Molecular comparison of Neanderthal and Modern Human adenylosuccinate lyase
The availability of genomic data from extinct homini such as Neanderthals has caused a revolution in palaeontology allowing the identification of modern human-specific protein substitutions. Currently, little is known as to how these substitutions alter the proteins on a molecular level. Here, we in...
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description | The availability of genomic data from extinct homini such as Neanderthals has caused a revolution in palaeontology allowing the identification of modern human-specific protein substitutions. Currently, little is known as to how these substitutions alter the proteins on a molecular level. Here, we investigate adenylosuccinate lyase, a conserved enzyme involved in purine metabolism for which several substitutions in the modern human protein (hADSL) have been described to affect intelligence and behaviour. During evolution, modern humans acquired a specific substitution (Ala429Val) in ADSL distinguishing it from the ancestral variant present in Neanderthals (nADSL). We show here that despite this conservative substitution being solvent exposed and located distant from the active site, there is a difference in thermal stability, but not enzymology or ligand binding between nADSL and hADSL. Substitutions near residue 429 which do not profoundly affect enzymology were previously reported to cause neurological symptoms in humans. This study also reveals that ADSL undergoes conformational changes during catalysis which, together with the crystal structure of a hitherto undetermined product bound conformation, explains the molecular origin of disease for several modern human ADSL mutants. |
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Currently, little is known as to how these substitutions alter the proteins on a molecular level. Here, we investigate adenylosuccinate lyase, a conserved enzyme involved in purine metabolism for which several substitutions in the modern human protein (hADSL) have been described to affect intelligence and behaviour. During evolution, modern humans acquired a specific substitution (Ala429Val) in ADSL distinguishing it from the ancestral variant present in Neanderthals (nADSL). We show here that despite this conservative substitution being solvent exposed and located distant from the active site, there is a difference in thermal stability, but not enzymology or ligand binding between nADSL and hADSL. Substitutions near residue 429 which do not profoundly affect enzymology were previously reported to cause neurological symptoms in humans. This study also reveals that ADSL undergoes conformational changes during catalysis which, together with the crystal structure of a hitherto undetermined product bound conformation, explains the molecular origin of disease for several modern human ADSL mutants.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/s41598-018-36195-5</identifier><identifier>PMID: 30573755</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/337 ; 631/535 ; 82 ; 82/83 ; Adenylosuccinate lyase ; Adenylosuccinate Lyase - chemistry ; Adenylosuccinate Lyase - genetics ; Amino Acid Sequence ; Animals ; Catalysis ; Catalytic Domain ; Crystal structure ; Crystallization ; Enzyme Stability ; Evolution, Molecular ; Hominids ; Homo neanderthalensis ; Humanities and Social Sciences ; Humans ; Intelligence ; Models, Molecular ; multidisciplinary ; Mutation, Missense ; Neanderthals - genetics ; Physics ; Protein Conformation ; Science ; Science (multidisciplinary) ; Social Change ; Temperature ; Thermal stability</subject><ispartof>Scientific reports, 2018-12, Vol.8 (1), p.18008-14, Article 18008</ispartof><rights>The Author(s) 2018</rights><rights>2018. 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Currently, little is known as to how these substitutions alter the proteins on a molecular level. Here, we investigate adenylosuccinate lyase, a conserved enzyme involved in purine metabolism for which several substitutions in the modern human protein (hADSL) have been described to affect intelligence and behaviour. During evolution, modern humans acquired a specific substitution (Ala429Val) in ADSL distinguishing it from the ancestral variant present in Neanderthals (nADSL). We show here that despite this conservative substitution being solvent exposed and located distant from the active site, there is a difference in thermal stability, but not enzymology or ligand binding between nADSL and hADSL. Substitutions near residue 429 which do not profoundly affect enzymology were previously reported to cause neurological symptoms in humans. This study also reveals that ADSL undergoes conformational changes during catalysis which, together with the crystal structure of a hitherto undetermined product bound conformation, explains the molecular origin of disease for several modern human ADSL mutants.