Hibernation induces widespread transcriptional remodeling in metabolic tissues of the grizzly bear
Revealing the mechanisms underlying the reversible physiology of hibernation could have applications to both human and animal health as hibernation is often associated with disease-like states. The present study uses RNA-sequencing to reveal the tissue and seasonal transcriptional changes occurring...
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creator | Jansen, Heiko T. Trojahn, Shawn Saxton, Michael W. Quackenbush, Corey R. Evans Hutzenbiler, Brandon D. Nelson, O. Lynne Cornejo, Omar E. Robbins, Charles T. Kelley, Joanna L. |
description | Revealing the mechanisms underlying the reversible physiology of hibernation could have applications to both human and animal health as hibernation is often associated with disease-like states. The present study uses RNA-sequencing to reveal the tissue and seasonal transcriptional changes occurring in grizzly bears (
Ursus arctos horribilis
). Comparing hibernation to other seasons, bear adipose has a greater number of differentially expressed genes than liver and skeletal muscle. During hyperphagia, adipose has more than 900 differentially expressed genes compared to active season. Hibernation is characterized by reduced expression of genes associated with insulin signaling, muscle protein degradation, and urea production, and increased expression within muscle protein anabolic pathways. Across all three tissues we find a subset of shared differentially expressed genes, some of which are uncharacterized, that together may reflect a common regulatory mechanism. The identified gene families could be useful for developing novel therapeutics to treat human and animal diseases.
Jansen, Trojahn, Saxton, et al. examine the transcriptional changes that occur during the seasonal cycle in grizzly bears. They find that during hibernation, adipose tissue has the largest number of differentially expressed genes of the three tissues examined, revealing potential therapeutic targets for human diseases. |
doi_str_mv | 10.1038/s42003-019-0574-4 |
format | Article |
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Ursus arctos horribilis
). Comparing hibernation to other seasons, bear adipose has a greater number of differentially expressed genes than liver and skeletal muscle. During hyperphagia, adipose has more than 900 differentially expressed genes compared to active season. Hibernation is characterized by reduced expression of genes associated with insulin signaling, muscle protein degradation, and urea production, and increased expression within muscle protein anabolic pathways. Across all three tissues we find a subset of shared differentially expressed genes, some of which are uncharacterized, that together may reflect a common regulatory mechanism. The identified gene families could be useful for developing novel therapeutics to treat human and animal diseases.
Jansen, Trojahn, Saxton, et al. examine the transcriptional changes that occur during the seasonal cycle in grizzly bears. They find that during hibernation, adipose tissue has the largest number of differentially expressed genes of the three tissues examined, revealing potential therapeutic targets for human diseases.</description><identifier>ISSN: 2399-3642</identifier><identifier>EISSN: 2399-3642</identifier><identifier>DOI: 10.1038/s42003-019-0574-4</identifier><identifier>PMID: 31531397</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>38/39 ; 38/90 ; 38/91 ; 631/208 ; 631/208/199 ; 631/208/200 ; 631/208/212 ; 631/601/1737 ; Adipose tissue ; Animal diseases ; Animals ; Bears ; Biology ; Biomedical and Life Sciences ; Energy Metabolism ; Gene Expression Profiling ; Gene families ; Hibernation ; Hibernation - genetics ; Hyperphagia ; Insulin ; Life Sciences ; Organ Specificity ; Ribonucleic acid ; RNA ; Skeletal muscle ; Therapeutic applications ; Transcription ; Transcriptome ; Urea ; Ursidae - physiology</subject><ispartof>Communications biology, 2019-09, Vol.2 (1), p.336-336, Article 336</ispartof><rights>The Author(s) 2019</rights><rights>The Author(s) 2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c536t-6cc783e008c50374b1b070bac82118d21e802e245a575b644678cfc76a74f5843</citedby><cites>FETCH-LOGICAL-c536t-6cc783e008c50374b1b070bac82118d21e802e245a575b644678cfc76a74f5843</cites><orcidid>0000-0003-3083-1043 ; 0000-0002-7731-605X ; 0000-0003-0178-396X ; 0000-0002-5384-6793</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6744400/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6744400/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,27901,27902,41096,42165,51551,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31531397$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jansen, Heiko T.</creatorcontrib><creatorcontrib>Trojahn, Shawn</creatorcontrib><creatorcontrib>Saxton, Michael W.</creatorcontrib><creatorcontrib>Quackenbush, Corey R.</creatorcontrib><creatorcontrib>Evans Hutzenbiler, Brandon D.</creatorcontrib><creatorcontrib>Nelson, O. Lynne</creatorcontrib><creatorcontrib>Cornejo, Omar E.</creatorcontrib><creatorcontrib>Robbins, Charles T.</creatorcontrib><creatorcontrib>Kelley, Joanna L.</creatorcontrib><title>Hibernation induces widespread transcriptional remodeling in metabolic tissues of the grizzly bear</title><title>Communications biology</title><addtitle>Commun Biol</addtitle><addtitle>Commun Biol</addtitle><description>Revealing the mechanisms underlying the reversible physiology of hibernation could have applications to both human and animal health as hibernation is often associated with disease-like states. The present study uses RNA-sequencing to reveal the tissue and seasonal transcriptional changes occurring in grizzly bears (
Ursus arctos horribilis
). Comparing hibernation to other seasons, bear adipose has a greater number of differentially expressed genes than liver and skeletal muscle. During hyperphagia, adipose has more than 900 differentially expressed genes compared to active season. Hibernation is characterized by reduced expression of genes associated with insulin signaling, muscle protein degradation, and urea production, and increased expression within muscle protein anabolic pathways. Across all three tissues we find a subset of shared differentially expressed genes, some of which are uncharacterized, that together may reflect a common regulatory mechanism. The identified gene families could be useful for developing novel therapeutics to treat human and animal diseases.
