Identification of the Raf kinase inhibitor TAK‐632 and its analogues as potent inhibitors of necroptosis by targeting RIPK1 and RIPK3

Background and Purpose Necroptosis is a form of programmed, caspase‐independent, cell death, mediated by receptor‐interacting protein kinases, RIPK1 and RIPK3, and the mixed lineage kinase domain‐like (MLKL). Necroptosis contributes to the pathophysiology of various inflammatory, infectious, and deg...

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Veröffentlicht in:British journal of pharmacology 2019-06, Vol.176 (12), p.2095-2108
Hauptverfasser: Chen, Xiaofei, Zhuang, Chunlin, Ren, Yibin, Zhang, Hao, Qin, Xia, Hu, Longmiao, Fu, Jing, Miao, Zhenyuan, Chai, Yifeng, Liu, Zheng‐gang, Zhang, Haibing, Cai, Zhenyu, Wang, Hong‐yang
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container_end_page 2108
container_issue 12
container_start_page 2095
container_title British journal of pharmacology
container_volume 176
creator Chen, Xiaofei
Zhuang, Chunlin
Ren, Yibin
Zhang, Hao
Qin, Xia
Hu, Longmiao
Fu, Jing
Miao, Zhenyuan
Chai, Yifeng
Liu, Zheng‐gang
Zhang, Haibing
Cai, Zhenyu
Wang, Hong‐yang
description Background and Purpose Necroptosis is a form of programmed, caspase‐independent, cell death, mediated by receptor‐interacting protein kinases, RIPK1 and RIPK3, and the mixed lineage kinase domain‐like (MLKL). Necroptosis contributes to the pathophysiology of various inflammatory, infectious, and degenerative diseases. Thus, identification of low MW inhibitors for necroptosis has broad therapeutic relevance. Here, we identified that the pan‐Raf inhibitor TAK‐632 was also an inhibitor of necroptosis. We have further generated a more selective, highly potent analogue of TAK‐632 by targeting RIPK1 and RIPK3. Experimental Approach Cell viability was measured by MTT, propidium staining, or CellTiter‐Glo luminescent assays. Effects of TAK‐632 on necroptosis signalling pathways were investigated by western blotting, immunoprecipitation, and in vitro kinase assays. Downstream targets of TAK‐632 were identified by a drug affinity responsive target stability assay and a pull‐down assay with biotinylated TAK‐632. A mouse model of TNF‐α‐induced systemic inflammatory response syndrome (SIRS) was further used to explore the role of TAK‐632 in protecting against necroptosis‐associated inflammation in vivo. Key Results TAK‐632 protected against necroptosis in human and mouse cells but did not protect cells from apoptosis. TAK‐632 directly bound with RIPK1 and RIPK3 to inhibit kinase activities of both enzymes. In vivo, TAK‐632 alleviated TNF‐induced SIRS. Furthermore, we performed a structure–activity relationship analysis of TAK‐632 analogues and generated SZM594, a highly potent inhibitor of RIPK1/3. Conclusions and Implications TAK‐632 is an inhibitor of necroptosis and represents a new lead compound in the development of highly potent inhibitors of RIPK1 and RIPK3.
