Transcriptomic analysis of human IL‐7 receptor alpha low and high effector memory CD8+ T cells reveals an age‐associated signature linked to influenza vaccine response in older adults

Here, we investigated the relationship of the age‐associated expansion of IL‐7 receptor alpha low (IL‐7Rαlow) effector memory (EM) CD8+ T cells with the global transcriptomic profile of peripheral blood cells in humans. We found 231 aging signature genes of IL‐7Rαlow EM CD8+ T cells that corresponde...

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Veröffentlicht in:Aging cell 2019-08, Vol.18 (4), p.e12960-n/a
Hauptverfasser: Park, Hong‐Jai, Shin, Min Sun, Kim, Minhyung, Bilsborrow, Joshua B., Mohanty, Subhasis, Montgomery, Ruth R., Shaw, Albert C., You, Sungyong, Kang, Insoo
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container_issue 4
container_start_page e12960
container_title Aging cell
container_volume 18
creator Park, Hong‐Jai
Shin, Min Sun
Kim, Minhyung
Bilsborrow, Joshua B.
Mohanty, Subhasis
Montgomery, Ruth R.
Shaw, Albert C.
You, Sungyong
Kang, Insoo
description Here, we investigated the relationship of the age‐associated expansion of IL‐7 receptor alpha low (IL‐7Rαlow) effector memory (EM) CD8+ T cells with the global transcriptomic profile of peripheral blood cells in humans. We found 231 aging signature genes of IL‐7Rαlow EM CD8+ T cells that corresponded to 15% of the age‐associated genes (231/1,497) reported by a meta‐analysis study on human peripheral whole blood from approximately 15,000 individuals, having high correlation with chronological age. These aging signature genes were the target genes of several transcription factors including MYC, SATB1, and BATF, which also belonged to the 231 genes, supporting the upstream regulatory role of these transcription factors in altering the gene expression profile of peripheral blood cells with aging. We validated the differential expression of these transcription factors between IL‐7Rαlow and high EM CD8+ T cells as well as in peripheral blood mononuclear cells (PBMCs) of young and older adults. Finally, we found a significant association with influenza vaccine responses in older adults, suggesting the possible biological significance of the aging signature genes of IL‐7Rαlow EM CD8+ T cells. The results of our study support the relationship of the expansion of IL‐7Rαlow EM CD8+ T cells with the age‐associated changes in the gene expression profile of peripheral blood cells and its possible biological implications. Human effector memory (EM) CD8+ T cells expressing low levels of IL‐7 receptor alpha chain (IL‐7Rα), which expand with aging, have a unique set of genes (e.g. GZMH, FGFBP2, CX3CR1) that correlate with chronological age. These genes referred to as the aging signature genes of IL‐7Rα EM CD8+ T cells are targeted largely by the transcription factors MYC, SATB1 and BATF, and associated with influenza vaccine responses in older adults.
doi_str_mv 10.1111/acel.12960
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We found 231 aging signature genes of IL‐7Rαlow EM CD8+ T cells that corresponded to 15% of the age‐associated genes (231/1,497) reported by a meta‐analysis study on human peripheral whole blood from approximately 15,000 individuals, having high correlation with chronological age. These aging signature genes were the target genes of several transcription factors including MYC, SATB1, and BATF, which also belonged to the 231 genes, supporting the upstream regulatory role of these transcription factors in altering the gene expression profile of peripheral blood cells with aging. We validated the differential expression of these transcription factors between IL‐7Rαlow and high EM CD8+ T cells as well as in peripheral blood mononuclear cells (PBMCs) of young and older adults. Finally, we found a significant association with influenza vaccine responses in older adults, suggesting the possible biological significance of the aging signature genes of IL‐7Rαlow EM CD8+ T cells. The results of our study support the relationship of the expansion of IL‐7Rαlow EM CD8+ T cells with the age‐associated changes in the gene expression profile of peripheral blood cells and its possible biological implications. Human effector memory (EM) CD8+ T cells expressing low levels of IL‐7 receptor alpha chain (IL‐7Rα), which expand with aging, have a unique set of genes (e.g. GZMH, FGFBP2, CX3CR1) that correlate with chronological age. These genes referred to as the aging signature genes of IL‐7Rα EM CD8+ T cells are targeted largely by the transcription factors MYC, SATB1 and BATF, and associated with influenza vaccine responses in older adults.