject>45/22</subject><subject>45/90</subject><subject>64/60</subject><subject>692/308/2056</subject><subject>692/308/575</subject><subject>Aged</subject><subject>Female</subject><subject>Fibrosis</subject><subject>Gene polymorphism</subject><subject>Genetic diversity</subject><subject>Genetic Predisposition to Disease</subject><subject>Genetic variance</subject><subject>Humanities and Social Sciences</subject><subject>Humans</subject><subject>Interferon</subject><subject>Interferons - blood</subject><subject>Interferons - genetics</subject><subject>Liver Cirrhosis - genetics</subject><subject>Liver Cirrhosis - metabolism</subject><subject>Liver diseases</subject><subject>Lung diseases</subject><subject>Male</subject><subject>Middle Aged</subject><subject>multidisciplinary</subject><subject>Polymorphism</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Pulmonary fibrosis</subject><subject>Pulmonary Fibrosis - genetics</subject><subject>Pulmonary Fibrosis - metabolism</subject><subject>Risk factors</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><subject>Scleroderma</subject><subject>Scleroderma, Systemic - genetics</subject><subject>Scleroderma, Systemic - metabolism</subject><subject>Serum levels</subject><subject>Skin</subject><subject>Skin - pathology</subject><subject>Systemic sclerosis</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp9kU1P3DAQhi1UxK6AP8ABReLSS4o_Yju-IFWoUKQVXDhws7zeya5REodM0mr_PWZD6bYHLEseaZ55Z8YvIWeMfmNUlJdYMGnKnDKTS6qpyc0BmXNayJwLzr_sxTNyivhM05HcFMwckZlgihll9Jw83d3cL0S2hjYO2w6ygJlDjD64AVbZ7zBssm6sm9i6fptVYdlHTEhos84NAdoBJwa3OEATfIa-hh1zQg4rVyOcvr_H5PHmx-P1z3zxcHt3_X2R-0IXQ-5XRi3BqcotuaSydIJ6T3XhBHfaK3B65ZQ0morKcDAVsFIoAyUvSibSPSZXk2w3LhtY-TRS72rb9aFJE9vogv0304aNXcdfVmkjS8aTwNd3gT6-jICDbQJ6qGvXQhzRckGVpFSbt14X_6HPcezbtN2O4okqaaL4RPn0D9hD9TEMo_bNOjtZZ5N1dmedNanofH-Nj5I_RiVATACmVLuG_m_vT2RfAcyEpW0</recordid><startdate>20191016</startdate><enddate>20191016</enddate><creator>Metwally, Mayada</creator><creator>Thabet, Khaled</creator><creator>Bayoumi, Ali</creator><creator>Nikpour, Mandana</creator><creator>Stevens, Wendy</creator><creator>Sahhar, Joanne</creator><creator>Zochling, Jane</creator><creator>Roddy, Janet</creator><creator>Tymms, Kathleen</creator><creator>Strickland, Gemma</creator><creator>Lester, Susan</creator><creator>Rischmueller, Maureen</creator><creator>Ngian, Gene-Siew</creator><creator>Walker, Jennifer</creator><creator>Hissaria, Pravin</creator><creator>Shaker, Olfat</creator><creator>Liddle, Christopher</creator><creator>Manolios, Nicholas</creator><creator>Beretta, Lorenzo</creator><creator>Proudman, Susanna</creator><creator>George, Jacob</creator><creator>Eslam, Mohammed</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-3936-6790</orcidid><orcidid>https://orcid.org/0000-0002-3031-3599</orcidid><orcidid>https://orcid.org/0000-0002-8421-5476</orcidid></search><sort><creationdate>20191016</creationdate><title>IFNL3 genotype is associated with pulmonary fibrosis in patients with systemic sclerosis</title><author>Metwally, Mayada ; Thabet, Khaled ; Bayoumi, Ali ; Nikpour, Mandana ; Stevens, Wendy ; Sahhar, Joanne ; Zochling, Jane ; Roddy, Janet ; Tymms, Kathleen ; Strickland, Gemma ; Lester, Susan ; Rischmueller, Maureen ; Ngian, Gene-Siew ; Walker, Jennifer ; Hissaria, Pravin ; Shaker, Olfat ; Liddle, Christopher ; Manolios, Nicholas ; Beretta, Lorenzo ; Proudman, Susanna ; George, Jacob ; Eslam, Mohammed</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c474t-cd96bea6fab25058a30cc074a32a7c6ea7da659703f92e9fe18369e824813813</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>42/41</topic><topic>45/22</topic><topic>45/90</topic><topic>64/60</topic><topic>692/308/2056</topic><topic>692/308/575</topic><topic>Aged</topic><topic>Female</topic><topic>Fibrosis</topic><topic>Gene