doi_str_mv 10.1111/bph.14653
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Necroptosis contributes to the pathophysiology of various inflammatory, infectious, and degenerative diseases. Thus, identification of low MW inhibitors for necroptosis has broad therapeutic relevance. Here, we identified that the pan‐Raf inhibitor TAK‐632 was also an inhibitor of necroptosis. We have further generated a more selective, highly potent analogue of TAK‐632 by targeting RIPK1 and RIPK3. Experimental Approach Cell viability was measured by MTT, propidium staining, or CellTiter‐Glo luminescent assays. Effects of TAK‐632 on necroptosis signalling pathways were investigated by western blotting, immunoprecipitation, and in vitro kinase assays. Downstream targets of TAK‐632 were identified by a drug affinity responsive target stability assay and a pull‐down assay with biotinylated TAK‐632. A mouse model of TNF‐α‐induced systemic inflammatory response syndrome (SIRS) was further used to explore the role of TAK‐632 in protecting against necroptosis‐associated inflammation in vivo. Key Results TAK‐632 protected against necroptosis in human and mouse cells but did not protect cells from apoptosis. TAK‐632 directly bound with RIPK1 and RIPK3 to inhibit kinase activities of both enzymes. In vivo, TAK‐632 alleviated TNF‐induced SIRS. Furthermore, we performed a structure–activity relationship analysis of TAK‐632 analogues and generated SZM594, a highly potent inhibitor of RIPK1/3. Conclusions and Implications TAK‐632 is an inhibitor of necroptosis and represents a new lead compound in the development of highly potent inhibitors of RIPK1 and RIPK3.</description><identifier>ISSN: 0007-1188</identifier><identifier>EISSN: 1476-5381</identifier><identifier>DOI: 10.1111/bph.14653</identifier><identifier>PMID: 30825190</identifier><language>eng</language><publisher>England: Blackwell Publishing Ltd</publisher><subject>Animals ; Apoptosis ; Assaying ; Benzothiazoles - administration &amp; dosage ; Benzothiazoles - chemistry ; Benzothiazoles - pharmacology ; Caspase ; Cell death ; Cell Survival - drug effects ; Cell viability ; Cells, Cultured ; Degenerative diseases ; Dose-Response Relationship, Drug ; Drug Evaluation, Preclinical ; Enzyme inhibitors ; Female ; HEK293 Cells ; HT29 Cells ; Humans ; Immunoprecipitation ; Inflammatory response ; Inhibitors ; Kinases ; Lead compounds ; MAP kinase ; Mice ; Mice, Inbred C57BL ; Molecular Structure ; Necroptosis ; Necroptosis - drug effects ; Nitriles - administration &amp; dosage ; Nitriles - chemistry ; Nitriles - pharmacology ; Pathophysiology ; Protein Kinase Inhibitors - administration &amp; dosage ; Protein Kinase Inhibitors - chemistry ; Protein Kinase Inhibitors - pharmacology ; Raf protein ; Receptor-Interacting Protein Serine-Threonine Kinases - antagonists &amp; inhibitors ; Receptor-Interacting Protein Serine-Threonine Kinases - metabolism ; Research Paper ; Research Papers ; Signal transduction ; Structure-Activity Relationship ; Systemic inflammatory response syndrome ; Tumor necrosis factor ; Western blotting</subject><ispartof>British journal of pharmacology, 2019-06, Vol.176 (12), p.2095-2108</ispartof><rights>2019 The British Pharmacological Society</rights><rights>2019 The British Pharmacological Society.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4433-c0b49c535809215bddbdac5ebbacbe27b7314d87a5a1ffeba4ebe92f55fd89513</citedby><cites>FETCH-LOGICAL-c4433-c0b49c535809215bddbdac5ebbacbe27b7314d87a5a1ffeba4ebe92f55fd89513</cites><orcidid>0000-0002-6252-5879 ; 0000-0002-0569-5708</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6534794/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6534794/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,724,777,781,882,1412,1428,27905,27906,45555,45556,46390,46814,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30825190$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chen, Xiaofei</creatorcontrib><creatorcontrib>Zhuang, Chunlin</creatorcontrib><creatorcontrib>Ren, Yibin</creatorcontrib><creatorcontrib>Zhang, Hao</creatorcontrib><creatorcontrib>Qin, Xia</creatorcontrib><creatorcontrib>Hu, Longmiao</creatorcontrib><creatorcontrib>Fu, Jing</creatorcontrib><creatorcontrib>Miao, Zhenyuan</creatorcontrib><creatorcontrib>Chai, Yifeng</creatorcontrib><creatorcontrib>Liu, Zheng‐gang</creatorcontrib><creatorcontrib>Zhang, Haibing</creatorcontrib><creatorcontrib>Cai, Zhenyu</creatorcontrib><creatorcontrib>Wang, Hong‐yang</creatorcontrib><title>Identification