History of genome editing in yeast

For thousands of years humans have used the budding yeast Saccharomyces cerevisiae for the production of bread and alcohol; however, in the last 30–40 years our understanding of the yeast biology has dramatically increased, enabling us to modify its genome. Although S. cerevisiae has been the main f...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Yeast (Chichester, England) England), 2018-05, Vol.35 (5), p.361-368
Hauptverfasser: Fraczek, Marcin G., Naseeb, Samina, Delneri, Daniela
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 368
container_issue 5
container_start_page 361
container_title Yeast (Chichester, England)
container_volume 35
creator Fraczek, Marcin G.
Naseeb, Samina
Delneri, Daniela
description For thousands of years humans have used the budding yeast Saccharomyces cerevisiae for the production of bread and alcohol; however, in the last 30–40 years our understanding of the yeast biology has dramatically increased, enabling us to modify its genome. Although S. cerevisiae has been the main focus of many research groups, other non‐conventional yeasts have also been studied and exploited for biotechnological purposes. Our experiments and knowledge have evolved from recombination to high‐throughput PCR‐based transformations to highly accurate CRISPR methods in order to alter yeast traits for either research or industrial purposes. Since the release of the genome sequence of S. cerevisiae in 1996, the precise and targeted genome editing has increased significantly. In this ‘Budding topic’ we discuss the significant developments of genome editing in yeast, mainly focusing on Cre‐loxP mediated recombination, delitto perfetto and CRISPR/Cas. In this Budding Topic article we discuss the significant developments of genome editing in various yeast species used for research and industrial purposes. The article mainly focuses on homologous and non‐homologous recombination, Cre‐loxP mediated recombination, delitto perfetto and CRISPR/Cas that have changed the world of bioengineering in yeast.
doi_str_mv 10.1002/yea.3308
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5969250</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1989599238</sourcerecordid><originalsourceid>FETCH-LOGICAL-c5378-2601e461a7dafcd35efcd71b67806c74a69b608ca420a09f7c28b650c0b12c853</originalsourceid><addsrcrecordid>eNqFkU1LAzEQhoMotlbBXyCLXrysTpLN10UopX5AwYuCnkI2zdbIdqObrdJ_b7RVVBAvM4d5eJiZF6F9DCcYgJwunTmhFOQG6mNQIgfgeBP1QRQqZ0DvemgnxkcAjBmR26hHFC2YKHgfHV762IV2mYUqm7kmzF3mpr7zzSzzTZa8sdtFW5Wpo9tb9wG6PR_fjC7zyfXF1Wg4yS2jQuaEA3YFx0ZMTWWnlLlUBS65kMCtKAxXJQdpTUHAgKqEJbLkDCyUmFjJ6ACdrbxPi3LuptY1XWtq_dT6uWmXOhivf04a_6Bn4UUzxRVJZw7Q8VrQhueFi52e-2hdXZvGhUXUBLggSioo_kVxwphShMqEHv1CH8OibdInkpAyQohQ34S2DTG2rvraG4N-z0inX-r3jBJ68P3OL_AzlATkK-DV1275p0jfj4cfwjed7JiQ</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2035222794</pqid></control><display><type>article</type><title>History of genome editing in yeast</title><source>MEDLINE</source><source>Wiley Online Library Journals Frontfile Complete</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Wiley Free Content</source><creator>Fraczek, Marcin G. ; Naseeb, Samina ; Delneri, Daniela</creator><creatorcontrib>Fraczek, Marcin G. ; Naseeb, Samina ; Delneri, Daniela</creatorcontrib><description>For thousands of years humans have used the budding yeast Saccharomyces cerevisiae for the production of bread and alcohol; however, in the last 30–40 years our understanding of the yeast biology has dramatically increased, enabling us to modify its genome. Although S. cerevisiae has been the main focus of many research groups, other non‐conventional yeasts have also been studied and exploited for biotechnological purposes. Our experiments and knowledge have evolved from recombination to high‐throughput PCR‐based transformations to highly accurate CRISPR methods in order to alter yeast traits for either research or industrial purposes. Since the release of the genome sequence of S. cerevisiae in 1996, the precise and targeted genome editing has increased significantly. In this ‘Budding topic’ we discuss the significant developments of genome editing in yeast, mainly focusing on Cre‐loxP mediated recombination, delitto perfetto and CRISPR/Cas. In this Budding Topic article we discuss the significant developments of genome editing in various yeast species used for research and industrial purposes. The article mainly focuses on homologous and non‐homologous recombination, Cre‐loxP mediated recombination, delitto perfetto and CRISPR/Cas that have changed the world of bioengineering in yeast.