Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage

Background Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity. N...

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Veröffentlicht in:Translational respiratory medicine 2013-08, Vol.1 (1), p.14-14, Article 14
Hauptverfasser: Malm, Johan, Fehniger, Thomas E, Danmyr, Pia, Végvári, Ákos, Welinder, Charlotte, Lindberg, Henrik, Upton, Paul, Carter, Stephanie, Appelqvist, Roger, Sjödin, Karin, Wieslander, Elisabet, Dahlbäck, Magnus, Rezeli, Melinda, Erlinge, David, Marko-Varga, György
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container_end_page 14
container_issue 1
container_start_page 14
container_title Translational respiratory medicine
container_volume 1
creator Malm, Johan
Fehniger, Thomas E
Danmyr, Pia
Végvári, Ákos
Welinder, Charlotte
Lindberg, Henrik
Upton, Paul
Carter, Stephanie
Appelqvist, Roger
Sjödin, Karin
Wieslander, Elisabet
Dahlbäck, Magnus
Rezeli, Melinda
Erlinge, David
Marko-Varga, György
description Background Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity. New procedures that better preserve sample integrity and reduce degradation are being developed to meet the needs of both present and future biobanking. Hereby we present an automatic sample workflow scheme that is designed to handle high numbers of blood samples. Methods Blood fractions are aliquoted, heat sealed using novel technology, and stored in 384 tube high-density sample arrays. Results The newly developed 384 biobank rack system is especially suited for preserving identical small aliquots. We provide data on robotic processing of clinical samples at −80°C, following initial processing, analysis and shipping between laboratories throughout Europe. Subsequent to unpacking, re-sorting, and storage at these sites, the samples have been returned for analysis. Biomarker analysis of 13 common tests in the clinical chemistry unit of the hospital provides evidence of qualitative and stable logistics using the 384-sample tube system. Conclusions This technology development allows rapid access to a given sample in the frozen archive while maintaining individual sample integrity with sample tube confinement and quality management.
doi_str_mv 10.1186/2213-0802-1-14
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The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity. New procedures that better preserve sample integrity and reduce degradation are being developed to meet the needs of both present and future biobanking. Hereby we present an automatic sample workflow scheme that is designed to handle high numbers of blood samples. Methods Blood fractions are aliquoted, heat sealed using novel technology, and stored in 384 tube high-density sample arrays. Results The newly developed 384 biobank rack system is especially suited for preserving identical small aliquots. We provide data on robotic processing of clinical samples at −80°C, following initial processing, analysis and shipping between laboratories throughout Europe. Subsequent to unpacking, re-sorting, and storage at these sites, the samples have been returned for analysis. Biomarker analysis of 13 common tests in the clinical chemistry unit of the hospital provides evidence of qualitative and stable logistics using the 384-sample tube system. Conclusions This technology development allows rapid access to a given sample in the frozen archive while maintaining individual sample integrity with sample tube confinement and quality management.</description><identifier>ISSN: 2213-0802</identifier><identifier>EISSN: 2213-0802</identifier><identifier>DOI: 10.1186/2213-0802-1-14</identifier><identifier>PMID: 27234395</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Biomedical and Life Sciences ; Biomedicine</subject><ispartof>Translational respiratory medicine, 2013-08, Vol.1 (1), p.14-14, Article 14</ispartof><rights>Malm et al.; licensee Springer. 2013. This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</rights><rights>The Author(s) 2013</rights><rights>Malm et al.; licensee Springer. 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3034-284c79a102a5da40a956364922b873be50deb6384c3b25ae1036549cce4381503</citedby><cites>FETCH-LOGICAL-c3034-284c79a102a5da40a956364922b873be50deb6384c3b25ae1036549cce4381503</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6733428/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6733428/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,882,27905,27906,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27234395$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Malm, Johan</creatorcontrib><creatorcontrib>Fehniger, Thomas E</creatorcontrib><creatorcontrib>Danmyr, Pia</creatorcontrib><creatorcontrib>Végvári, Ákos</creatorcontrib><creatorcontrib>Welinder, Charlotte</creatorcontrib><creatorcontrib>Lindberg, Henrik</creatorcontrib><creatorcontrib>Upton, Paul</creatorcontrib><creatorcontrib>Carter, Stephanie</creatorcontrib><creatorcontrib>Appelqvist, Roger</creatorcontrib><creatorcontrib>Sjödin, Karin</creatorcontrib><creatorcontrib>Wieslander, Elisabet</creatorcontrib><creatorcontrib>Dahlbäck, Magnus</creatorcontrib><creatorcontrib>Rezeli, Melinda</creatorcontrib><creatorcontrib>Erlinge, David</creatorcontrib><creatorcontrib>Marko-Varga, György</creatorcontrib><title>Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage</title><title>Translational respiratory medicine</title><addtitle>Transl Respir Med</addtitle><addtitle>Transl Respir Med</addtitle><description>Background Biobank samples stored in biobanks give researchers and respiratory healthcare institutions access to datasets of analytes valuable for both diagnostic and research practices. The usefulness of these samples in clinical decision-making is highly dependent on their quality and integrity. New procedures that better preserve sample integrity and reduce degradation are being developed to meet the needs of both present and future biobanking. Hereby we present an automatic sample workflow scheme that is designed to handle high numbers of blood samples. Methods Blood fractions are aliquoted, heat sealed using novel technology, and stored in 384 tube high-density sample arrays. Results The newly developed 384 biobank rack system is especially suited for preserving identical small aliquots. We provide data on robotic processing of clinical samples at −80°C, following initial processing, analysis and shipping between laboratories throughout Europe. Subsequent to unpacking, re-sorting, and storage at these sites, the samples have been returned for analysis. Biomarker analysis of 13 common tests in the clinical chemistry unit of the hospital provides evidence of qualitative and stable logistics using the 384-sample tube system. 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subjects Biomedical and Life Sciences
Biomedicine
title Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage
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