of the Raf kinase inhibitor TAK‐632 and its analogues as potent inhibitors of necroptosis by targeting RIPK1 and RIPK3</title><title>British journal of pharmacology</title><addtitle>Br J Pharmacol</addtitle><description>Background and Purpose Necroptosis is a form of programmed, caspase‐independent, cell death, mediated by receptor‐interacting protein kinases, RIPK1 and RIPK3, and the mixed lineage kinase domain‐like (MLKL). Necroptosis contributes to the pathophysiology of various inflammatory, infectious, and degenerative diseases. Thus, identification of low MW inhibitors for necroptosis has broad therapeutic relevance. Here, we identified that the pan‐Raf inhibitor TAK‐632 was also an inhibitor of necroptosis. We have further generated a more selective, highly potent analogue of TAK‐632 by targeting RIPK1 and RIPK3. Experimental Approach Cell viability was measured by MTT, propidium staining, or CellTiter‐Glo luminescent assays. Effects of TAK‐632 on necroptosis signalling pathways were investigated by western blotting, immunoprecipitation, and in vitro kinase assays. Downstream targets of TAK‐632 were identified by a drug affinity responsive target stability assay and a pull‐down assay with biotinylated TAK‐632. A mouse model of TNF‐α‐induced systemic inflammatory response syndrome (SIRS) was further used to explore the role of TAK‐632 in protecting against necroptosis‐associated inflammation in vivo. Key Results TAK‐632 protected against necroptosis in human and mouse cells but did not protect cells from apoptosis. TAK‐632 directly bound with RIPK1 and RIPK3 to inhibit kinase activities of both enzymes. In vivo, TAK‐632 alleviated TNF‐induced SIRS. Furthermore, we performed a structure–activity relationship analysis of TAK‐632 analogues and generated SZM594, a highly potent inhibitor of RIPK1/3. Conclusions and Implications TAK‐632 is an inhibitor of necroptosis and represents a new lead compound in the development of highly potent inhibitors of RIPK1 and RIPK3.</description><subject>Animals</subject><subject>Apoptosis</subject><subject>Assaying</subject><subject>Benzothiazoles - administration &amp; dosage</subject><subject>Benzothiazoles - chemistry</subject><subject>Benzothiazoles - pharmacology</subject><subject>Caspase</subject><subject>Cell death</subject><subject>Cell Survival - drug effects</subject><subject>Cell viability</subject><subject>Cells, Cultured</subject><subject>Degenerative diseases</subject><subject>Dose-Response Relationship, Drug</subject><subject>Drug Evaluation, Preclinical</subject><subject>Enzyme inhibitors</subject><subject>Female</subject><subject>HEK293 Cells</subject><subject>HT29 Cells</subject><subject>Humans</subject><subject>Immunoprecipitation</subject><subject>Inflammatory response</subject><subject>Inhibitors</subject><subject>Kinases</subject><subject>Lead compounds</subject><subject>MAP kinase</subject><subject>Mice</subject><subject>Mice, Inbred C57BL</subject><subject>Molecular Structure</subject><subject>Necroptosis</subject><subject>Necroptosis - drug effects</subject><subject>Nitriles - administration &amp; dosage</subject><subject>Nitriles - chemistry</subject><subject>Nitriles - pharmacology</subject><subject>Pathophysiology</subject><subject>Protein Kinase Inhibitors - administration &amp; dosage</subject><subject>Protein Kinase Inhibitors - chemistry</subject><subject>Protein Kinase Inhibitors - pharmacology</subject><subject>Raf protein</subject><subject>Receptor-Interacting Protein Serine-Threonine Kinases - antagonists &amp; inhibitors</subject><subject>Receptor-Interacting Protein Serine-Threonine Kinases - metabolism</subject><subject>Research Paper</subject><subject>Research Papers</subject><subject>Signal transduction</subject><subject>Structure-Activity Relationship</subject><subject>Systemic inflammatory response syndrome</subject><subject>Tumor necrosis factor</subject><subject>Western