Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis

Much of the research that has been done on prostate cancer tissue biomarkers has relied on radical prostatectomies for biospecimens. However, it is well recognized that important groups of patients are under-represented or missing entirely from biorepository collections of radical prostatectomy spec...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Translational andrology and urology 2018-09, Vol.7 (Suppl 4), p.S514-S518
Hauptverfasser: Gaston, Sandra M, Grizzle, William E, Rais-Bahrami, Soroush, Kearney, Gary P
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page S518
container_issue Suppl 4
container_start_page S514
container_title Translational andrology and urology
container_volume 7
creator Gaston, Sandra M
Grizzle, William E
Rais-Bahrami, Soroush
Kearney, Gary P
description Much of the research that has been done on prostate cancer tissue biomarkers has relied on radical prostatectomies for biospecimens. However, it is well recognized that important groups of patients are under-represented or missing entirely from biorepository collections of radical prostatectomy specimens. Using prostate biopsy tissues for molecular biomarker research significantly expands the range of available patients to include men whose biopsies show no cancer as well as men who are treated non-surgically or who choose active surveillance. However, one of the challenges of biopsy-based biomarker research is the limited amount of tissue that can be obtained from each core. To address this challenge, we have developed and fully implemented innovative biopsy tissue print technologies that allow us to obtain high quality RNA and DNA from each biopsy core without compromising the specimen for a pathologic diagnosis. Prostate biopsy tissue print samples have been successfully utilized for gene expression profiling, genotyping, DNA methylation and sequencing analyses. Emerging biopsy tissue print applications include studies using viable cells to study tumor metabolism and drug response.
doi_str_mv 10.21037/tau.2018.09.01
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6178309</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2126905827</sourcerecordid><originalsourceid>FETCH-LOGICAL-c347t-49888643f5a5c06a9b4f8975c3880c1a4311573f8840e9acad0e7e1cf91388393</originalsourceid><addsrcrecordid>eNpVkU9P3DAQxa0KVNDCubfKRy67jO38sXuohKBQJARS1Z6tWa-TuEriYDtb7Tfqx6wXKILTWH6_eWPPI-QTgxVnIOrzhPOKA5MrUCtgH8gx51wsi0qxgzfnI3Ia428AYFzIomIfyZEAUYmSVcfk771LwRvb93Pvo6XJxThbOgU3pviF4kjdOPotJre1FKcpeDQdTT4TdsJMtbRzbUcfZ-xd2tGr-4vctKE_cm2CHzLnY8Jk6dr5KTob6R-XOj8navyQxcHFvUnqbL4IWW58oBNmpPftjm4ctqOPLp6Qwwb7aE9f6oL8uv728_L78u7h5vby4m5pRFGnZaGklFUhmhJLAxWqddFIVZdGSAmGYSEYK2vRSFmAVWhwA7a2zDSKZUIosSBfn32neT3YjbFjCtjrvJABw057dPq9MrpOt36rK1ZLAXuDsxeD4B9nG5POX9wvGEfr56g545WCUvI6o-fPqMlLisE2r2MY6KeIdY5Y7yPWoDSw3PH57ete-f-Bin_Isqc3</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2126905827</pqid></control><display><type>article</type><title>Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis</title><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><creator>Gaston, Sandra M ; Grizzle, William E ; Rais-Bahrami, Soroush ; Kearney, Gary P</creator><creatorcontrib>Gaston, Sandra M ; Grizzle, William E ; Rais-Bahrami, Soroush ; Kearney, Gary P</creatorcontrib><description>Much of the research that has been done on prostate cancer tissue biomarkers has relied on radical prostatectomies for biospecimens. However, it is well recognized that important groups of patients are under-represented or missing entirely from biorepository collections of radical prostatectomy specimens. Using prostate biopsy tissues for molecular biomarker research significantly expands the range of available patients to include men whose biopsies show no cancer as well as men who are treated non-surgically or who choose active surveillance. However, one of the challenges of biopsy-based biomarker research is the limited amount of tissue that can be obtained from each core. To address this challenge, we have developed and fully implemented innovative biopsy tissue print technologies that allow us to obtain high quality RNA and DNA from each biopsy core without compromising the specimen for a pathologic diagnosis. Prostate biopsy tissue print samples have been successfully utilized for gene expression profiling, genotyping, DNA methylation and sequencing analyses. Emerging biopsy tissue print applications include studies using viable cells to study tumor metabolism and drug response.</description><identifier>ISSN: 2223-4691</identifier><identifier>ISSN: 2223-4683</identifier><identifier>EISSN: 2223-4691</identifier><identifier>DOI: 10.21037/tau.2018.09.01</identifier><identifier>PMID: 30363516</identifier><language>eng</language><publisher>China: AME Publishing Company</publisher><subject>Technical Note</subject><ispartof>Translational andrology and urology, 2018-09, Vol.7 (Suppl 4), p.S514-S518</ispartof><rights>2018 Translational Andrology and Urology. All rights reserved. 2018 Translational Andrology and Urology.