Histone demethylase PHF2 activates CREB and promotes memory consolidation

Long‐term memory formation is attributed to experience‐dependent gene expression. Dynamic changes in histone methylation are essential for the epigenetic regulation of memory consolidation‐related genes. Here, we demonstrate that the plant homeodomain finger protein 2 (PHF2) histone demethylase is u...

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Veröffentlicht in:EMBO reports 2019-09, Vol.20 (9), p.e45907-n/a
Hauptverfasser: Kim, Hye‐Jin, Hur, Sung Won, Park, Jun Bum, Seo, Jieun, Shin, Jae Jin, Kim, Seon‐Young, Kim, Myoung‐Hwan, Han, Do Hyun, Park, Jong‐Wan, Park, Joo Min, Kim, Sang Jeong, Chun, Yang‐Sook
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container_issue 9
container_start_page e45907
container_title EMBO reports
container_volume 20
creator Kim, Hye‐Jin
Hur, Sung Won
Park, Jun Bum
Seo, Jieun
Shin, Jae Jin
Kim, Seon‐Young
Kim, Myoung‐Hwan
Han, Do Hyun
Park, Jong‐Wan
Park, Joo Min
Kim, Sang Jeong
Chun, Yang‐Sook
description Long‐term memory formation is attributed to experience‐dependent gene expression. Dynamic changes in histone methylation are essential for the epigenetic regulation of memory consolidation‐related genes. Here, we demonstrate that the plant homeodomain finger protein 2 (PHF2) histone demethylase is upregulated in the mouse hippocampus during the experience phase and plays an essential role in memory formation. PHF2 promotes the expression of memory‐related genes by epigenetically reinforcing the TrkB–CREB signaling pathway. In behavioral tests, memory formation is enhanced by transgenic overexpression of PHF2 in mice, but is impaired by silencing PHF2 in the hippocampus. Electrophysiological studies reveal that PHF2 elevates field excitatory postsynaptic potential (fEPSP) and NMDA receptor‐mediated evoked excitatory postsynaptic current (EPSC) in CA1 pyramidal neurons, suggesting that PHF2 promotes long‐term potentiation. This study provides insight into the epigenetic regulation of learning and memory formation, which advances our knowledge to improve memory in patients with degenerative brain diseases. Synopsis Long‐term memory formation is established by experience‐dependent gene expression patterns. PHF2‐mediated epigenetic regulation of CREB serves as a molecular switch to link CREB‐dependent gene expression with activity‐dependent synaptic plasticity and memory. The PHF2 histone demethylase is upregulated after training and facilitates memory formation. PHF2 promotes long‐term potentiation in CA1 pyramidal neurons. PHF2 promotes the expression of memory‐related genes by epigenetically activating TrkB–CREB signaling. Graphical Abstract Long‐term memory formation is established by experience‐dependent gene expression patterns. PHF2‐mediated epigenetic regulation of CREB serves as a molecular switch to link CREB‐dependent gene expression with activity‐dependent synaptic plasticity and memory.