</description><identifier>ISSN: 0749-503X</identifier><identifier>ISSN: 1097-0061</identifier><identifier>EISSN: 1097-0061</identifier><identifier>DOI: 10.1002/yea.3308</identifier><identifier>PMID: 29345746</identifier><language>eng</language><publisher>England: Wiley Subscription Services, Inc</publisher><subject>Bread ; Budding Topic ; Budding Topics ; Cre‐loxP ; CRISPR ; CRISPR-Cas Systems ; CRISPR/Cas9 ; delitto perfetto ; Gene Editing ; genome ; Genome editing ; Genome, Fungal ; Genomes ; History, 20th Century ; History, 21st Century ; humans ; mycology ; Nucleotide sequence ; nucleotide sequences ; polymerase chain reaction ; Recombination ; Saccharomyces cerevisiae ; Saccharomyces cerevisiae - genetics ; Yeast ; yeasts</subject><ispartof>Yeast (Chichester, England), 2018-05, Vol.35 (5), p.361-368</ispartof><rights>2018 The Authors. published by John Wiley &amp; Sons, Ltd.</rights><rights>2018 The Authors. Yeast published by John Wiley &amp; Sons, Ltd.</rights><rights>Copyright © 2018 John Wiley &amp; Sons, Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5378-2601e461a7dafcd35efcd71b67806c74a69b608ca420a09f7c28b650c0b12c853</citedby><cites>FETCH-LOGICAL-c5378-2601e461a7dafcd35efcd71b67806c74a69b608ca420a09f7c28b650c0b12c853</cites><orcidid>0000-0001-5134-4709</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fyea.3308$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fyea.3308$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>230,314,778,782,883,1414,1430,27907,27908,45557,45558,46392,46816</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29345746$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Fraczek, Marcin G.</creatorcontrib><creatorcontrib>Naseeb, Samina</creatorcontrib><creatorcontrib>Delneri, Daniela</creatorcontrib><title>History of genome editing in yeast</title><title>Yeast (Chichester, England)</title><addtitle>Yeast</addtitle><description>For thousands of years humans have used the budding yeast Saccharomyces cerevisiae for the production of bread and alcohol; however, in the last 30–40 years our understanding of the yeast biology has dramatically increased, enabling us to modify its genome. Although S. cerevisiae has been the main focus of many research groups, other non‐conventional yeasts have also been studied and exploited for biotechnological purposes. Our experiments and knowledge have evolved from recombination to high‐throughput PCR‐based transformations to highly accurate CRISPR methods in order to alter yeast traits for either research or industrial purposes. Since the release of the genome sequence of S. cerevisiae in 1996, the precise and targeted genome editing has increased significantly. In this ‘Budding topic’ we discuss the significant developments of genome editing in yeast, mainly focusing on Cre‐loxP mediated recombination, delitto perfetto and CRISPR/Cas. In this Budding Topic article we discuss the significant developments of genome editing in various yeast species used for research and industrial purposes. The article mainly focuses on homologous and non‐homologous recombination, Cre‐loxP mediated recombination, delitto perfetto and CRISPR/Cas that have changed the world of bioengineering in yeast.</description><subject>Bread</subject><subject>Budding Topic</subject><subject>Budding Topics</subject><subject>Cre‐loxP</subject><subject>CRISPR</subject><subject>CRISPR-Cas Systems</subject><subject>CRISPR/Cas9</subject><subject>delitto perfetto</subject><subject>Gene Editing</subject><subject>genome</subject><subject>Genome editing</subject><subject>Genome, Fungal</subject><subject>Genomes</subject><subject>History, 20th Century</subject><subject>History, 21st Century</subject><subject>humans</subject><subject>mycology</subject><subject>Nucleotide sequence</subject><subject>nucleotide sequences</subject><subject>polymerase chain reaction</subject><subject>Recombination</subject><subject>Saccharomyces cerevisiae</subject><subject>Saccharomyces cerevisiae - genetics</subject><subject>Yeast</subject><subject>yeasts</subject><issn>0749-503X</issn><issn>1097-0061</issn><issn>1097-0061</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>EIF</sourceid><recordid>eNqFkU1LAzEQhoMotlbBXyCLXrysTpLN10UopX5AwYuCnkI2zdbIdqObrdJ_b7RVVBAvM4d5eJiZF6F9DCcYgJwunTmhFOQG6mNQIgfgeBP1QRQqZ0DvemgnxkcAjBmR26hHFC2YKHgfHV762IV2mYUqm7kmzF3mpr7zzSzzTZa8sdtFW5Wpo9tb9wG6PR_fjC7zyfXF1Wg4yS2jQuaEA3YFx0ZMTWWnlLlUBS65kMCtKAxXJQdpTUHAgKqEJbLkDCyUmFjJ6ACdrbxPi3LuptY1XWtq_dT6uWmXOhivf04a_6Bn4UUzxRVJZw7Q8VrQhueFi52e-2hdXZvGhUXUBLggSioo_kVxwphShMqEHv1CH8OibdInkpAyQohQ34S2DTG2rvraG4N-z0inX-r3jBJ68P3OL_AzlATkK-DV1275p0jfj4cfwjed7JiQ</recordid><startdate>201805</startdate><enddate>201805</enddate><creator>Fraczek, Marcin G.