Using disruptive insertional mutagenesis to identify the in situ structure‐function landscape of the Shigella translocator protein IpaB
Bacterial type III secretion systems (T3SS) are used to inject proteins into mammalian cells to subvert cellular functions. The Shigella T3SS apparatus (T3SA) is comprised of a basal body, cytoplasmic sorting platform and exposed needle with needle “tip complex” (TC). TC maturation occurs when the t...
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creator | Barta, Michael L. Tachiyama, Shoichi Muthuramalingam, Meenakumari Arizmendi, Olivia Villanueva, Cecilia E. Ramyar, Kasra X. Geisbrecht, Brian V. Lovell, Scott Battaile, Kevin P. Picking, Wendy L. Picking, William D. |
description | Bacterial type III secretion systems (T3SS) are used to inject proteins into mammalian cells to subvert cellular functions. The Shigella T3SS apparatus (T3SA) is comprised of a basal body, cytoplasmic sorting platform and exposed needle with needle “tip complex” (TC). TC maturation occurs when the translocator protein IpaB is recruited to the needle tip where both IpaD and IpaB control secretion induction. IpaB insertion into the host membrane is the first step of translocon pore formation and secretion induction. We employed disruptive insertional mutagenesis, using bacteriophage T4 lysozyme (T4L), within predicted IpaB loops to show how topological features affect TC functions (secretion control, translocon formation and effector secretion). Insertions within the N‐terminal half of IpaB were most likely to result in a loss of steady‐state secretion control, however, all but the two that were not recognized by the T3SA retained nearly wild‐type hemolysis (translocon formation) and invasiveness levels (effector secretion). In contrast, all but one insertion in the C‐terminal half of IpaB maintained secretion control but were impaired for hemolysis and invasion. These nature of the data suggest the latter mutants are defective in a post‐secretion event, most likely due to impaired interactions with the second translocator protein IpaC. Intriguingly, only two insertion mutants displayed readily detectable T4L on the bacterial surface. The data create a picture in which the makeup and structure of a functional T3SA TC is highly amenable to physical perturbation, indicating that the tertiary structure of IpaB within the TC is more plastic than previously realized. |
doi_str_mv | 10.1002/pro.3428 |
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The Shigella T3SS apparatus (T3SA) is comprised of a basal body, cytoplasmic sorting platform and exposed needle with needle “tip complex” (TC). TC maturation occurs when the translocator protein IpaB is recruited to the needle tip where both IpaD and IpaB control secretion induction. IpaB insertion into the host membrane is the first step of translocon pore formation and secretion induction. We employed disruptive insertional mutagenesis, using bacteriophage T4 lysozyme (T4L), within predicted IpaB loops to show how topological features affect TC functions (secretion control, translocon formation and effector secretion). Insertions within the N‐terminal half of IpaB were most likely to result in a loss of steady‐state secretion control, however, all but the two that were not recognized by the T3SA retained nearly wild‐type hemolysis (translocon formation) and invasiveness levels (effector secretion). In contrast, all but one insertion in the C‐terminal half of IpaB maintained secretion control but were impaired for hemolysis and invasion. These nature of the data suggest the latter mutants are defective in a post‐secretion event, most likely due to impaired interactions with the second translocator protein IpaC. Intriguingly, only two insertion mutants displayed readily detectable T4L on the bacterial surface. The data create a picture in which the makeup and structure of a functional T3SA TC is highly amenable to physical perturbation, indicating that the tertiary structure of IpaB within the TC is more plastic than previously realized.