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Dynamic changes in histone methylation are essential for the epigenetic regulation of memory consolidation‐related genes. Here, we demonstrate that the plant homeodomain finger protein 2 (PHF2) histone demethylase is upregulated in the mouse hippocampus during the experience phase and plays an essential role in memory formation. PHF2 promotes the expression of memory‐related genes by epigenetically reinforcing the TrkB–CREB signaling pathway. In behavioral tests, memory formation is enhanced by transgenic overexpression of PHF2 in mice, but is impaired by silencing PHF2 in the hippocampus. Electrophysiological studies reveal that PHF2 elevates field excitatory postsynaptic potential (fEPSP) and NMDA receptor‐mediated evoked excitatory postsynaptic current (EPSC) in CA1 pyramidal neurons, suggesting that PHF2 promotes long‐term potentiation. This study provides insight into the epigenetic regulation of learning and memory formation, which advances our knowledge to improve memory in patients with degenerative brain diseases. Synopsis Long‐term memory formation is established by experience‐dependent gene expression patterns. PHF2‐mediated epigenetic regulation of CREB serves as a molecular switch to link CREB‐dependent gene expression with activity‐dependent synaptic plasticity and memory. The PHF2 histone demethylase is upregulated after training and facilitates memory formation. PHF2 promotes long‐term potentiation in CA1 pyramidal neurons. PHF2 promotes the expression of memory‐related genes by epigenetically activating TrkB–CREB signaling. Graphical Abstract Long‐term memory formation is established by experience‐dependent gene expression patterns. PHF2‐mediated epigenetic regulation of CREB serves as a molecular switch to link CREB‐dependent gene expression with activity‐dependent synaptic plasticity and memory.</description><identifier>ISSN: 1469-221X</identifier><identifier>ISSN: 1469-3178</identifier><identifier>EISSN: 1469-3178</identifier><identifier>DOI: 10.15252/embr.201845907</identifier><identifier>PMID: 31359606</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>Animal memory ; Animals ; Behavioral plasticity ; Computational Biology ; Consolidation ; CREB ; Cyclic AMP response element-binding protein ; DNA methylation ; EMBO09 ; EMBO27 ; EMBO37 ; Epigenesis, Genetic - genetics ; Epigenetics ; Excitatory postsynaptic potentials ; Gene expression ; Genes ; Glutamic acid receptors (ionotropic) ; Hippocampus ; Hippocampus - metabolism ; Histone Demethylases - genetics ; Histone Demethylases - metabolism ; Histones ; Homeobox ; Homeodomain Proteins - genetics ; Homeodomain Proteins - metabolism ; learning and memory ; lysine methylation ; Male ; Mass Spectrometry ; Maze Learning ; Memory Consolidation - physiology ; Mice ; Mice, Inbred C57BL ; Mice, Transgenic ; Molecular machines ; N-Methyl-D-aspartic acid receptors ; Neurons ; PHF2 ; Potentiation ; Pyramidal cells ; Signal transduction ; Signaling ; Synaptic plasticity ; TrkB receptors</subject><ispartof>EMBO reports, 2019-09, Vol.20 (9), p.e45907-n/a</ispartof><rights>The Author(s) 2019</rights><rights>2019 The Authors</rights><rights>2019 The Authors.</rights><rights>2019 EMBO</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5137-5122d3ad0da54628038d63d3a32836a93e40ed27a808b2f3b2f0c86c9c7b05673</citedby><cites>FETCH-LOGICAL-c5137-5122d3ad0da54628038d63d3a32836a93e40ed27a808b2f3b2f0c86c9c7b05673</cites><orcidid>0000-0001-8931-3713 ; 0000-0002-4283-2759 ; 0000-0002-3305-8597 ; 0000-0002-1261-9498 ; 0000-0003-3644-2516</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6726911/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6726911/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,1411,1427,27901,27902,41096,42165,45550,45551,46384,46808,51551,53766,53768</link.rule.ids><linktorsrc>$$Uhttps://doi.org/10.15252/embr.201845907$$EView_record_in_Springer_Nature$$FView_record_in_$$GSpringer_Nature</linktorsrc><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31359606$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Hye‐Jin</creatorcontrib><creatorcontrib>Hur, Sung