Jansen, Trojahn, Saxton, et al. examine the transcriptional changes that occur during the seasonal cycle in grizzly bears. They find that during hibernation, adipose tissue has the largest number of differentially expressed genes of the three tissues examined, revealing potential therapeutic targets for human diseases.</description><subject>38/39</subject><subject>38/90</subject><subject>38/91</subject><subject>631/208</subject><subject>631/208/199</subject><subject>631/208/200</subject><subject>631/208/212</subject><subject>631/601/1737</subject><subject>Adipose tissue</subject><subject>Animal diseases</subject><subject>Animals</subject><subject>Bears</subject><subject>Biology</subject><subject>Biomedical and Life Sciences</subject><subject>Energy Metabolism</subject><subject>Gene Expression Profiling</subject><subject>Gene families</subject><subject>Hibernation</subject><subject>Hibernation - genetics</subject><subject>Hyperphagia</subject><subject>Insulin</subject><subject>Life Sciences</subject><subject>Organ Specificity</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>Skeletal muscle</subject><subject>Therapeutic applications</subject><subject>Transcription</subject><subject>Transcriptome</subject><subject>Urea</subject><subject>Ursidae - physiology</subject><issn>2399-3642</issn><issn>2399-3642</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp1kU1LHTEUhkOxVLn1B3RTAt10MzZfk2Q2QhGtguDGrkOSOXONZCa3yYyiv95crlVbcJVAnnNy3vMg9IWSI0q4_lEEI4Q3hHYNaZVoxAd0wHjXNVwKtvfmvo8OS7klpJJdJ7n4hPY5bTnlnTpA7jw4yJOdQ5pwmPrFQ8H3oYeyyWB7PGc7FZ_DZgvYiDOMqYcYpnWl8QizdSkGj-dQylJL04DnG8DrHB4f4wN2YPNn9HGwscDh87lCv89Or0_Om8urXxcnPy8b33I5N9J7pTkQon1LuBKOOqKIs14zSnXPKGjCgInWtqp1UgiptB-8klaJodWCr9Dxru9mcSP0HqY6fDSbHEabH0yywfz7MoUbs053RiohRN3lCn1_bpDTnxpmNmMoHmK0E6SlGMY6TojSjFX023_obVrqGmOluO6kklqpStEd5XMqJcPwMgwlZivR7CSaqsZsJZptiq9vU7xU_FVWAbYDqqGqAfLr1-93fQKSwKiK</recordid><startdate>20190913</startdate><enddate>20190913</enddate><creator>Jansen, Heiko T.</creator><creator>Trojahn, Shawn</creator><creator>Saxton, Michael W.</creator><creator>Quackenbush, Corey R.</creator><creator>Evans Hutzenbiler, Brandon D.</creator><creator>Nelson, O. 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Ursus arctos horribilis
). Comparing hibernation to other seasons, bear adipose has a greater number of differentially expressed genes than liver and skeletal muscle. During hyperphagia, adipose has more than 900 differentially expressed genes compared to active season. Hibernation is characterized by reduced expression of genes associated with insulin signaling, muscle protein degradation, and urea production, and increased expression within muscle protein anabolic pathways. Across all three tissues we find a subset of shared differentially expressed genes, some of which are uncharacterized, that together may reflect a common regulatory mechanism. The identified gene families could be useful for developing novel therapeutics to treat human and animal diseases.
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subjects | 38/39 38/90 38/91 631/208 631/208/199 631/208/200 631/208/212 631/601/1737 Adipose tissue Animal diseases Animals Bears Biology Biomedical and Life Sciences Energy Metabolism Gene Expression Profiling Gene families Hibernation Hibernation - genetics Hyperphagia Insulin Life Sciences Organ Specificity Ribonucleic acid RNA Skeletal muscle Therapeutic applications Transcription Transcriptome Urea Ursidae - physiology |
title | Hibernation induces widespread transcriptional remodeling in metabolic tissues of the grizzly bear |
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