blotting</subject><issn>0007-1188</issn><issn>1476-5381</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kc1OAyEQgInR2Fo9-AKGxJOHVVigu3sx0UZtYxONqWcCu9CidVmBanrz5tVn9EmkVqse5DKTzJeP-QFgF6NDHN-RbCaHmHYZWQNtTLNuwkiO10EbIZQlGOd5C2x5f4dQLGZsE7QIylOGC9QGr4NK1cFoU4pgbA2thmGi4I3Q8N7Uwito6omRJlgHRyeX7y9vXZJCUVfQBB-jmNrxTMXMw8aGqPrh_UJWq9LZJlhvPJRzGIQbq2DqMbwZXF_iT9EiI9tgQ4upVztfsQNuz89GvX4yvLoY9E6GSUkpIUmJJC1KRliOihQzWVWyEiVTUopSqjSTGcG0yjPBBNZaSUGVVEWqGdNVXjBMOuB46W1m8kFVZezYiSlvnHkQbs6tMPxvpTYTPrZPPG6XZgWNgv0vgbOPcfLA7-zMxT14nqZFNy1yQrJIHSypOL33TunVDxjxxc14vBn_vFlk9363tCK_jxSBoyXwbKZq_r-Jn173l8oPYDWjzQ</recordid><startdate>201906</startdate><enddate>201906</enddate><creator>Chen, Xiaofei</creator><creator>Zhuang, Chunlin</creator><creator>Ren, Yibin</creator><creator>Zhang, Hao</creator><creator>Qin, Xia</creator><creator>Hu, Longmiao</creator><creator>Fu, Jing</creator><creator>Miao, Zhenyuan</creator><creator>Chai, Yifeng</creator><creator>Liu, Zheng‐gang</creator><creator>Zhang, Haibing</creator><creator>Cai, Zhenyu</creator><creator>Wang, Hong‐yang</creator><general>Blackwell Publishing Ltd</general><general>John Wiley and Sons Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7TK</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-6252-5879</orcidid><orcidid>https://orcid.org/0000-0002-0569-5708</orcidid></search><sort><creationdate>201906</creationdate><title>Identification of the Raf kinase inhibitor TAK‐632 and its analogues as potent inhibitors of necroptosis by targeting RIPK1 and RIPK3</title><author>Chen, Xiaofei ; Zhuang, Chunlin ; Ren, Yibin ; Zhang, Hao ; Qin, Xia ; Hu, Longmiao ; Fu, Jing ; Miao, Zhenyuan ; Chai, Yifeng ; Liu, Zheng‐gang ; Zhang, Haibing ; Cai, Zhenyu ; Wang, Hong‐yang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4433-c0b49c535809215bddbdac5ebbacbe27b7314d87a5a1ffeba4ebe92f55fd89513</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Animals</topic><topic>Apoptosis</topic><topic>Assaying</topic><topic>Benzothiazoles - administration &amp; dosage</topic><topic>Benzothiazoles - chemistry</topic><topic>Benzothiazoles - pharmacology</topic><topic>Caspase</topic><topic>Cell death</topic><topic>Cell Survival - drug effects</topic><topic>Cell viability</topic><topic>Cells, Cultured</topic><topic>Degenerative diseases</topic><topic>Dose-Response Relationship, Drug</topic><topic>Drug Evaluation, Preclinical</topic><topic>Enzyme inhibitors</topic><topic>Female</topic><topic>HEK293 Cells</topic><topic>HT29 Cells</topic><topic>Humans</topic><topic>Immunoprecipitation</topic><topic>Inflammatory response</topic><topic>Inhibitors</topic><topic>Kinases</topic><topic>Lead compounds</topic><topic>MAP kinase</topic><topic>Mice</topic><topic>Mice, Inbred C57BL</topic><topic>Molecular Structure</topic><topic>Necroptosis</topic><topic>Necroptosis - drug effects</topic><topic>Nitriles - administration &amp; dosage</topic><topic>Nitriles - chemistry</topic><topic>Nitriles - pharmacology</topic><topic>Pathophysiology</topic><topic>Protein Kinase Inhibitors - administration &amp; dosage</topic><topic>Protein Kinase Inhibitors - chemistry</topic><topic>Protein Kinase Inhibitors - pharmacology</topic><topic>Raf protein</topic><topic>Receptor-Interacting Protein Serine-Threonine Kinases - antagonists &amp; inhibitors</topic><topic>Receptor-Interacting Protein Serine-Threonine Kinases - metabolism</topic><topic>Research Paper</topic><topic>Research Papers</topic><topic>Signal transduction</topic><topic>Structure-Activity Relationship</topic><topic>Systemic inflammatory response syndrome</topic><topic>Tumor necrosis factor</topic><topic>Western blotting</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chen, Xiaofei</creatorcontrib><creatorcontrib>Zhuang, Chunlin</creatorcontrib><creatorcontrib>Ren, Yibin</creatorcontrib><creatorcontrib>Zhang, Hao</creatorcontrib><creatorcontrib>Qin, Xia</creatorcontrib><creatorcontrib>Hu, Longmiao</creatorcontrib><creatorcontrib>Fu, Jing</creatorcontrib><creatorcontrib>Miao, Zhenyuan</creatorcontrib><creatorcontrib>Chai, Yifeng</creatorcontrib><creatorcontrib>Liu, Zheng‐gang</creatorcontrib><creatorcontrib>Zhang, Haibing</creatorcontrib><creatorcontrib>Cai, Zhenyu</creatorcontrib><creatorcontrib>Wang, Hong‐yang</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Nursing &amp; Allied Health