</description><subject>631/337</subject><subject>631/535</subject><subject>82</subject><subject>82/83</subject><subject>Adenylosuccinate lyase</subject><subject>Adenylosuccinate Lyase - chemistry</subject><subject>Adenylosuccinate Lyase - genetics</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Catalysis</subject><subject>Catalytic Domain</subject><subject>Crystal structure</subject><subject>Crystallization</subject><subject>Enzyme Stability</subject><subject>Evolution, Molecular</subject><subject>Hominids</subject><subject>Homo neanderthalensis</subject><subject>Humanities and Social Sciences</subject><subject>Humans</subject><subject>Intelligence</subject><subject>Models, Molecular</subject><subject>multidisciplinary</subject><subject>Mutation, Missense</subject><subject>Neanderthals - 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chemistry</topic><topic>Adenylosuccinate Lyase - genetics</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Catalysis</topic><topic>Catalytic Domain</topic><topic>Crystal structure</topic><topic>Crystallization</topic><topic>Enzyme Stability</topic><topic>Evolution, Molecular</topic><topic>Hominids</topic><topic>Homo neanderthalensis</topic><topic>Humanities and Social Sciences</topic><topic>Humans</topic><topic>Intelligence</topic><topic>Models, Molecular</topic><topic>multidisciplinary</topic><topic>Mutation, Missense</topic><topic>Neanderthals - genetics</topic><topic>Physics</topic><topic>Protein Conformation</topic><topic>Science</topic><topic>Science (multidisciplinary)</topic><topic>Social Change</topic><topic>Temperature</topic><topic>Thermal stability</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Van Laer, Bart</creatorcontrib><creatorcontrib>Kapp, Ulrike</creatorcontrib><creatorcontrib>Soler-Lopez, Montserrat</creatorcontrib><creatorcontrib>Moczulska, Kaja</creatorcontrib><creatorcontrib>Pääbo, Svante</creatorcontrib><creatorcontrib>Leonard, Gordon</creatorcontrib><creatorcontrib>Mueller-Dieckmann, Christoph</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Access via ProQuest (Open Access)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Scientific reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Van Laer, Bart</au><au>Kapp, Ulrike</au><au>Soler-Lopez, Montserrat</au><au>Moczulska, Kaja</au><au>Pääbo, Svante</au><au>Leonard, Gordon</au><au>Mueller-Dieckmann, Christoph</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular comparison of Neanderthal and Modern Human adenylosuccinate lyase</atitle><jtitle>Scientific reports</jtitle><stitle>Sci Rep</stitle><addtitle>Sci Rep</addtitle><date>2018-12-20</date><risdate>2018</risdate><volume>8</volume><issue>1</issue><spage>18008</spage><epage>14</epage><pages>18008-14</pages><artnum>18008</artnum><issn>2045-2322</issn><eissn>2045-2322</eissn><abstract>The availability of genomic data from extinct homini such as Neanderthals has caused a revolution in palaeontology allowing the identification of modern human-specific protein substitutions. Currently, little is known as to how these substitutions alter the proteins on a molecular level. Here, we investigate adenylosuccinate lyase, a conserved enzyme involved in purine metabolism for which several substitutions in the modern human protein (hADSL) have been described to affect intelligence and behaviour. During evolution, modern humans acquired a specific substitution (Ala429Val) in ADSL distinguishing it from the ancestral variant present in Neanderthals (nADSL). We show here that despite this conservative substitution being solvent exposed and located distant from the active site, there is a difference in thermal stability, but not enzymology or ligand binding between nADSL and hADSL. Substitutions near residue 429 which do not profoundly affect enzymology were previously reported to cause neurological symptoms in humans. This study also reveals that ADSL undergoes conformational changes during catalysis which, together with the crystal structure of a hitherto undetermined product bound conformation, explains the molecular origin of disease for several modern human ADSL mutants.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>30573755</pmid><doi>10.1038/s41598-018-36195-5</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 631/337 631/535 82 82/83 Adenylosuccinate lyase Adenylosuccinate Lyase - chemistry Adenylosuccinate Lyase - genetics Amino Acid Sequence Animals Catalysis Catalytic Domain Crystal structure Crystallization Enzyme Stability Evolution, Molecular Hominids Homo neanderthalensis Humanities and Social Sciences Humans Intelligence Models, Molecular multidisciplinary Mutation, Missense Neanderthals - genetics Physics Protein Conformation Science Science (multidisciplinary) Social Change Temperature Thermal stability |
title | Molecular comparison of Neanderthal and Modern Human adenylosuccinate lyase |
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