MIN1PIPE: A Miniscope 1-Photon-Based Calcium Imaging Signal Extraction Pipeline

In vivo calcium imaging using a 1-photon-based miniscope and a microendoscopic lens enables studies of neural activities in freely behaving animals. However, the high and fluctuating background, the inevitable movements and distortions of imaging field, and the extensive spatial overlaps of fluoresc...

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Veröffentlicht in:	Cell reports (Cambridge) 2018-06, Vol.23 (12), p.3673-3684
Hauptverfasser:	Lu, Jinghao, Li, Chunyuan, Singh-Alvarado, Jonnathan, Zhou, Zhe Charles, Fröhlich, Flavio, Mooney, Richard, Wang, Fan
Format:	Artikel
Sprache:	eng
Schlagworte:	Animals automatic signal extraction Calcium - metabolism calcium imaging Databases as Topic Finches - physiology Imaging, Three-Dimensional Mice miniscope movement correction Photons Reproducibility of Results Signal Processing, Computer-Assisted single-photon Software Vocalization, Animal
Online-Zugang:	Volltext
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