Lack of the Association of the PTPN22 C1858T Gene Polymorphism With Susceptibility to Familial Mediterranean Fever
This study aims to investigate whether the protein tyrosine phosphatase non-receptor type 22 (PTPN22) C1858T gene polymorphism plays a role in the pathogenesis of familial Mediterranean fever (FMF) through T-lymphocyte activation. We conducted a case-control study with 180 FMF patients (68 males, 11...
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Veröffentlicht in: | Archives of rheumatology 2016-06, Vol.31 (2), p.107-111 |
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creator | Küçükşahin, Orhan Şeker, Zeynep Şahin, Ali Kinikli, Gülay Tuncali, Timur Turgay, Murat Okoh, Alexis K Külahçioğlu, Emre Erten, Şükran Ateş, Aşkın |
description | This study aims to investigate whether the protein tyrosine phosphatase non-receptor type 22 (PTPN22) C1858T gene polymorphism plays a role in the pathogenesis of familial Mediterranean fever (FMF) through T-lymphocyte activation.
We conducted a case-control study with 180 FMF patients (68 males, 112 females; mean age 38.2±1.6 years; range 16 to 81 years) and 184 healthy controls (86 males, 98 females; mean age 32.9±9.2 years; range 18 to 58 years). The PTPN22 C1858T polymorphism (rs2476601) was genotyped by polymerase chain reaction restriction fragment length polymorphism. In patients with FMF, clinical features, disease severity score, the frequencies of amyloidosis, positive family history, and Mediterranean fever gene mutations were determined.
The frequencies of heterozygous genotype (CT) were 4.5% in FMF patients and 2.8% in healthy controls, respectively. The frequencies of polymorphic homozygous genotypes (TT) were 0.5% in both FMF patients and healthy controls. There were no statistically significant differences in the frequencies of CT and TT genotypes between FMF patients and healthy controls (odds ratio: 1.65, 95% confidence interval: 0.53-5.14, p>0.05 for CT genotype). The frequencies of clinical features, sex, amyloidosis, positive family history, Mediterranean fever gene mutations, and disease severity score were not significantly different between the patients.
The distribution of PTPN22 C1858T polymorphism did not reveal any association with FMF in a Turkish population. |
doi_str_mv | 10.5606/ArchRheumatol.2016.5788 |
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We conducted a case-control study with 180 FMF patients (68 males, 112 females; mean age 38.2±1.6 years; range 16 to 81 years) and 184 healthy controls (86 males, 98 females; mean age 32.9±9.2 years; range 18 to 58 years). The PTPN22 C1858T polymorphism (rs2476601) was genotyped by polymerase chain reaction restriction fragment length polymorphism. In patients with FMF, clinical features, disease severity score, the frequencies of amyloidosis, positive family history, and Mediterranean fever gene mutations were determined.
The frequencies of heterozygous genotype (CT) were 4.5% in FMF patients and 2.8% in healthy controls, respectively. The frequencies of polymorphic homozygous genotypes (TT) were 0.5% in both FMF patients and healthy controls. There were no statistically significant differences in the frequencies of CT and TT genotypes between FMF patients and healthy controls (odds ratio: 1.65, 95% confidence interval: 0.53-5.14, p>0.05 for CT genotype). The frequencies of clinical features, sex, amyloidosis, positive family history, Mediterranean fever gene mutations, and disease severity score were not significantly different between the patients.
The distribution of PTPN22 C1858T polymorphism did not reveal any association with FMF in a Turkish population.</description><identifier>ISSN: 2148-5046</identifier><identifier>ISSN: 1309-0291</identifier><identifier>EISSN: 1309-0283</identifier><identifier>DOI: 10.5606/ArchRheumatol.2016.5788</identifier><identifier>PMID: 29900952</identifier><language>eng</language><publisher>Turkey: Turkish League Against Rheumatism</publisher><subject>Amyloidosis ; Disease susceptibility ; Familial Mediterranean fever ; Gene mutations ; Genes ; Genetic aspects ; Genetic research ; Lymphocytes ; Phosphatases ; Single nucleotide polymorphisms ; Systemic lupus erythematosus ; Tyrosine</subject><ispartof>Archives of rheumatology, 2016-06, Vol.31 (2), p.107-111</ispartof><rights>COPYRIGHT 2016 Turkish League Against Rheumatism</rights><rights>Copyright Prof Sebnem Ataman, President Turkish League Against Rheumatism 2016</rights><rights>Copyright © 2016, Turkish League Against Rheumatism 2016 Turkish League Against Rheumatism</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c543t-aea7f182020d31d882e824c30ec199add25e439df9cc12e15e17f2665e168383</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5827824/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5827824/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27923,27924,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29900952$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Küçükşahin, Orhan</creatorcontrib><creatorcontrib>Şeker, Zeynep</creatorcontrib><creatorcontrib>Şahin, Ali</creatorcontrib><creatorcontrib>Kinikli, Gülay</creatorcontrib><creatorcontrib>Tuncali, Timur</creatorcontrib><creatorcontrib>Turgay, Murat</creatorcontrib><creatorcontrib>Okoh, Alexis K</creatorcontrib><creatorcontrib>Külahçioğlu, Emre</creatorcontrib><creatorcontrib>Erten, Şükran</creatorcontrib><creatorcontrib>Ateş, Aşkın</creatorcontrib><title>Lack of the Association of the PTPN22 C1858T Gene Polymorphism With Susceptibility to Familial Mediterranean Fever</title><title>Archives of rheumatology</title><addtitle>Arch Rheumatol</addtitle><description>This study aims to investigate whether the protein tyrosine phosphatase non-receptor type 22 (PTPN22) C1858T gene polymorphism plays a role in the pathogenesis of familial Mediterranean fever (FMF) through T-lymphocyte activation.
