Genome-Wide Identification and Expression Profiling Analysis of the Xyloglucan Endotransglucosylase/Hydrolase Gene Family in Tobacco ( Nicotiana tabacum L.)
Xyloglucan endotransglucosylase/hydrolase genes ( ) encode enzymes required for the reconstruction and modification of xyloglucan backbones, which will result in changes of cell wall extensibility during growth. A total of 56 genes were identified from common tobacco, and 50 cDNA fragments were veri...
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Veröffentlicht in: | Genes 2018-05, Vol.9 (6), p.273 |
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Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | Xyloglucan endotransglucosylase/hydrolase genes (
) encode enzymes required for the reconstruction and modification of xyloglucan backbones, which will result in changes of cell wall extensibility during growth. A total of 56
genes were identified from common tobacco, and 50 cDNA fragments were verified by PCR amplification. The 56
genes could be classified into two subfamilies: Group I/II and Group III according to their phylogenetic relationships. The gene structure, chromosomal localization, conserved protein domains prediction, sub-cellular localization of NtXTH proteins and evolutionary relationships among
,
,
,
, and rice were also analyzed. The
expression profiles analyzed by the TobEA database and qRT-PCR revealed that
display different expression patterns in different tissues. Notably, the expression patterns of 12
responding to environment stresses, including salinity, alkali, heat, chilling, and plant hormones, including IAA and brassinolide, were characterized. All the results would be useful for the function study of
during different growth cycles and stresses. |
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ISSN: | 2073-4425 2073-4425 |
DOI: | 10.3390/genes9060273 |