High‐efficiency genome editing using a dmc1 promoter‐controlled CRISPR/Cas9 system in maize
Summary Previous studies revealed that the promoters for driving both Cas9 and sgRNAs are quite important for efficient genome editing by CRISPR/Cas9 in plants. Here, we report our results of targeted genome editing using the maize dmc1 gene promoter combined with the U3 promoter for Cas9 and sgRNA,...
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Veröffentlicht in: | Plant biotechnology journal 2018-11, Vol.16 (11), p.1848-1857 |
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container_title | Plant biotechnology journal |
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creator | Feng, Chao Su, Handong Bai, Han Wang, Rui Liu, Yalin Guo, Xianrui Liu, Chang Zhang, Jing Yuan, Jing Birchler, James A. Han, Fangpu |
description | Summary
Previous studies revealed that the promoters for driving both Cas9 and sgRNAs are quite important for efficient genome editing by CRISPR/Cas9 in plants. Here, we report our results of targeted genome editing using the maize dmc1 gene promoter combined with the U3 promoter for Cas9 and sgRNA, respectively. Three loci in the maize genome were selected for targeting. The T0 plants regenerated were highly efficiently edited at the target sites with homozygous or bi‐allelic mutants accounting for about 66%. The mutations in T0 plants could be stably transmitted to the T1 generation, and new mutations could be generated in gametes or zygotes. Whole‐genome resequencing indicated that no off‐target mutations could be detected in the predicted loci with sequence similarity to the targeted site. Our results show that the dmc1 promoter‐controlled (DPC) CRISPR/Cas9 system is highly efficient in maize and provide further evidence that the optimization of the promoters used for the CRISPR/Cas9 system is important for enhancing the efficiency of targeted genome editing in plants. The evolutionary conservation of the dmc1 gene suggests its potential for use in other plant species. |
doi_str_mv | 10.1111/pbi.12920 |
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Previous studies revealed that the promoters for driving both Cas9 and sgRNAs are quite important for efficient genome editing by CRISPR/Cas9 in plants. Here, we report our results of targeted genome editing using the maize dmc1 gene promoter combined with the U3 promoter for Cas9 and sgRNA, respectively. Three loci in the maize genome were selected for targeting. The T0 plants regenerated were highly efficiently edited at the target sites with homozygous or bi‐allelic mutants accounting for about 66%. The mutations in T0 plants could be stably transmitted to the T1 generation, and new mutations could be generated in gametes or zygotes. Whole‐genome resequencing indicated that no off‐target mutations could be detected in the predicted loci with sequence similarity to the targeted site. Our results show that the dmc1 promoter‐controlled (DPC) CRISPR/Cas9 system is highly efficient in maize and provide further evidence that the optimization of the promoters used for the CRISPR/Cas9 system is important for enhancing the efficiency of targeted genome editing in plants. The evolutionary conservation of the dmc1 gene suggests its potential for use in other plant species.</description><identifier>ISSN: 1467-7644</identifier><identifier>EISSN: 1467-7652</identifier><identifier>DOI: 10.1111/pbi.12920</identifier><identifier>PMID: 29569825</identifier><language>eng</language><publisher>England: John Wiley & Sons, Inc</publisher><subject>biotechnology ; Corn ; CRISPR ; CRISPR-Cas systems ; CRISPR/Cas9 ; DMC1 gene ; dmc1 promoter ; Editing ; Evolution ; Evolutionary conservation ; Gametes ; genes ; Genomes ; Genomics ; homozygosity ; Loci ; maize ; Mutation ; Plant genetics ; Plant species ; Plants ; Promoters ; sequence homology ; Target detection ; targeted genome editing ; Zygotes</subject><ispartof>Plant biotechnology journal, 2018-11, Vol.16 (11), p.1848-1857</ispartof><rights>2018 The Authors. published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd.</rights><rights>2018 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd.</rights><rights>COPYRIGHT 2018 John Wiley & Sons, Inc.</rights><rights>2018. This work is published under https://creativecommons.org/licenses/by/4.0/ (the "License"). