Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov
An isolate, designated SPSPC-11 , with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2018-04, Vol.68 (4), p.982-989 |
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| container_title | International journal of systematic and evolutionary microbiology |
| container_volume | 68 |
| creator | Albuquerque, Luciana Polónia, Ana Rita M Barroso, Cristina Froufe, Hugo J C Lage, Olga Lobo-da-Cunha, Alexandre Egas, Conceição da Costa, Milton S |
| description | An isolate, designated SPSPC-11
, with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species of the genus Thermonema but with a pairwise sequence similarity of |
| doi_str_mv | 10.1099/ijsem.0.002556 |
| format | Article |
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, with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species of the genus Thermonema but with a pairwise sequence similarity of <85 %. The isolate was orange-pigmented, formed non-motile long filaments and rod-shaped cells that stain Gram-negative. The organism was strictly aerobic, oxidase-positive and catalase-positive. The major fatty acids were iso-C15:0, iso-C15 : 0 2-OH and iso-C17 : 0 3-OH. The major polar lipids were one aminophospholipid, two aminolipids and three unidentified lipids. Menaquinone 7 was the major respiratory quinone. The DNA G+C content of strain SPSPC-11
was 37.6 mol% (draft genome sequence). The high quality draft genome sequence corroborated many of the phenotypic characteristics of strain SPSPC-11
. Based on genotypic, phylogenetic, physiological and biochemical characterization we describe a new species of a novel genus represented by strain SPSPC-11
(=CECT 9012
=LMG 29233
) for which we propose the name Raineya orbicola gen. nov., sp. nov. We also describe the family Raineyaceae to accommodate this new genus and species.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.002556</identifier><identifier>PMID: 29458463</identifier><language>eng</language><publisher>England: Microbiology Society</publisher><subject>Bacterial Typing Techniques ; Bacteroidetes - classification ; Bacteroidetes - genetics ; Bacteroidetes - isolation & purification ; Base Composition ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Hot Springs - microbiology ; Phospholipids - chemistry ; Phylogeny ; Pigmentation ; Portugal ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Taxonomic Description ; Vitamin K 2 - analogs & derivatives ; Vitamin K 2 - chemistry</subject><ispartof>International journal of systematic and evolutionary microbiology, 2018-04, Vol.68 (4), p.982-989</ispartof><rights>2018 IUMS 2018</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c417t-4d716dbbbb22279d06f3f270780ba96f9220e525847ea9076c7c573cb25b9d673</citedby><cites>FETCH-LOGICAL-c417t-4d716dbbbb22279d06f3f270780ba96f9220e525847ea9076c7c573cb25b9d673</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,3746,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29458463$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Albuquerque, Luciana</creatorcontrib><creatorcontrib>Polónia, Ana Rita M</creatorcontrib><creatorcontrib>Barroso, Cristina</creatorcontrib><creatorcontrib>Froufe, Hugo J C</creatorcontrib><creatorcontrib>Lage, Olga</creatorcontrib><creatorcontrib>Lobo-da-Cunha, Alexandre</creatorcontrib><creatorcontrib>Egas, Conceição</creatorcontrib><creatorcontrib>da Costa, Milton S</creatorcontrib><title>Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>An isolate, designated SPSPC-11
, with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species of the genus Thermonema but with a pairwise sequence similarity of <85 %. The isolate was orange-pigmented, formed non-motile long filaments and rod-shaped cells that stain Gram-negative. The organism was strictly aerobic, oxidase-positive and catalase-positive. The major fatty acids were iso-C15:0, iso-C15 : 0 2-OH and iso-C17 : 0 3-OH. The major polar lipids were one aminophospholipid, two aminolipids and three unidentified lipids. Menaquinone 7 was the major respiratory quinone. The DNA G+C content of strain SPSPC-11
was 37.6 mol% (draft genome sequence). The high quality draft genome sequence corroborated many of the phenotypic characteristics of strain SPSPC-11
. Based on genotypic, phylogenetic, physiological and biochemical characterization we describe a new species of a novel genus represented by strain SPSPC-11
(=CECT 9012
=LMG 29233