</description><identifier>ISSN: 1474-9718</identifier><identifier>EISSN: 1474-9726</identifier><identifier>DOI: 10.1111/acel.12960</identifier><identifier>PMID: 31044512</identifier><language>eng</language><publisher>England: John Wiley &amp; Sons, Inc</publisher><subject>Adult ; Age ; Aged ; Aging ; Aging - immunology ; Analysis ; Blood ; CD8 antigen ; CD8-Positive T-Lymphocytes - immunology ; Cohort Studies ; Effector cells ; Female ; Gene expression ; Gene Expression Profiling - methods ; Gene Regulatory Networks - genetics ; Genes ; Healthy Volunteers ; human ; Humans ; IL‐7 receptor alpha ; Immunologic Memory - immunology ; Immunological memory ; Influenza ; Influenza vaccines ; Influenza Vaccines - immunology ; Leukocytes (mononuclear) ; Lymphocytes ; Lymphocytes T ; Male ; Memory (Computers) ; memory CD8+ T cells ; Memory cells ; Middle Aged ; Myc protein ; Older people ; Original ; Peripheral blood mononuclear cells ; Receptors, Interleukin-7 - genetics ; T cells ; Transcription factors ; Transcription Factors - genetics ; Transcriptome ; vaccine response ; Vaccines ; Young Adult</subject><ispartof>Aging cell, 2019-08, Vol.18 (4), p.e12960-n/a</ispartof><rights>2019 The Authors. published by the Anatomical Society and John Wiley &amp; Sons Ltd.</rights><rights>2019 The Authors. Aging Cell published by the Anatomical Society and John Wiley &amp; Sons Ltd.</rights><rights>COPYRIGHT 2019 John Wiley &amp; Sons, Inc.</rights><rights>2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3600-1c3519e49fd4c9a6b46c7ab3d9b0f405924a56dad75bc03295241cada93bec613</citedby><cites>FETCH-LOGICAL-c3600-1c3519e49fd4c9a6b46c7ab3d9b0f405924a56dad75bc03295241cada93bec613</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612637/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612637/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,1417,11562,27924,27925,45574,45575,46052,46476,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31044512$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Park, Hong‐Jai</creatorcontrib><creatorcontrib>Shin, Min Sun</creatorcontrib><creatorcontrib>Kim, Minhyung</creatorcontrib><creatorcontrib>Bilsborrow, Joshua B.</creatorcontrib><creatorcontrib>Mohanty, Subhasis</creatorcontrib><creatorcontrib>Montgomery, Ruth R.</creatorcontrib><creatorcontrib>Shaw, Albert C.</creatorcontrib><creatorcontrib>You, Sungyong</creatorcontrib><creatorcontrib>Kang, Insoo</creatorcontrib><title>Transcriptomic analysis of human IL‐7 receptor alpha low and high effector memory CD8+ T cells reveals an age‐associated signature linked to influenza vaccine response in older adults</title><title>Aging cell</title><addtitle>Aging Cell</addtitle><description>Here, we investigated the relationship of the age‐associated expansion of IL‐7 receptor alpha low (IL‐7Rαlow) effector memory (EM) CD8+ T cells with the global transcriptomic profile of peripheral blood cells in humans. We found 231 aging signature genes of IL‐7Rαlow EM CD8+ T cells that corresponded to 15% of the age‐associated genes (231/1,497) reported by a meta‐analysis study on human peripheral whole blood from approximately 15,000 individuals, having high correlation with chronological age. These aging signature genes were the target genes of several transcription factors including MYC, SATB1, and BATF, which also belonged to the 231 genes, supporting the upstream regulatory role of these transcription factors in altering the gene expression profile of peripheral blood cells with aging. We validated the differential expression of these transcription factors between IL‐7Rαlow and high EM CD8+ T cells as well as in peripheral blood mononuclear cells (PBMCs) of young and older adults. Finally, we found a significant association with influenza vaccine responses in older adults, suggesting the possible biological significance of the aging signature genes of IL‐7Rαlow EM CD8+ T cells. The results of our study support the relationship of the expansion of IL‐7Rαlow EM CD8+ T cells with the age‐associated changes in the gene expression profile of peripheral blood cells and its possible biological implications. Human effector memory (EM) CD8+ T cells expressing low levels of IL‐7 receptor alpha chain (IL‐7Rα), which expand with aging, have a unique set of genes (e.g. GZMH, FGFBP2, CX3CR1) that correlate with chronological age. These genes referred to as the aging signature genes of IL‐7Rα EM CD8+ T cells are targeted largely by the transcription factors MYC, SATB1 and BATF, and associated with influenza vaccine responses in older adults.