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5810-30db031123423e1f1f8f7ca96db79f3a41ebe375080e2deecb9f2fce3ef03ccb3</citedby><cites>FETCH-LOGICAL-c5810-30db031123423e1f1f8f7ca96db79f3a41ebe375080e2deecb9f2fce3ef03ccb3</cites><orcidid>0000-0001-8393-3575</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fpbi.12920$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fpbi.12920$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,860,881,1411,11543,27903,27904,45553,45554,46030,46454</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29569825$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Feng, Chao</creatorcontrib><creatorcontrib>Su, Handong</creatorcontrib><creatorcontrib>Bai, Han</creatorcontrib><creatorcontrib>Wang, Rui</creatorcontrib><creatorcontrib>Liu, Yalin</creatorcontrib><creatorcontrib>Guo, Xianrui</creatorcontrib><creatorcontrib>Liu, Chang</creatorcontrib><creatorcontrib>Zhang, Jing</creatorcontrib><creatorcontrib>Yuan, Jing</creatorcontrib><creatorcontrib>Birchler, James A.</creatorcontrib><creatorcontrib>Han, Fangpu</creatorcontrib><title>High‐efficiency genome editing using a dmc1 promoter‐controlled CRISPR/Cas9 system in maize</title><title>Plant biotechnology journal</title><addtitle>Plant Biotechnol J</addtitle><description>Summary
Previous studies revealed that the promoters for driving both Cas9 and sgRNAs are quite important for efficient genome editing by CRISPR/Cas9 in plants. Here, we report our results of targeted genome editing using the maize dmc1 gene promoter combined with the U3 promoter for Cas9 and sgRNA, respectively. Three loci in the maize genome were selected for targeting. The T0 plants regenerated were highly efficiently edited at the target sites with homozygous or bi‐allelic mutants accounting for about 66%. The mutations in T0 plants could be stably transmitted to the T1 generation, and new mutations could be generated in gametes or zygotes. Whole‐genome resequencing indicated that no off‐target mutations could be detected in the predicted loci with sequence similarity to the targeted site. Our results show that the dmc1 promoter‐controlled (DPC) CRISPR/Cas9 system is highly efficient in maize and provide further evidence that the optimization of the promoters used for the CRISPR/Cas9 system is important for enhancing the efficiency of targeted genome editing in plants. The evolutionary conservation of the dmc1 gene suggests its potential for use in other plant species.</description><subject>biotechnology</subject><subject>Corn</subject><subject>CRISPR</subject><subject>CRISPR-Cas systems</subject><subject>CRISPR/Cas9</subject><subject>DMC1 gene</subject><subject>dmc1 promoter</subject><subject>Editing</subject><subject>Evolution</subject><subject>Evolutionary conservation</subject><subject>Gametes</subject><subject>genes</subject><subject>Genomes</subject><subject>Genomics</subject><subject>homozygosity</subject><subject>Loci</subject><subject>maize</subject><subject>Mutation</subject><subject>Plant genetics</subject><subject>Plant species</subject><subject>Plants</subject><subject>Promoters</subject><subject>sequence homology</subject><subject>Target detection</subject><subject>targeted genome editing</subject><subject>Zygotes</subject><issn>1467-7644</issn><issn>1467-7652</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>BENPR</sourceid><recordid>eNqFksFu1DAQhiMEoqVw4AWQJS5w2F2PHSfxBamsCl2pElWBs-U449RVYi9xAtqeeASekSfBS8oKkBC2ZFv2N_-Mf02WPQW6hDRW29otgUlG72XHkBfloiwEu3845_lR9ijGG0oZFKJ4mB0xKQpZMXGcqXPXXn__-g2tdcahNzvSog89Emzc6HxLprhfNWl6A2Q7hD6MOKQIE_w4hK7DhqyvNu8vr1ZrHSWJuzhiT5wnvXa3-Dh7YHUX8cndfpJ9fHP2YX2-uHj3drM-vVgYUQFdcNrUlAMwnjOOYMFWtjRaFk1dSst1DlgjLwWtKLIG0dTSMmuQo6XcmJqfZK9m3e1U99gYTMXpTm0H1-thp4J26s8X765VGz6rAipgwJPAizuBIXyaMI6qd9Fg12mPYYqKCZZKA5nn_0cpVBSS7zKhz_9Cb8I0-OSEYgBlJcqC7nMvZ6rVHSrnbUglmjQb7F3yGa1L96cl5yznQlYp4OUcYIYQ44D28FGgat8SKrWE-tkSiX32uzMH8lcPJGA1A19Slt2_ldTl680s-QPR3MIU</recordid><startdate>201811</startdate><enddate>201811</enddate><creator>Feng, Chao</creator><creator>Su, Handong</creator><creator>Bai, Han</creator><creator>Wang, Rui</creator><creator>Liu, Yalin</creator><creator>Guo, Xianrui</creator><creator>Liu, Chang</creator><creator>Zhang, Jing</creator><creator>Yuan, Jing</creator><creator>Birchler, James A.