Citrate synthase from Synechocystis is a distinct class of bacterial citrate synthase
Citrate synthase (CS, EC 2.3.3.1) catalyses the initial reaction of the tricarboxylic acid (TCA) cycle. Although CSs from heterotrophic bacteria have been extensively studied, cyanobacterial CSs are not well-understood. Cyanobacteria can produce various metabolites from carbon dioxide. Synechocystis...
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description | Citrate synthase (CS, EC 2.3.3.1) catalyses the initial reaction of the tricarboxylic acid (TCA) cycle. Although CSs from heterotrophic bacteria have been extensively studied, cyanobacterial CSs are not well-understood. Cyanobacteria can produce various metabolites from carbon dioxide.
Synechocystis
sp. PCC 6803 (
Synechocystis
6803) is a cyanobacterium used to synthesize metabolites through metabolic engineering techniques. The production of acetyl-CoA-derived metabolites in
Synechocystis
6803 has been widely examined. However, the biochemical mechanisms of reactions involving acetyl-CoA in
Synechocystis
6803 are poorly understood. We characterised the CS from
Synechocystis
6803 (
Sy
CS) and compared its characteristics with other bacterial CSs.
Sy
CS catalysed only the generation of citrate, and did not catalyse the cleavage of citrate. It is suggested that
Sy
CS is not related to the reductive TCA cycle. The substrate affinity and turnover number of
Sy
CS were lower than those of CSs from heterotrophic bacteria.
Sy
CS was activated by MgCl
2
and CaCl
2
, which inhibit various bacterial CSs.
Sy
CS was not inhibited by ATP and NADH; which are typical feedback inhibitors of other bacterial CSs.
Sy
CS was inhibited by phosphoenolpyruvate and activated by ADP, which has not been reported for CSs from heterotrophic bacteria. Thus,
Sy
CS showed unique characteristics, particularly its sensitivity to effectors. |
doi_str_mv | 10.1038/s41598-019-42659-z |
format | Article |
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Synechocystis
sp. PCC 6803 (
Synechocystis
6803) is a cyanobacterium used to synthesize metabolites through metabolic engineering techniques. The production of acetyl-CoA-derived metabolites in
Synechocystis
6803 has been widely examined. However, the biochemical mechanisms of reactions involving acetyl-CoA in
Synechocystis
6803 are poorly understood. We characterised the CS from
Synechocystis
6803 (
Sy
CS) and compared its characteristics with other bacterial CSs.
Sy
CS catalysed only the generation of citrate, and did not catalyse the cleavage of citrate. It is suggested that
Sy
CS is not related to the reductive TCA cycle. The substrate affinity and turnover number of
Sy
CS were lower than those of CSs from heterotrophic bacteria.
Sy
CS was activated by MgCl
2
and CaCl
2
, which inhibit various bacterial CSs.
Sy
CS was not inhibited by ATP and NADH; which are typical feedback inhibitors of other bacterial CSs.
Sy
CS was inhibited by phosphoenolpyruvate and activated by ADP, which has not been reported for CSs from heterotrophic bacteria. Thus,
Sy
CS showed unique characteristics, particularly its sensitivity to effectors.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/s41598-019-42659-z</identifier><identifier>PMID: 30988396</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/326/41 ; 631/45/607 ; 82/80 ; 82/83 ; Acetyl Coenzyme A - metabolism ; Adenosine diphosphate ; Adenosine Triphosphate - metabolism ; Bacteria ; Bacterial Proteins - metabolism ; Calcium chloride ; Calcium Chloride - metabolism ; Carbon dioxide ; Carbon Dioxide - metabolism ; Citrate (si)-Synthase - metabolism ; Citric Acid - metabolism ; Citric Acid Cycle ; Enzyme Activation ; Heterotrophic bacteria ; Humanities and Social Sciences ; Magnesium chloride ; Magnesium Chloride - metabolism ; Metabolic engineering ; Metabolites ; multidisciplinary ; NADH ; Science ; Science (multidisciplinary) ; Substrate preferences ; Synechocystis ; Synechocystis - enzymology ; Synechocystis - metabolism ; Tricarboxylic acid cycle</subject><ispartof>Scientific reports, 2019-04, Vol.9 (1), p.6038-6038, Article 6038</ispartof><rights>The Author(s) 2019</rights><rights>The Author(s) 2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c577t-b5c0a1e2b9393421b838adf10e2739e349309c2cc0068a208631ea476318888a3</citedby><cites>FETCH-LOGICAL-c577t-b5c0a1e2b9393421b838adf10e2739e349309c2cc0068a208631ea476318888a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6465352/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6465352/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27923,27924,41119,42188,51575,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30988396$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ito, Shoki</creatorcontrib><creatorcontrib>Koyama, Naoto</creatorcontrib><creatorcontrib>Osanai, Takashi</creatorcontrib><title>Citrate synthase from Synechocystis is a distinct class of bacterial citrate synthase</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>Citrate synthase (CS, EC 2.3.3.1) catalyses the initial reaction of the tricarboxylic acid (TCA) cycle. Although CSs from heterotrophic bacteria have been extensively studied, cyanobacterial CSs are not well-understood. Cyanobacteria can produce various metabolites from carbon dioxide.
Synechocystis
sp. PCC 6803 (
Synechocystis
6803) is a cyanobacterium used to synthesize metabolites through metabolic engineering techniques. The production of acetyl-CoA-derived metabolites in
Synechocystis
6803 has been widely examined. However, the biochemical mechanisms of reactions involving acetyl-CoA in
Synechocystis
6803 are poorly understood. We characterised the CS from
Synechocystis
6803 (
Sy
CS) and compared its characteristics with other bacterial CSs.