</description><subject>Adult</subject><subject>Age</subject><subject>Aged</subject><subject>Aging</subject><subject>Aging - immunology</subject><subject>Analysis</subject><subject>Blood</subject><subject>CD8 antigen</subject><subject>CD8-Positive T-Lymphocytes - immunology</subject><subject>Cohort Studies</subject><subject>Effector cells</subject><subject>Female</subject><subject>Gene expression</subject><subject>Gene Expression Profiling - methods</subject><subject>Gene Regulatory Networks - genetics</subject><subject>Genes</subject><subject>Healthy Volunteers</subject><subject>human</subject><subject>Humans</subject><subject>IL‐7 receptor alpha</subject><subject>Immunologic Memory - immunology</subject><subject>Immunological memory</subject><subject>Influenza</subject><subject>Influenza vaccines</subject><subject>Influenza Vaccines - immunology</subject><subject>Leukocytes (mononuclear)</subject><subject>Lymphocytes</subject><subject>Lymphocytes T</subject><subject>Male</subject><subject>Memory (Computers)</subject><subject>memory CD8+ T cells</subject><subject>Memory cells</subject><subject>Middle Aged</subject><subject>Myc protein</subject><subject>Older people</subject><subject>Original</subject><subject>Peripheral blood mononuclear cells</subject><subject>Receptors, Interleukin-7 - genetics</subject><subject>T cells</subject><subject>Transcription factors</subject><subject>Transcription Factors - genetics</subject><subject>Transcriptome</subject><subject>vaccine response</subject><subject>Vaccines</subject><subject>Young Adult</subject><issn>1474-9718</issn><issn>1474-9726</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9ks2O0zAQgCMEYpeFCw-ALHFBoBY7_74gVWWBlSpxWc7WxJ60XhK72ElX5cQj8D68DU_ChC6FRQjn4MjzzWd7PEnyWPC5oPESNHZzkcqS30lORV7lM1ml5d3jv6hPkgcxXnEuKsmz-8lJJnieFyI9Tb5dBnBRB7sdfG81AwfdPtrIfMs2Yw-OXay-f_lasYAaiQkMuu0GWOeviTVsY9cbhm2Leor12PuwZ8vX9Qt2yehYXaTEHQLNpII1kgti9NrCgIZFu3YwjAFZZ91HWhg8s67tRnSfge1Aa-uQDHHrXUQKMd8ZpDOYsRviw-ReS2Z8dDOfJR_enF8u381W799eLBermc5KzmdCZ4WQmMvW5FpC2eSlrqDJjGx4m_NCpjkUpQFTFY3mWSqLNBcaDMisQV2K7Cx5dfBux6ZHo9ENATq1DbaHsFcerLodcXaj1n6nylKkZVaR4NmNIPhPI8ZB9TZO1QGHfowqTUUtZV2IktCnf6FXfgz0KBNVpLKWVZH_ptbQoaKKedpXT1K1qHhVF7KSGVHzf1D0GaSn9g5bS-u3Ep4fEnTwMQZsj3cUXE2tpqZWUz9bjeAnf1bliP7qLQLEAbimbfb_UanF8nx1kP4AGQHi3A</recordid><startdate>201908</startdate><enddate>201908</enddate><creator>Park, Hong‐Jai</creator><creator>Shin, Min Sun</creator><creator>Kim, Minhyung</creator><creator>Bilsborrow, Joshua B.</creator><creator>Mohanty, Subhasis</creator><creator>Montgomery, Ruth R.</creator><creator>Shaw, Albert C.</creator><creator>You, Sungyong</creator><creator>Kang, Insoo</creator><general>John Wiley &amp; 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We found 231 aging signature genes of IL‐7Rαlow EM CD8+ T cells that corresponded to 15% of the age‐associated genes (231/1,497) reported by a meta‐analysis study on human peripheral whole blood from approximately 15,000 individuals, having high correlation with chronological age. These aging signature genes were the target genes of several transcription factors including MYC, SATB1, and BATF, which also belonged to the 231 genes, supporting the upstream regulatory role of these transcription factors in altering the gene expression profile of peripheral blood cells with aging. We validated the differential expression of these transcription factors between IL‐7Rαlow and high EM CD8+ T cells as well as in peripheral blood mononuclear cells (PBMCs) of young and older adults. Finally, we found a significant association with influenza vaccine responses in older adults, suggesting the possible biological significance of the aging signature genes of IL‐7Rαlow EM CD8+ T cells. The results of our study support the relationship of the expansion of IL‐7Rαlow EM CD8+ T cells with the age‐associated changes in the gene expression profile of peripheral blood cells and its possible biological implications. Human effector memory (EM) CD8+ T cells expressing low levels of IL‐7 receptor alpha chain (IL‐7Rα), which expand with aging, have a unique set of genes (e.g. GZMH, FGFBP2, CX3CR1) that correlate with chronological age. These genes referred to as the aging signature genes of IL‐7Rα EM CD8+ T cells are targeted largely by the transcription factors MYC, SATB1 and BATF, and associated with influenza vaccine responses in older adults.</abstract><cop>England</cop><pub>John Wiley &amp; Sons, Inc</pub><pmid>31044512</pmid><doi>10.1111/acel.12960</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record>
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subjects Adult
Age
Aged
Aging
Aging - immunology
Analysis
Blood
CD8 antigen
CD8-Positive T-Lymphocytes - immunology
Cohort Studies
Effector cells
Female
Gene expression
Gene Expression Profiling - methods
Gene Regulatory Networks - genetics
Genes
Healthy Volunteers
human
Humans
IL‐7 receptor alpha
Immunologic Memory - immunology
Immunological memory
Influenza
Influenza vaccines
Influenza Vaccines - immunology
Leukocytes (mononuclear)
Lymphocytes
Lymphocytes T
Male
Memory (Computers)
memory CD8+ T cells
Memory cells
Middle Aged
Myc protein
Older people
Original
Peripheral blood mononuclear cells
Receptors, Interleukin-7 - genetics
T cells
Transcription factors
Transcription Factors - genetics
Transcriptome
vaccine response
Vaccines
Young Adult
title Transcriptomic analysis of human IL‐7 receptor alpha low and high effector memory CD8+ T cells reveals an age‐associated signature linked to influenza vaccine response in older adults
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