</creator><creator>Han, Fangpu</creator><general>John Wiley & Sons, Inc</general><general>John Wiley and Sons Inc</general><scope>24P</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>L6V</scope><scope>LK8</scope><scope>M7P</scope><scope>M7S</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-8393-3575</orcidid></search><sort><creationdate>201811</creationdate><title>High‐efficiency genome editing using a dmc1 promoter‐controlled CRISPR/Cas9 system in maize</title><author>Feng, Chao ; Su, Handong ; Bai, Han ; Wang, Rui ; Liu, Yalin ; Guo, Xianrui ; Liu, Chang ; Zhang, Jing ; Yuan, Jing ; Birchler, James A. ; Han, Fangpu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5810-30db031123423e1f1f8f7ca96db79f3a41ebe375080e2deecb9f2fce3ef03ccb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>biotechnology</topic><topic>Corn</topic><topic>CRISPR</topic><topic>CRISPR-Cas systems</topic><topic>CRISPR/Cas9</topic><topic>DMC1 gene</topic><topic>dmc1 promoter</topic><topic>Editing</topic><topic>Evolution</topic><topic>Evolutionary conservation</topic><topic>Gametes</topic><topic>genes</topic><topic>Genomes</topic><topic>Genomics</topic><topic>homozygosity</topic><topic>Loci</topic><topic>maize</topic><topic>Mutation</topic><topic>Plant genetics</topic><topic>Plant species</topic><topic>Plants</topic><topic>Promoters</topic><topic>sequence homology</topic><topic>Target detection</topic><topic>targeted genome editing</topic><topic>Zygotes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Feng, Chao</creatorcontrib><creatorcontrib>Su, Handong</creatorcontrib><creatorcontrib>Bai, Han</creatorcontrib><creatorcontrib>Wang, Rui</creatorcontrib><creatorcontrib>Liu, Yalin</creatorcontrib><creatorcontrib>Guo, Xianrui</creatorcontrib><creatorcontrib>Liu, Chang</creatorcontrib><creatorcontrib>Zhang, Jing</creatorcontrib><creatorcontrib>Yuan, Jing</creatorcontrib><creatorcontrib>Birchler, James A.</creatorcontrib><creatorcontrib>Han, Fangpu</creatorcontrib><collection>Wiley-Blackwell Open Access Collection</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Databases</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Engineering Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Engineering Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering Collection</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Plant biotechnology journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Feng, Chao</au><au>Su, Handong</au><au>Bai, Han</au><au>Wang, Rui</au><au>Liu, Yalin</au><au>Guo, Xianrui</au><au>Liu, Chang</au><au>Zhang, Jing</au><au>Yuan, Jing</au><au>Birchler, James A.</au><au>Han, Fangpu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>High‐efficiency genome editing using a dmc1 promoter‐controlled CRISPR/Cas9 system in maize</atitle><jtitle>Plant biotechnology journal</jtitle><addtitle>Plant Biotechnol J</addtitle><date>2018-11</date><risdate>2018</risdate><volume>16</volume><issue>11</issue><spage>1848</spage><epage>1857</epage><pages>1848-1857</pages><issn>1467-7644</issn><eissn>1467-7652</eissn><abstract>Summary
Previous studies revealed that the promoters for driving both Cas9 and sgRNAs are quite important for efficient genome editing by CRISPR/Cas9 in plants. Here, we report our results of targeted genome editing using the maize dmc1 gene promoter combined with the U3 promoter for Cas9 and sgRNA, respectively. Three loci in the maize genome were selected for targeting. The T0 plants regenerated were highly efficiently edited at the target sites with homozygous or bi‐allelic mutants accounting for about 66%. The mutations in T0 plants could be stably transmitted to the T1 generation, and new mutations could be generated in gametes or zygotes. Whole‐genome resequencing indicated that no off‐target mutations could be detected in the predicted loci with sequence similarity to the targeted site. Our results show that the dmc1 promoter‐controlled (DPC) CRISPR/Cas9 system is highly efficient in maize and provide further evidence that the optimization of the promoters used for the CRISPR/Cas9 system is important for enhancing the efficiency of targeted genome editing in plants. The evolutionary conservation of the dmc1 gene suggests its potential for use in other plant species.</abstract><cop>England</cop><pub>John Wiley & Sons, Inc</pub><pmid>29569825</pmid><doi>10.1111/pbi.12920</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0001-8393-3575</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | biotechnology Corn CRISPR CRISPR-Cas systems CRISPR/Cas9 DMC1 gene dmc1 promoter Editing Evolution Evolutionary conservation Gametes genes Genomes Genomics homozygosity Loci maize Mutation Plant genetics Plant species Plants Promoters sequence homology Target detection targeted genome editing Zygotes |
title | High‐efficiency genome editing using a dmc1 promoter‐controlled CRISPR/Cas9 system in maize |
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