Premium</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>British journal of pharmacology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chen, Xiaofei</au><au>Zhuang, Chunlin</au><au>Ren, Yibin</au><au>Zhang, Hao</au><au>Qin, Xia</au><au>Hu, Longmiao</au><au>Fu, Jing</au><au>Miao, Zhenyuan</au><au>Chai, Yifeng</au><au>Liu, Zheng‐gang</au><au>Zhang, Haibing</au><au>Cai, Zhenyu</au><au>Wang, Hong‐yang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of the Raf kinase inhibitor TAK‐632 and its analogues as potent inhibitors of necroptosis by targeting RIPK1 and RIPK3</atitle><jtitle>British journal of pharmacology</jtitle><addtitle>Br J Pharmacol</addtitle><date>2019-06</date><risdate>2019</risdate><volume>176</volume><issue>12</issue><spage>2095</spage><epage>2108</epage><pages>2095-2108</pages><issn>0007-1188</issn><eissn>1476-5381</eissn><abstract>Background and Purpose Necroptosis is a form of programmed, caspase‐independent, cell death, mediated by receptor‐interacting protein kinases, RIPK1 and RIPK3, and the mixed lineage kinase domain‐like (MLKL). Necroptosis contributes to the pathophysiology of various inflammatory, infectious, and degenerative diseases. Thus, identification of low MW inhibitors for necroptosis has broad therapeutic relevance. Here, we identified that the pan‐Raf inhibitor TAK‐632 was also an inhibitor of necroptosis. We have further generated a more selective, highly potent analogue of TAK‐632 by targeting RIPK1 and RIPK3. Experimental Approach Cell viability was measured by MTT, propidium staining, or CellTiter‐Glo luminescent assays. Effects of TAK‐632 on necroptosis signalling pathways were investigated by western blotting, immunoprecipitation, and in vitro kinase assays. Downstream targets of TAK‐632 were identified by a drug affinity responsive target stability assay and a pull‐down assay with biotinylated TAK‐632. A mouse model of TNF‐α‐induced systemic inflammatory response syndrome (SIRS) was further used to explore the role of TAK‐632 in protecting against necroptosis‐associated inflammation in vivo. Key Results TAK‐632 protected against necroptosis in human and mouse cells but did not protect cells from apoptosis. TAK‐632 directly bound with RIPK1 and RIPK3 to inhibit kinase activities of both enzymes. In vivo, TAK‐632 alleviated TNF‐induced SIRS. Furthermore, we performed a structure–activity relationship analysis of TAK‐632 analogues and generated SZM594, a highly potent inhibitor of RIPK1/3. Conclusions and Implications TAK‐632 is an inhibitor of necroptosis and represents a new lead compound in the development of highly potent inhibitors of RIPK1 and RIPK3.</abstract><cop>England</cop><pub>Blackwell Publishing Ltd</pub><pmid>30825190</pmid><doi>10.1111/bph.14653</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0002-6252-5879</orcidid><orcidid>https://orcid.org/0000-0002-0569-5708</orcidid><oa>free_for_read</oa></addata></record>
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subjects Animals
Apoptosis
Assaying
Benzothiazoles - administration & dosage
Benzothiazoles - chemistry
Benzothiazoles - pharmacology
Caspase
Cell death
Cell Survival - drug effects
Cell viability
Cells, Cultured
Degenerative diseases
Dose-Response Relationship, Drug
Drug Evaluation, Preclinical
Enzyme inhibitors
Female
HEK293 Cells
HT29 Cells
Humans
Immunoprecipitation
Inflammatory response
Inhibitors
Kinases
Lead compounds
MAP kinase
Mice
Mice, Inbred C57BL
Molecular Structure
Necroptosis
Necroptosis - drug effects
Nitriles - administration & dosage
Nitriles - chemistry
Nitriles - pharmacology
Pathophysiology
Protein Kinase Inhibitors - administration & dosage
Protein Kinase Inhibitors - chemistry
Protein Kinase Inhibitors - pharmacology
Raf protein
Receptor-Interacting Protein Serine-Threonine Kinases - antagonists & inhibitors
Receptor-Interacting Protein Serine-Threonine Kinases - metabolism
Research Paper
Research Papers
Signal transduction
Structure-Activity Relationship
Systemic inflammatory response syndrome
Tumor necrosis factor
Western blotting
title Identification of the Raf kinase inhibitor TAK‐632 and its analogues as potent inhibitors of necroptosis by targeting RIPK1 and RIPK3
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