polymorphism</topic><topic>Genetic diversity</topic><topic>Genetic Predisposition to Disease</topic><topic>Genetic variance</topic><topic>Humanities and Social Sciences</topic><topic>Humans</topic><topic>Interferon</topic><topic>Interferons - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Scientific reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Metwally, Mayada</au><au>Thabet, Khaled</au><au>Bayoumi, Ali</au><au>Nikpour, Mandana</au><au>Stevens, Wendy</au><au>Sahhar, Joanne</au><au>Zochling, Jane</au><au>Roddy, Janet</au><au>Tymms, Kathleen</au><au>Strickland, Gemma</au><au>Lester, Susan</au><au>Rischmueller, Maureen</au><au>Ngian, Gene-Siew</au><au>Walker, Jennifer</au><au>Hissaria, Pravin</au><au>Shaker, Olfat</au><au>Liddle, Christopher</au><au>Manolios, Nicholas</au><au>Beretta, Lorenzo</au><au>Proudman, Susanna</au><au>George, Jacob</au><au>Eslam, Mohammed</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>IFNL3 genotype is associated with pulmonary fibrosis in patients with systemic sclerosis</atitle><jtitle>Scientific reports</jtitle><stitle>Sci Rep</stitle><addtitle>Sci Rep</addtitle><date>2019-10-16</date><risdate>2019</risdate><volume>9</volume><issue>1</issue><spage>14834</spage><epage>5</epage><pages>14834-5</pages><artnum>14834</artnum><issn>2045-2322</issn><eissn>2045-2322</eissn><abstract>Fibrosis across different organs and tissues is likely to share common pathophysiological mechanisms and pathways. Recently, a polymorphism (rs12979860) near the interferon lambda gene (
IFNL3
) was shown to be associated with fibrosis in liver across multiple disease etiologies. We determined whether this variant is a risk factor for pulmonary fibrosis (PF) and worsening cutaneous fibrosis in systemic sclerosis (SSc). Caucasian patients with SSc (n = 733) were genotyped to test for association with the presence of PF and worsening of skin fibrosis. Serum IFN-λ3 levels from 200 SSc cases were evaluated. An association of the
IFNL3
polymorphism with PF was demonstrated (OR: 1.66 (95% CI: 1.142–2.416, p = 0.008). The
IFNL3
variant was not a risk factor for worsening of skin fibrosis. Functionally, IFN-λ3 serum levels were higher among subjects with PF compared to those unaffected (P < 0.0001). In conclusion, IFNL3 serum levels and the genetic variant known to be associated with liver fibrosis are similarly linked to PF, but not to worsening of skin fibrosis in SSc. These data highlight both common fibrosis pathways operating between organs, as well as differential effects within the same disease.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>31619697</pmid><doi>10.1038/s41598-019-50709-9</doi><tpages>5</tpages><orcidid>https://orcid.org/0000-0003-3936-6790</orcidid><orcidid>https://orcid.org/0000-0002-3031-3599</orcidid><orcidid>https://orcid.org/0000-0002-8421-5476</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 42/41 45/22 45/90 64/60 692/308/2056 692/308/575 Aged Female Fibrosis Gene polymorphism Genetic diversity Genetic Predisposition to Disease Genetic variance Humanities and Social Sciences Humans Interferon Interferons - blood Interferons - genetics Liver Cirrhosis - genetics Liver Cirrhosis - metabolism Liver diseases Lung diseases Male Middle Aged multidisciplinary Polymorphism Polymorphism, Single Nucleotide Pulmonary fibrosis Pulmonary Fibrosis - genetics Pulmonary Fibrosis - metabolism Risk factors Science Science (multidisciplinary) Scleroderma Scleroderma, Systemic - genetics Scleroderma, Systemic - metabolism Serum levels Skin Skin - pathology Systemic sclerosis |
title | IFNL3 genotype is associated with pulmonary fibrosis in patients with systemic sclerosis |
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