</description><identifier>ISSN: 0961-8368</identifier><identifier>EISSN: 1469-896X</identifier><identifier>DOI: 10.1002/pro.3428</identifier><identifier>PMID: 29672980</identifier><language>eng</language><publisher>United States: Wiley Subscription Services, Inc</publisher><subject>Animals ; Antigens, Bacterial - chemistry ; Antigens, Bacterial - genetics ; Antigens, Bacterial - metabolism ; Antigens, Bacterial - physiology ; Bacterial Proteins - chemistry ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Bacterial Proteins - physiology ; Cells, Cultured ; Erythrocytes ; Full‐Length Papers ; Hemolysis ; Insertion ; Insertional mutagenesis ; Invasiveness ; IpaB ; Lysozyme ; Mammalian cells ; Mutagenesis ; Mutagenesis, Insertional - methods ; Mutants ; Perturbation ; Pore formation ; Protein structure ; Proteins ; Secretion ; Sheep ; Shigella ; Structure-function relationships ; Tertiary structure ; translocon ; type III secretion ; Type III Secretion Systems ; X-Ray Diffraction</subject><ispartof>Protein science, 2018-08, Vol.27 (8), p.1392-1406</ispartof><rights>2018 The Protein Society</rights><rights>2018 The Protein Society.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4388-4eee2a41ff273a3fb03af731f5cc55612a89c77cf631c6c61c36103ffd3f43ee3</citedby><cites>FETCH-LOGICAL-c4388-4eee2a41ff273a3fb03af731f5cc55612a89c77cf631c6c61c36103ffd3f43ee3</cites><orcidid>0000-0001-5635-325X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6153406/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6153406/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,1417,1433,27924,27925,45574,45575,46409,46833,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29672980$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Barta, Michael L.</creatorcontrib><creatorcontrib>Tachiyama, Shoichi</creatorcontrib><creatorcontrib>Muthuramalingam, Meenakumari</creatorcontrib><creatorcontrib>Arizmendi, Olivia</creatorcontrib><creatorcontrib>Villanueva, Cecilia E.</creatorcontrib><creatorcontrib>Ramyar, Kasra X.</creatorcontrib><creatorcontrib>Geisbrecht, Brian V.</creatorcontrib><creatorcontrib>Lovell, Scott</creatorcontrib><creatorcontrib>Battaile, Kevin P.</creatorcontrib><creatorcontrib>Picking, Wendy L.</creatorcontrib><creatorcontrib>Picking, William D.</creatorcontrib><title>Using disruptive insertional mutagenesis to identify the in situ structure‐function landscape of the Shigella translocator protein IpaB</title><title>Protein science</title><addtitle>Protein Sci</addtitle><description>Bacterial type III secretion systems (T3SS) are used to inject proteins into mammalian cells to subvert cellular functions. The Shigella T3SS apparatus (T3SA) is comprised of a basal body, cytoplasmic sorting platform and exposed needle with needle “tip complex” (TC). TC maturation occurs when the translocator protein IpaB is recruited to the needle tip where both IpaD and IpaB control secretion induction. IpaB insertion into the host membrane is the first step of translocon pore formation and secretion induction. We employed disruptive insertional mutagenesis, using bacteriophage T4 lysozyme (T4L), within predicted IpaB loops to show how topological features affect TC functions (secretion control, translocon formation and effector secretion). Insertions within the N‐terminal half of IpaB were most likely to result in a loss of steady‐state secretion control, however, all but the two that were not recognized by the T3SA retained nearly wild‐type hemolysis (translocon formation) and invasiveness levels (effector secretion). In contrast, all but one insertion in the C‐terminal half of IpaB maintained secretion control but were impaired for hemolysis and invasion. These nature of the data suggest the latter mutants are defective in a post‐secretion event, most likely due to impaired interactions with the second translocator protein IpaC. Intriguingly, only two insertion mutants displayed readily detectable T4L on the bacterial surface. The data create a picture in which the makeup and structure of a functional T3SA TC is highly amenable to physical perturbation, indicating that the tertiary structure of IpaB within the TC is more plastic than previously realized.