Won</creatorcontrib><creatorcontrib>Park, Jun Bum</creatorcontrib><creatorcontrib>Seo, Jieun</creatorcontrib><creatorcontrib>Shin, Jae Jin</creatorcontrib><creatorcontrib>Kim, Seon‐Young</creatorcontrib><creatorcontrib>Kim, Myoung‐Hwan</creatorcontrib><creatorcontrib>Han, Do Hyun</creatorcontrib><creatorcontrib>Park, Jong‐Wan</creatorcontrib><creatorcontrib>Park, Joo Min</creatorcontrib><creatorcontrib>Kim, Sang Jeong</creatorcontrib><creatorcontrib>Chun, Yang‐Sook</creatorcontrib><title>Histone demethylase PHF2 activates CREB and promotes memory consolidation</title><title>EMBO reports</title><addtitle>EMBO Rep</addtitle><addtitle>EMBO Rep</addtitle><description>Long‐term memory formation is attributed to experience‐dependent gene expression. Dynamic changes in histone methylation are essential for the epigenetic regulation of memory consolidation‐related genes. Here, we demonstrate that the plant homeodomain finger protein 2 (PHF2) histone demethylase is upregulated in the mouse hippocampus during the experience phase and plays an essential role in memory formation. PHF2 promotes the expression of memory‐related genes by epigenetically reinforcing the TrkB–CREB signaling pathway. In behavioral tests, memory formation is enhanced by transgenic overexpression of PHF2 in mice, but is impaired by silencing PHF2 in the hippocampus. Electrophysiological studies reveal that PHF2 elevates field excitatory postsynaptic potential (fEPSP) and NMDA receptor‐mediated evoked excitatory postsynaptic current (EPSC) in CA1 pyramidal neurons, suggesting that PHF2 promotes long‐term potentiation. This study provides insight into the epigenetic regulation of learning and memory formation, which advances our knowledge to improve memory in patients with degenerative brain diseases. Synopsis Long‐term memory formation is established by experience‐dependent gene expression patterns. PHF2‐mediated epigenetic regulation of CREB serves as a molecular switch to link CREB‐dependent gene expression with activity‐dependent synaptic plasticity and memory. The PHF2 histone demethylase is upregulated after training and facilitates memory formation. PHF2 promotes long‐term potentiation in CA1 pyramidal neurons. PHF2 promotes the expression of memory‐related genes by epigenetically activating TrkB–CREB signaling. Graphical Abstract Long‐term memory formation is established by experience‐dependent gene expression patterns. PHF2‐mediated epigenetic regulation of CREB serves as a molecular switch to link CREB‐dependent gene expression with activity‐dependent synaptic plasticity and memory.</description><subject>Animal memory</subject><subject>Animals</subject><subject>Behavioral plasticity</subject><subject>Computational Biology</subject><subject>Consolidation</subject><subject>CREB</subject><subject>Cyclic AMP response element-binding protein</subject><subject>DNA methylation</subject><subject>EMBO09</subject><subject>EMBO27</subject><subject>EMBO37</subject><subject>Epigenesis, Genetic - genetics</subject><subject>Epigenetics</subject><subject>Excitatory postsynaptic potentials</subject><subject>Gene expression</subject><subject>Genes</subject><subject>Glutamic acid receptors (ionotropic)</subject><subject>Hippocampus</subject><subject>Hippocampus - metabolism</subject><subject>Histone Demethylases - genetics</subject><subject>Histone Demethylases - metabolism</subject><subject>Histones</subject><subject>Homeobox</subject><subject>Homeodomain Proteins - genetics</subject><subject>Homeodomain Proteins - metabolism</subject><subject>learning and memory</subject><subject>lysine methylation</subject><subject>Male</subject><subject>Mass Spectrometry</subject><subject>Maze Learning</subject><subject>Memory Consolidation - physiology</subject><subject>Mice</subject><subject>Mice, Inbred C57BL</subject><subject>Mice, Transgenic</subject><subject>Molecular machines</subject><subject>N-Methyl-D-aspartic acid receptors</subject><subject>Neurons</subject><subject>PHF2</subject><subject>Potentiation</subject><subject>Pyramidal cells</subject><subject>Signal transduction</subject><subject>Signaling</subject><subject>Synaptic plasticity</subject><subject>TrkB receptors</subject><issn>1469-221X</issn><issn>1469-3178</issn><issn>1469-3178</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1LXDEUxUNRqtWuu5MHbroZzcfLx-ui0BnGjmBRRMFdyCR3NPJeMiZvLPPfN3amoxbERUi4-Z3DuRyEvhB8RDjl9Bi6aTqimKiaN1h-QLukFs2AEam21m9Kyc0O-pTzPcaYN1J9RDuMMN4ILHbR6cTnPgaoHHTQ3y1bk6G6mJzQytjeP5oecjW6HA8rE1w1T7GLT5MOupiWlY0hx9Y70_sY9tH2zLQZPq_vPXR9Mr4aTQZn5z9PRz_OBpYTJgecUOqYcdgZXguqMFNOsDJhVDFhGgY1BkelUVhN6YyVg60StrFyirmQbA99X_nOF9MOnIXQJ9PqefKdSUsdjdevf4K_07fxUQtJRUNIMfi6NkjxYQG5153PFtrWBIiLrCkVEhNBGlrQw__Q-7hIoaxXKFUzUfOaFep4RdkUc04w24QhWP-tST_VpDc1FcXByx02_L9eCvBtBfz2LSzf89PjX8PLl-54Jc5FF24hPad-K9Af7QGunQ</recordid><startdate>201909</startdate><enddate>201909</enddate><creator>Kim, Hye‐Jin</creator><creator>Hur, Sung Won</creator><creator>Park, Jun Bum</creator><creator>Seo, Jieun</creator><creator>Shin, Jae Jin</creator><creator>Kim, Seon‐Young</creator><creator>Kim, Myoung‐Hwan</creator><creator>Han, Do Hyun</creator><creator>Park, Jong‐Wan</creator><creator>Park, Joo Min</creator><creator>Kim, Sang Jeong</creator><creator>Chun, Yang‐Sook</creator><general>Nature Publishing Group UK</general><general>Springer Nature B.V</general><general>John Wiley and Sons Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T5</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-8931-3713</orcidid><orcidid>https://orcid.org/0000-0002-4283-2759</orcidid><orcidid>https://orcid.org/0000-0002-3305-8597</orcidid><orcidid>https://orcid.org/0000-0002-1261-9498</orcidid><orcidid>https://orcid.org/0000-0003-3644-2516</orcidid></search><sort><creationdate>201909</creationdate><title>Histone demethylase PHF2 activates CREB and promotes memory consolidation</title><author>Kim, Hye‐Jin ; Hur, Sung Won ; Park, Jun Bum ; Seo, Jieun ; Shin, Jae Jin ; Kim, Seon‐Young ; Kim, Myoung‐Hwan ; Han, Do Hyun ; Park, Jong‐Wan ; Park, Joo Min ; Kim, Sang Jeong ; Chun, Yang‐Sook</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5137-5122d3ad0da54628038d63d3a32836a93e40ed27a808b2f3b2f0c86c9c7b05673</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Animal memory</topic><topic>Animals</topic><topic>Behavioral plasticity</topic><topic>Computational Biology</topic><topic>Consolidation</topic><topic>CREB</topic><topic>Cyclic AMP response element-binding protein</topic><topic>DNA methylation</topic><topic>EMBO09</topic><topic>EMBO27</topic><topic>EMBO37</topic><topic>Epigenesis, Genetic - genetics</topic><topic>Epigenetics</topic><topic>Excitatory postsynaptic potentials</topic><topic>Gene expression</topic><topic>Genes</topic><topic>Glutamic acid receptors (ionotropic)</topic><topic>Hippocampus</topic><topic>Hippocampus - metabolism</topic><topic>Histone Demethylases - genetics</topic><topic>Histone Demethylases - metabolism</topic><topic>Histones</topic><topic>Homeobox</topic><topic>Homeodomain Proteins - genetics</topic><topic>Homeodomain Proteins - metabolism</topic><topic>learning and memory</topic><topic>lysine methylation</topic><topic>Male</topic><topic>Mass Spectrometry</topic><topic>Maze Learning</topic><topic>Memory Consolidation - physiology</topic><topic>Mice</topic><topic>Mice, Inbred C57BL</topic><topic>Mice, Transgenic</topic><topic>Molecular machines</topic><topic>N-Methyl-D-aspartic acid receptors</topic><topic>Neurons</topic><topic>PHF2</topic><topic>Potentiation</topic><topic>Pyramidal cells</topic><topic>Signal transduction</topic><topic>Signaling</topic><topic>Synaptic plasticity</topic><topic>TrkB receptors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Hye‐Jin</creatorcontrib><creatorcontrib>Hur, Sung