</creator><creator>Naseeb, Samina</creator><creator>Delneri, Daniela</creator><general>Wiley Subscription Services, Inc</general><general>John Wiley and Sons Inc</general><scope>24P</scope><scope>WIN</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QR</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-5134-4709</orcidid></search><sort><creationdate>201805</creationdate><title>History of genome editing in yeast</title><author>Fraczek, Marcin G. ; Naseeb, Samina ; Delneri, Daniela</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5378-2601e461a7dafcd35efcd71b67806c74a69b608ca420a09f7c28b650c0b12c853</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Bread</topic><topic>Budding Topic</topic><topic>Budding Topics</topic><topic>Cre‐loxP</topic><topic>CRISPR</topic><topic>CRISPR-Cas Systems</topic><topic>CRISPR/Cas9</topic><topic>delitto perfetto</topic><topic>Gene Editing</topic><topic>genome</topic><topic>Genome editing</topic><topic>Genome, Fungal</topic><topic>Genomes</topic><topic>History, 20th Century</topic><topic>History, 21st Century</topic><topic>humans</topic><topic>mycology</topic><topic>Nucleotide sequence</topic><topic>nucleotide sequences</topic><topic>polymerase chain reaction</topic><topic>Recombination</topic><topic>Saccharomyces cerevisiae</topic><topic>Saccharomyces cerevisiae - genetics</topic><topic>Yeast</topic><topic>yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fraczek, Marcin G.</creatorcontrib><creatorcontrib>Naseeb, Samina</creatorcontrib><creatorcontrib>Delneri, Daniela</creatorcontrib><collection>Wiley-Blackwell Open Access Titles</collection><collection>Wiley Free Content</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Chemoreception Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Yeast (Chichester, England)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fraczek, Marcin G.</au><au>Naseeb, Samina</au><au>Delneri, Daniela</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>History of genome editing in yeast</atitle><jtitle>Yeast (Chichester, England)</jtitle><addtitle>Yeast</addtitle><date>2018-05</date><risdate>2018</risdate><volume>35</volume><issue>5</issue><spage>361</spage><epage>368</epage><pages>361-368</pages><issn>0749-503X</issn><issn>1097-0061</issn><eissn>1097-0061</eissn><abstract>For thousands of years humans have used the budding yeast Saccharomyces cerevisiae for the production of bread and alcohol; however, in the last 30–40 years our understanding of the yeast biology has dramatically increased, enabling us to modify its genome. Although S. cerevisiae has been the main focus of many research groups, other non‐conventional yeasts have also been studied and exploited for biotechnological purposes. Our experiments and knowledge have evolved from recombination to high‐throughput PCR‐based transformations to highly accurate CRISPR methods in order to alter yeast traits for either research or industrial purposes. Since the release of the genome sequence of S. cerevisiae in 1996, the precise and targeted genome editing has increased significantly. In this ‘Budding topic’ we discuss the significant developments of genome editing in yeast, mainly focusing on Cre‐loxP mediated recombination, delitto perfetto and CRISPR/Cas. In this Budding Topic article we discuss the significant developments of genome editing in various yeast species used for research and industrial purposes. The article mainly focuses on homologous and non‐homologous recombination, Cre‐loxP mediated recombination, delitto perfetto and CRISPR/Cas that have changed the world of bioengineering in yeast.</abstract><cop>England</cop><pub>Wiley Subscription Services, Inc</pub><pmid>29345746</pmid><doi>10.1002/yea.3308</doi><tpages>8</tpages><orcidid>https://orcid.org/0000-0001-5134-4709</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0749-503X
ispartof Yeast (Chichester, England), 2018-05, Vol.35 (5), p.361-368
issn 0749-503X
1097-0061
1097-0061
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5969250
source MEDLINE; Wiley Online Library Journals Frontfile Complete; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Wiley Free Content
subjects Bread
Budding Topic
Budding Topics
Cre‐loxP
CRISPR
CRISPR-Cas Systems
CRISPR/Cas9
delitto perfetto
Gene Editing
genome
Genome editing
Genome, Fungal
Genomes
History, 20th Century
History, 21st Century
humans
mycology
Nucleotide sequence
nucleotide sequences
polymerase chain reaction
Recombination
Saccharomyces cerevisiae
Saccharomyces cerevisiae - genetics
Yeast
yeasts
title History of genome editing in yeast
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-16T06%3A32%3A31IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=History%20of%20genome%20editing%20in%20yeast&rft.jtitle=Yeast%20(Chichester,%20England)&rft.au=Fraczek,%20Marcin%20G.&rft.date=2018-05&rft.volume=35&rft.issue=5&rft.spage=361&rft.epage=368&rft.pages=361-368&rft.issn=0749-503X&rft.eissn=1097-0061&rft_id=info:doi/10.1002/yea.3308&rft_dat=%3Cproquest_pubme%3E1989599238%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2035222794&rft_id=info:pmid/29345746&rfr_iscdi=true