</description><subject>Animals</subject><subject>Antigens, Bacterial - chemistry</subject><subject>Antigens, Bacterial - genetics</subject><subject>Antigens, Bacterial - metabolism</subject><subject>Antigens, Bacterial - physiology</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Bacterial Proteins - physiology</subject><subject>Cells, Cultured</subject><subject>Erythrocytes</subject><subject>Full‐Length Papers</subject><subject>Hemolysis</subject><subject>Insertion</subject><subject>Insertional mutagenesis</subject><subject>Invasiveness</subject><subject>IpaB</subject><subject>Lysozyme</subject><subject>Mammalian cells</subject><subject>Mutagenesis</subject><subject>Mutagenesis, Insertional - methods</subject><subject>Mutants</subject><subject>Perturbation</subject><subject>Pore formation</subject><subject>Protein structure</subject><subject>Proteins</subject><subject>Secretion</subject><subject>Sheep</subject><subject>Shigella</subject><subject>Structure-function relationships</subject><subject>Tertiary structure</subject><subject>translocon</subject><subject>type III secretion</subject><subject>Type III Secretion Systems</subject><subject>X-Ray Diffraction</subject><issn>0961-8368</issn><issn>1469-896X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kUtrFTEYhoMo9lgFf4EE3LiZmttkMhvBFi-FQkUtuAtp5ss5KXMmYy6Vs3Przt_oLzHT1noBVyHkycP7fS9Cjyk5oISw53MMB1wwdQetqJB9o3r56S5akV7SRnGp9tCDlC4IIYIyfh_tsV52rFdkhb6dJT-t8eBTLHP2l4D9lCBmHyYz4m3JZg0TJJ9wDtgPMGXvdjhvFg4nnwtOORabS4QfX7-7MtnlKx7NNCRrZsDBXdEfNn4N42hwjmZKY7Amh4hr7gxVdDybw4fonjNjgkc35z46e_3q49Hb5uT0zfHRy5PGCq5UIwCAGUGdYx033J0TblzHqWutbVtJmVG97TrrJKdWWkktl5Rw5wbuBAfg--jFtXcu51sYbB0pmlHP0W9N3OlgvP77ZfIbvQ6XWtKWCyKr4NmNIIbPBVLWW5_sMtwEoSTNCFN9y3qhKvr0H_QilFg3WylKqejajqjfQhtDShHcbRhK9NJvvQe99FvRJ3-GvwV_FVqB5hr44kfY_Vek370_vRL-BIr3tM8</recordid><startdate>201808</startdate><enddate>201808</enddate><creator>Barta, Michael L.</creator><creator>Tachiyama, Shoichi</creator><creator>Muthuramalingam, Meenakumari</creator><creator>Arizmendi, Olivia</creator><creator>Villanueva, Cecilia E.</creator><creator>Ramyar, Kasra X.</creator><creator>Geisbrecht, Brian V.</creator><creator>Lovell, Scott</creator><creator>Battaile, Kevin P.</creator><creator>Picking, Wendy L.</creator><creator>Picking, William D.</creator><general>Wiley Subscription Services, Inc</general><general>John Wiley and Sons Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7T5</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-5635-325X</orcidid></search><sort><creationdate>201808</creationdate><title>Using disruptive insertional mutagenesis to identify the in situ structure‐function landscape of the Shigella translocator protein IpaB</title><author>Barta, Michael L. ; Tachiyama, Shoichi ; Muthuramalingam, Meenakumari ; Arizmendi, Olivia ; Villanueva, Cecilia E. ; Ramyar, Kasra X. ; Geisbrecht, Brian V. ; Lovell, Scott ; Battaile, Kevin P. ; Picking, Wendy L. ; Picking, William D.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4388-4eee2a41ff273a3fb03af731f5cc55612a89c77cf631c6c61c36103ffd3f43ee3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Animals</topic><topic>Antigens, Bacterial - chemistry</topic><topic>Antigens, Bacterial - genetics</topic><topic>Antigens, Bacterial - metabolism</topic><topic>Antigens, Bacterial - physiology</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Bacterial Proteins - physiology</topic><topic>Cells, Cultured</topic><topic>Erythrocytes</topic><topic>Full‐Length Papers</topic><topic>Hemolysis</topic><topic>Insertion</topic><topic>Insertional mutagenesis</topic><topic>Invasiveness</topic><topic>IpaB</topic><topic>Lysozyme</topic><topic>Mammalian cells</topic><topic>Mutagenesis</topic><topic>Mutagenesis, Insertional - methods</topic><topic>Mutants</topic><topic>Perturbation</topic><topic>Pore formation</topic><topic>Protein structure</topic><topic>Proteins</topic><topic>Secretion</topic><topic>Sheep</topic><topic>Shigella</topic><topic>Structure-function relationships</topic><topic>Tertiary structure</topic><topic>translocon</topic><topic>type III secretion</topic><topic>Type III Secretion Systems</topic><topic>X-Ray Diffraction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Barta, Michael L.