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6178309/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6178309/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27923,27924,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30363516$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gaston, Sandra M</creatorcontrib><creatorcontrib>Grizzle, William E</creatorcontrib><creatorcontrib>Rais-Bahrami, Soroush</creatorcontrib><creatorcontrib>Kearney, Gary P</creatorcontrib><title>Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis</title><title>Translational andrology and urology</title><addtitle>Transl Androl Urol</addtitle><description>Much of the research that has been done on prostate cancer tissue biomarkers has relied on radical prostatectomies for biospecimens. However, it is well recognized that important groups of patients are under-represented or missing entirely from biorepository collections of radical prostatectomy specimens. Using prostate biopsy tissues for molecular biomarker research significantly expands the range of available patients to include men whose biopsies show no cancer as well as men who are treated non-surgically or who choose active surveillance. However, one of the challenges of biopsy-based biomarker research is the limited amount of tissue that can be obtained from each core. To address this challenge, we have developed and fully implemented innovative biopsy tissue print technologies that allow us to obtain high quality RNA and DNA from each biopsy core without compromising the specimen for a pathologic diagnosis. Prostate biopsy tissue print samples have been successfully utilized for gene expression profiling, genotyping, DNA methylation and sequencing analyses. Emerging biopsy tissue print applications include studies using viable cells to study tumor metabolism and drug response.</description><subject>Technical Note</subject><issn>2223-4691</issn><issn>2223-4683</issn><issn>2223-4691</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNpVkU9P3DAQxa0KVNDCubfKRy67jO38sXuohKBQJARS1Z6tWa-TuEriYDtb7Tfqx6wXKILTWH6_eWPPI-QTgxVnIOrzhPOKA5MrUCtgH8gx51wsi0qxgzfnI3Ia428AYFzIomIfyZEAUYmSVcfk771LwRvb93Pvo6XJxThbOgU3pviF4kjdOPotJre1FKcpeDQdTT4TdsJMtbRzbUcfZ-xd2tGr-4vctKE_cm2CHzLnY8Jk6dr5KTob6R-XOj8navyQxcHFvUnqbL4IWW58oBNmpPftjm4ctqOPLp6Qwwb7aE9f6oL8uv728_L78u7h5vby4m5pRFGnZaGklFUhmhJLAxWqddFIVZdGSAmGYSEYK2vRSFmAVWhwA7a2zDSKZUIosSBfn32neT3YjbFjCtjrvJABw057dPq9MrpOt36rK1ZLAXuDsxeD4B9nG5POX9wvGEfr56g545WCUvI6o-fPqMlLisE2r2MY6KeIdY5Y7yPWoDSw3PH57ete-f-Bin_Isqc3</recordid><startdate>201809</startdate><enddate>201809</enddate><creator>Gaston, Sandra M</creator><creator>Grizzle, William E</creator><creator>Rais-Bahrami, Soroush</creator><creator>Kearney, Gary P</creator><general>AME Publishing Company</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201809</creationdate><title>Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis</title><author>Gaston, Sandra M ; Grizzle, William E ; Rais-Bahrami, Soroush ; Kearney, Gary P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c347t-49888643f5a5c06a9b4f8975c3880c1a4311573f8840e9acad0e7e1cf91388393</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Technical Note</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gaston, Sandra M</creatorcontrib><creatorcontrib>Grizzle, William E</creatorcontrib><creatorcontrib>Rais-Bahrami, Soroush</creatorcontrib><creatorcontrib>Kearney, Gary P</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Translational andrology and urology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gaston, Sandra M</au><au>Grizzle, William E</au><au>Rais-Bahrami, Soroush</au><au>Kearney, Gary P</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis</atitle><jtitle>Translational andrology and urology</jtitle><addtitle>Transl Androl Urol</addtitle><date>2018-09</date><risdate>2018</risdate><volume>7</volume><issue>Suppl 4</issue><spage>S514</spage><epage>S518</epage><pages>S514-S518</pages><issn>2223-4691</issn><issn>2223-4683</issn><eissn>2223-4691</eissn><abstract>Much of the research that has been done on prostate cancer tissue biomarkers has relied on radical prostatectomies for biospecimens. However, it is well recognized that important groups of patients are under-represented or missing entirely from biorepository collections of radical prostatectomy specimens. Using prostate biopsy tissues for molecular biomarker research significantly expands the range of available patients to include men whose biopsies show no cancer as well as men who are treated non-surgically or who choose active surveillance. However, one of the challenges of biopsy-based biomarker research is the limited amount of tissue that can be obtained from each core. To address this challenge, we have developed and fully implemented innovative biopsy tissue print technologies that allow us to obtain high quality RNA and DNA from each biopsy core without compromising the specimen for a pathologic diagnosis. Prostate biopsy tissue print samples have been successfully utilized for gene expression profiling, genotyping, DNA methylation and sequencing analyses. Emerging biopsy tissue print applications include studies using viable cells to study tumor metabolism and drug response.</abstract><cop>China</cop><pub>AME Publishing Company</pub><pmid>30363516</pmid><doi>10.21037/tau.2018.09.01</doi><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2223-4691
ispartof Translational andrology and urology, 2018-09, Vol.7 (Suppl 4), p.S514-S518
issn 2223-4691
2223-4683
2223-4691
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6178309
source Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central
subjects Technical Note
title Nitrocellulose tissue prints: an innovative approach to preparing high quality DNA and RNA from prostate biopsies without compromising the cores for pathology diagnosis
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-11T15%3A41%3A37IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Nitrocellulose%20tissue%20prints:%20an%20innovative%20approach%20to%20preparing%20high%20quality%20DNA%20and%20RNA%20from%20prostate%20biopsies%20without%20compromising%20the%20cores%20for%20pathology%20diagnosis&rft.jtitle=Translational%20andrology%20and%20urology&rft.au=Gaston,%20Sandra%20M&rft.date=2018-09&rft.volume=7&rft.issue=Suppl%204&rft.spage=S514&rft.epage=S518&rft.pages=S514-S518&rft.issn=2223-4691&rft.eissn=2223-4691&rft_id=info:doi/10.21037/tau.2018.09.01&rft_dat=%3Cproquest_pubme%3E2126905827%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2126905827&rft_id=info:pmid/30363516&rfr_iscdi=true