Sy
CS catalysed only the generation of citrate, and did not catalyse the cleavage of citrate. It is suggested that
Sy
CS is not related to the reductive TCA cycle. The substrate affinity and turnover number of
Sy
CS were lower than those of CSs from heterotrophic bacteria.
Sy
CS was activated by MgCl
2
and CaCl
2
, which inhibit various bacterial CSs.
Sy
CS was not inhibited by ATP and NADH; which are typical feedback inhibitors of other bacterial CSs.
Sy
CS was inhibited by phosphoenolpyruvate and activated by ADP, which has not been reported for CSs from heterotrophic bacteria. Thus,
Sy
CS showed unique characteristics, particularly its sensitivity to effectors.</description><subject>631/326/41</subject><subject>631/45/607</subject><subject>82/80</subject><subject>82/83</subject><subject>Acetyl Coenzyme A - metabolism</subject><subject>Adenosine diphosphate</subject><subject>Adenosine Triphosphate - metabolism</subject><subject>Bacteria</subject><subject>Bacterial Proteins - metabolism</subject><subject>Calcium chloride</subject><subject>Calcium Chloride - metabolism</subject><subject>Carbon dioxide</subject><subject>Carbon Dioxide - metabolism</subject><subject>Citrate (si)-Synthase - metabolism</subject><subject>Citric Acid - metabolism</subject><subject>Citric Acid Cycle</subject><subject>Enzyme Activation</subject><subject>Heterotrophic bacteria</subject><subject>Humanities and Social Sciences</subject><subject>Magnesium chloride</subject><subject>Magnesium Chloride - metabolism</subject><subject>Metabolic engineering</subject><subject>Metabolites</subject><subject>multidisciplinary</subject><subject>NADH</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><subject>Substrate preferences</subject><subject>Synechocystis</subject><subject>Synechocystis - enzymology</subject><subject>Synechocystis - metabolism</subject><subject>Tricarboxylic acid cycle</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kV1LwzAUhoMoTub-gBcS8Mabaj6aNrkRZPgFAy901yHN0q2jbWbSCt2vN65zzl0YAufAec6bc_ICcIHRDUaU3_oYM8EjhEUUk4SJaH0EzgiKWUQoIcd7-QCMvF-icBgRMRanYECR4JyK5AxMx0XjVGOg7-pmobyBubMVfOtqoxdWd74pPAxXwVkR8lo3UJfKe2hzmCndGFeoEuoDkXNwkqvSm9E2DsH08eF9_BxNXp9exveTSLM0baKMaaSwIZmggsYEZ5xyNcsxMiSlwtBYhEE10RqhhCuCeEKxUXEaAg9H0SG463VXbVaZmTZ1mKOUK1dUynXSqkL-rdTFQs7tp0zihFFGgsD1VsDZj9b4RlaF16YsVW1s6yUhGBGWIIEDenWALm3r6rDehgq_y1gaKNJT2lnvncl3w2Akv42TvXEyGCc3xsl1aLrcX2PX8mNTAGgP-FCq58b9vv2P7BeWIKRV</recordid><startdate>20190415</startdate><enddate>20190415</enddate><creator>Ito, Shoki</creator><creator>Koyama, Naoto</creator><creator>Osanai, Takashi</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20190415</creationdate><title>Citrate synthase from Synechocystis is a distinct class of bacterial citrate synthase</title><author>Ito, Shoki ; 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Although CSs from heterotrophic bacteria have been extensively studied, cyanobacterial CSs are not well-understood. Cyanobacteria can produce various metabolites from carbon dioxide.
Synechocystis
sp. PCC 6803 (
Synechocystis
6803) is a cyanobacterium used to synthesize metabolites through metabolic engineering techniques. The production of acetyl-CoA-derived metabolites in
Synechocystis
6803 has been widely examined. However, the biochemical mechanisms of reactions involving acetyl-CoA in
Synechocystis
6803 are poorly understood. We characterised the CS from
Synechocystis
6803 (
Sy
CS) and compared its characteristics with other bacterial CSs.
Sy
CS catalysed only the generation of citrate, and did not catalyse the cleavage of citrate. It is suggested that
Sy
CS is not related to the reductive TCA cycle. The substrate affinity and turnover number of
Sy
CS were lower than those of CSs from heterotrophic bacteria.
Sy
CS was activated by MgCl
2
and CaCl
2
, which inhibit various bacterial CSs.
Sy
CS was not inhibited by ATP and NADH; which are typical feedback inhibitors of other bacterial CSs.
Sy
CS was inhibited by phosphoenolpyruvate and activated by ADP, which has not been reported for CSs from heterotrophic bacteria. Thus,
Sy
CS showed unique characteristics, particularly its sensitivity to effectors.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>30988396</pmid><doi>10.1038/s41598-019-42659-z</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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source | SpringerOpen; MEDLINE; Nature Free; PubMed Central; Directory of Open Access Journals; Free Full-Text Journals in Chemistry; EZB Electronic Journals Library |
subjects | 631/326/41 631/45/607 82/80 82/83 Acetyl Coenzyme A - metabolism Adenosine diphosphate Adenosine Triphosphate - metabolism Bacteria Bacterial Proteins - metabolism Calcium chloride Calcium Chloride - metabolism Carbon dioxide Carbon Dioxide - metabolism Citrate (si)-Synthase - metabolism Citric Acid - metabolism Citric Acid Cycle Enzyme Activation Heterotrophic bacteria Humanities and Social Sciences Magnesium chloride Magnesium Chloride - metabolism Metabolic engineering Metabolites multidisciplinary NADH Science Science (multidisciplinary) Substrate preferences Synechocystis Synechocystis - enzymology Synechocystis - metabolism Tricarboxylic acid cycle |
title | Citrate synthase from Synechocystis is a distinct class of bacterial citrate synthase |
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