</creatorcontrib><creatorcontrib>Tachiyama, Shoichi</creatorcontrib><creatorcontrib>Muthuramalingam, Meenakumari</creatorcontrib><creatorcontrib>Arizmendi, Olivia</creatorcontrib><creatorcontrib>Villanueva, Cecilia E.</creatorcontrib><creatorcontrib>Ramyar, Kasra X.</creatorcontrib><creatorcontrib>Geisbrecht, Brian V.</creatorcontrib><creatorcontrib>Lovell, Scott</creatorcontrib><creatorcontrib>Battaile, Kevin P.</creatorcontrib><creatorcontrib>Picking, Wendy L.</creatorcontrib><creatorcontrib>Picking, William D.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Immunology Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Protein science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Barta, Michael L.</au><au>Tachiyama, Shoichi</au><au>Muthuramalingam, Meenakumari</au><au>Arizmendi, Olivia</au><au>Villanueva, Cecilia E.</au><au>Ramyar, Kasra X.</au><au>Geisbrecht, Brian V.</au><au>Lovell, Scott</au><au>Battaile, Kevin P.</au><au>Picking, Wendy L.</au><au>Picking, William D.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Using disruptive insertional mutagenesis to identify the in situ structure‐function landscape of the Shigella translocator protein IpaB</atitle><jtitle>Protein science</jtitle><addtitle>Protein Sci</addtitle><date>2018-08</date><risdate>2018</risdate><volume>27</volume><issue>8</issue><spage>1392</spage><epage>1406</epage><pages>1392-1406</pages><issn>0961-8368</issn><eissn>1469-896X</eissn><abstract>Bacterial type III secretion systems (T3SS) are used to inject proteins into mammalian cells to subvert cellular functions. The Shigella T3SS apparatus (T3SA) is comprised of a basal body, cytoplasmic sorting platform and exposed needle with needle “tip complex” (TC). TC maturation occurs when the translocator protein IpaB is recruited to the needle tip where both IpaD and IpaB control secretion induction. IpaB insertion into the host membrane is the first step of translocon pore formation and secretion induction. We employed disruptive insertional mutagenesis, using bacteriophage T4 lysozyme (T4L), within predicted IpaB loops to show how topological features affect TC functions (secretion control, translocon formation and effector secretion). Insertions within the N‐terminal half of IpaB were most likely to result in a loss of steady‐state secretion control, however, all but the two that were not recognized by the T3SA retained nearly wild‐type hemolysis (translocon formation) and invasiveness levels (effector secretion). In contrast, all but one insertion in the C‐terminal half of IpaB maintained secretion control but were impaired for hemolysis and invasion. These nature of the data suggest the latter mutants are defective in a post‐secretion event, most likely due to impaired interactions with the second translocator protein IpaC. Intriguingly, only two insertion mutants displayed readily detectable T4L on the bacterial surface. The data create a picture in which the makeup and structure of a functional T3SA TC is highly amenable to physical perturbation, indicating that the tertiary structure of IpaB within the TC is more plastic than previously realized.</abstract><cop>United States</cop><pub>Wiley Subscription Services, Inc</pub><pmid>29672980</pmid><doi>10.1002/pro.3428</doi><tpages>15</tpages><orcidid>https://orcid.org/0000-0001-5635-325X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Animals Antigens, Bacterial - chemistry Antigens, Bacterial - genetics Antigens, Bacterial - metabolism Antigens, Bacterial - physiology Bacterial Proteins - chemistry Bacterial Proteins - genetics Bacterial Proteins - metabolism Bacterial Proteins - physiology Cells, Cultured Erythrocytes Full‐Length Papers Hemolysis Insertion Insertional mutagenesis Invasiveness IpaB Lysozyme Mammalian cells Mutagenesis Mutagenesis, Insertional - methods Mutants Perturbation Pore formation Protein structure Proteins Secretion Sheep Shigella Structure-function relationships Tertiary structure translocon type III secretion Type III Secretion Systems X-Ray Diffraction |
title | Using disruptive insertional mutagenesis to identify the in situ structure‐function landscape of the Shigella translocator protein IpaB |
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