) for which we propose the name Raineya orbicola gen. nov., sp. nov. We also describe the family Raineyaceae to accommodate this new genus and species.</description><subject>Bacterial Typing Techniques</subject><subject>Bacteroidetes - classification</subject><subject>Bacteroidetes - genetics</subject><subject>Bacteroidetes - isolation & purification</subject><subject>Base Composition</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Hot Springs - microbiology</subject><subject>Phospholipids - chemistry</subject><subject>Phylogeny</subject><subject>Pigmentation</subject><subject>Portugal</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Taxonomic Description</subject><subject>Vitamin K 2 - analogs & derivatives</subject><subject>Vitamin K 2 - chemistry</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVUV1LwzAUDaK4OX31UfIDbL1N22R5EXT4BQNB9DmkabpmtE1JukH_hL_ZrptD78v9OPeew-UgdB1BGAHnd2btdR1CCEDSlJ6gaZRQGqQQJ6fHmtAJuvB-DTAMAM7RhPAknSc0nqLvD2ka3UtsXWaUrSRe6SbEjd2Gt9i3-wpL7CuzKruqx12pXW3b0lRG4UyqTjuzqbEtdghuy74ausdxbk2uO-2xbPIRzLVXzrSdsc1u_6CstNS4kPUodYnOCll5fXXIM_T1_PS5eA2W7y9vi4dloJKIdUGSs4jm2RCEEMZzoEVcEAZsDpnktOCEgE7J8CPTkgOjiqmUxSojacZzyuIZut_ztpus1rnSTedkJVpnaul6YaUR_5HGlGJltyLlcxKRHUG4J1DOeu90cbyNQOycEaMzAsTemeHg5q_icf3XivgHzjqNpA</recordid><startdate>20180401</startdate><enddate>20180401</enddate><creator>Albuquerque, Luciana</creator><creator>Polónia, Ana Rita M</creator><creator>Barroso, Cristina</creator><creator>Froufe, Hugo J C</creator><creator>Lage, Olga</creator><creator>Lobo-da-Cunha, Alexandre</creator><creator>Egas, Conceição</creator><creator>da Costa, Milton S</creator><general>Microbiology Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope></search><sort><creationdate>20180401</creationdate><title>Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov</title><author>Albuquerque, Luciana ; Polónia, Ana Rita M ; Barroso, Cristina ; Froufe, Hugo J C ; Lage, Olga ; Lobo-da-Cunha, Alexandre ; Egas, Conceição ; da Costa, Milton S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c417t-4d716dbbbb22279d06f3f270780ba96f9220e525847ea9076c7c573cb25b9d673</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Bacterial Typing Techniques</topic><topic>Bacteroidetes - classification</topic><topic>Bacteroidetes - genetics</topic><topic>Bacteroidetes - isolation & purification</topic><topic>Base Composition</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Hot Springs - microbiology</topic><topic>Phospholipids - chemistry</topic><topic>Phylogeny</topic><topic>Pigmentation</topic><topic>Portugal</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Taxonomic Description</topic><topic>Vitamin K 2 - analogs & derivatives</topic><topic>Vitamin K 2 - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Albuquerque, Luciana</creatorcontrib><creatorcontrib>Polónia, Ana Rita M</creatorcontrib><creatorcontrib>Barroso, Cristina</creatorcontrib><creatorcontrib>Froufe, Hugo J C</creatorcontrib><creatorcontrib>Lage, Olga</creatorcontrib><creatorcontrib>Lobo-da-Cunha, Alexandre</creatorcontrib><creatorcontrib>Egas, Conceição</creatorcontrib><creatorcontrib>da Costa, Milton S</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Albuquerque, Luciana</au><au>Polónia, Ana Rita M</au><au>Barroso, Cristina</au><au>Froufe, Hugo J C</au><au>Lage, Olga</au><au>Lobo-da-Cunha, Alexandre</au><au>Egas, Conceição</au><au>da Costa, Milton S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2018-04-01</date><risdate>2018</risdate><volume>68</volume><issue>4</issue><spage>982</spage><epage>989</epage><pages>982-989</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>An isolate, designated SPSPC-11
, with an optimum growth temperature of about 50 °C and an optimum pH for growth between 7.5 and 8.0, was recovered from a hot spring in central Portugal. Based on phylogenetic analysis of its 16S rRNA sequence, the new organism is most closely related to the species of the genus Thermonema but with a pairwise sequence similarity of <85 %. The isolate was orange-pigmented, formed non-motile long filaments and rod-shaped cells that stain Gram-negative. The organism was strictly aerobic, oxidase-positive and catalase-positive. The major fatty acids were iso-C15:0, iso-C15 : 0 2-OH and iso-C17 : 0 3-OH. The major polar lipids were one aminophospholipid, two aminolipids and three unidentified lipids. Menaquinone 7 was the major respiratory quinone. The DNA G+C content of strain SPSPC-11
was 37.6 mol% (draft genome sequence). The high quality draft genome sequence corroborated many of the phenotypic characteristics of strain SPSPC-11
. Based on genotypic, phylogenetic, physiological and biochemical characterization we describe a new species of a novel genus represented by strain SPSPC-11
(=CECT 9012
=LMG 29233
) for which we propose the name Raineya orbicola gen. nov., sp. nov. We also describe the family Raineyaceae to accommodate this new genus and species.</abstract><cop>England</cop><pub>Microbiology Society</pub><pmid>29458463</pmid><doi>10.1099/ijsem.0.002556</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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| source | MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection |
| subjects | Bacterial Typing Techniques Bacteroidetes - classification Bacteroidetes - genetics Bacteroidetes - isolation & purification Base Composition DNA, Bacterial - genetics Fatty Acids - chemistry Hot Springs - microbiology Phospholipids - chemistry Phylogeny Pigmentation Portugal RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Taxonomic Description Vitamin K 2 - analogs & derivatives Vitamin K 2 - chemistry |
| title | Raineya orbicola gen. nov., sp. nov. a slightly thermophilic bacterium of the phylum Bacteroidetes and the description of Raineyaceae fam. nov |
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