Won</creatorcontrib><creatorcontrib>Park, Jun Bum</creatorcontrib><creatorcontrib>Seo, Jieun</creatorcontrib><creatorcontrib>Shin, Jae Jin</creatorcontrib><creatorcontrib>Kim, Seon‐Young</creatorcontrib><creatorcontrib>Kim, Myoung‐Hwan</creatorcontrib><creatorcontrib>Han, Do Hyun</creatorcontrib><creatorcontrib>Park, Jong‐Wan</creatorcontrib><creatorcontrib>Park, Joo Min</creatorcontrib><creatorcontrib>Kim, Sang Jeong</creatorcontrib><creatorcontrib>Chun, Yang‐Sook</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Immunology Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health &amp; 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Dynamic changes in histone methylation are essential for the epigenetic regulation of memory consolidation‐related genes. Here, we demonstrate that the plant homeodomain finger protein 2 (PHF2) histone demethylase is upregulated in the mouse hippocampus during the experience phase and plays an essential role in memory formation. PHF2 promotes the expression of memory‐related genes by epigenetically reinforcing the TrkB–CREB signaling pathway. In behavioral tests, memory formation is enhanced by transgenic overexpression of PHF2 in mice, but is impaired by silencing PHF2 in the hippocampus. Electrophysiological studies reveal that PHF2 elevates field excitatory postsynaptic potential (fEPSP) and NMDA receptor‐mediated evoked excitatory postsynaptic current (EPSC) in CA1 pyramidal neurons, suggesting that PHF2 promotes long‐term potentiation. This study provides insight into the epigenetic regulation of learning and memory formation, which advances our knowledge to improve memory in patients with degenerative brain diseases. Synopsis Long‐term memory formation is established by experience‐dependent gene expression patterns. PHF2‐mediated epigenetic regulation of CREB serves as a molecular switch to link CREB‐dependent gene expression with activity‐dependent synaptic plasticity and memory. The PHF2 histone demethylase is upregulated after training and facilitates memory formation. PHF2 promotes long‐term potentiation in CA1 pyramidal neurons. PHF2 promotes the expression of memory‐related genes by epigenetically activating TrkB–CREB signaling. Graphical Abstract Long‐term memory formation is established by experience‐dependent gene expression patterns. PHF2‐mediated epigenetic regulation of CREB serves as a molecular switch to link CREB‐dependent gene expression with activity‐dependent synaptic plasticity and memory.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>31359606</pmid><doi>10.15252/embr.201845907</doi><tpages>19</tpages><orcidid>https://orcid.org/0000-0001-8931-3713</orcidid><orcidid>https://orcid.org/0000-0002-4283-2759</orcidid><orcidid>https://orcid.org/0000-0002-3305-8597</orcidid><orcidid>https://orcid.org/0000-0002-1261-9498</orcidid><orcidid>https://orcid.org/0000-0003-3644-2516</orcidid><oa>free_for_read</oa></addata></record>
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subjects Animal memory
Animals
Behavioral plasticity
Computational Biology
Consolidation
CREB
Cyclic AMP response element-binding protein
DNA methylation
EMBO09
EMBO27
EMBO37
Epigenesis, Genetic - genetics
Epigenetics
Excitatory postsynaptic potentials
Gene expression
Genes
Glutamic acid receptors (ionotropic)
Hippocampus
Hippocampus - metabolism
Histone Demethylases - genetics
Histone Demethylases - metabolism
Histones
Homeobox
Homeodomain Proteins - genetics
Homeodomain Proteins - metabolism
learning and memory
lysine methylation
Male
Mass Spectrometry
Maze Learning
Memory Consolidation - physiology
Mice
Mice, Inbred C57BL
Mice, Transgenic
Molecular machines
N-Methyl-D-aspartic acid receptors
Neurons
PHF2
Potentiation
Pyramidal cells
Signal transduction
Signaling
Synaptic plasticity
TrkB receptors
title Histone demethylase PHF2 activates CREB and promotes memory consolidation
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