We conducted a case-control study with 180 FMF patients (68 males, 112 females; mean age 38.2±1.6 years; range 16 to 81 years) and 184 healthy controls (86 males, 98 females; mean age 32.9±9.2 years; range 18 to 58 years). The PTPN22 C1858T polymorphism (rs2476601) was genotyped by polymerase chain reaction restriction fragment length polymorphism. In patients with FMF, clinical features, disease severity score, the frequencies of amyloidosis, positive family history, and Mediterranean fever gene mutations were determined.
The frequencies of heterozygous genotype (CT) were 4.5% in FMF patients and 2.8% in healthy controls, respectively. The frequencies of polymorphic homozygous genotypes (TT) were 0.5% in both FMF patients and healthy controls. There were no statistically significant differences in the frequencies of CT and TT genotypes between FMF patients and healthy controls (odds ratio: 1.65, 95% confidence interval: 0.53-5.14, p>0.05 for CT genotype). The frequencies of clinical features, sex, amyloidosis, positive family history, Mediterranean fever gene mutations, and disease severity score were not significantly different between the patients.
The distribution of PTPN22 C1858T polymorphism did not reveal any association with FMF in a Turkish population.</description><subject>Amyloidosis</subject><subject>Disease susceptibility</subject><subject>Familial Mediterranean fever</subject><subject>Gene mutations</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetic research</subject><subject>Lymphocytes</subject><subject>Phosphatases</subject><subject>Single nucleotide polymorphisms</subject><subject>Systemic lupus erythematosus</subject><subject>Tyrosine</subject><issn>2148-5046</issn><issn>1309-0291</issn><issn>1309-0283</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><recordid>eNptUluL1DAULqK4w7p_QQOC-NIxlyZNX4RhcFZh1EUHfAzZ9HSbNW1mk3Rh_r0pe3FHJA8nnHwXzslXFG8IXnKBxYdVMP2PHqZBJ--WFBOx5LWUz4oFYbgpMZXsebGgpJIlx5U4Kc5ivMYYk6oWArOXxQltGowbThdF2GrzG_kOpR7QKkZvrE7Wjw-ti93FN0rRmkgud-gcxtzy7jD4sO9tHNAvm3r0c4oG9sleWmfTASWPNnrId-3QV2htghD0CHpEG7iF8Kp40WkX4ey-nha7zafd-nO5_X7-Zb3aloZXLJUadN0RSTHFLSOtlBQkrQzDYEjT6LalHCrWtF1jDKFAOJC6o0LkKiST7LT4eCe7ny4HaA2MKWin9sEOOhyU11Ydv4y2V1f-VnFJ6-yUBd7fCwR_M0FMarB5TufyLH6KimLOBRGM1hn69h_otZ_CmKdTpG5EVdcE47-oK-1A2bHz2dfMompVcZF9G0EzavkfVD4tDNb4ETqb-0eEd08IPWiX-ujdNH9jPAbWd0ATfIwBusdlEKzmZKmjZKk5WWpOVma-frrLR95Djtgf-PrK_A</recordid><startdate>201606</startdate><enddate>201606</enddate><creator>Küçükşahin, Orhan</creator><creator>Şeker, Zeynep</creator><creator>Şahin, Ali</creator><creator>Kinikli, Gülay</creator><creator>Tuncali, Timur</creator><creator>Turgay, Murat</creator><creator>Okoh, Alexis K</creator><creator>Külahçioğlu, Emre</creator><creator>Erten, Şükran</creator><creator>Ateş, Aşkın</creator><general>Turkish League Against Rheumatism</general><general>Prof Sebnem Ataman, President Turkish League Against Rheumatism</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>EDSIH</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201606</creationdate><title>Lack of the Association of the PTPN22 C1858T Gene Polymorphism With Susceptibility to Familial Mediterranean Fever</title><author>Küçükşahin, Orhan ; Şeker, Zeynep ; Şahin, Ali ; Kinikli, Gülay ; Tuncali, Timur ; Turgay, Murat ; Okoh, Alexis K ; Külahçioğlu, Emre ; Erten, Şükran ; Ateş, Aşkın</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c543t-aea7f182020d31d882e824c30ec199add25e439df9cc12e15e17f2665e168383</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Amyloidosis</topic><topic>Disease susceptibility</topic><topic>Familial Mediterranean fever</topic><topic>Gene mutations</topic><topic>Genes</topic><topic>Genetic aspects</topic><topic>Genetic research</topic><topic>Lymphocytes</topic><topic>Phosphatases</topic><topic>Single nucleotide polymorphisms</topic><topic>Systemic lupus erythematosus</topic><topic>Tyrosine</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Küçükşahin, Orhan</creatorcontrib><creatorcontrib>Şeker, Zeynep</creatorcontrib><creatorcontrib>Şahin, Ali</creatorcontrib><creatorcontrib>Kinikli, Gülay</creatorcontrib><creatorcontrib>Tuncali, Timur</creatorcontrib><creatorcontrib>Turgay, Murat</creatorcontrib><creatorcontrib>Okoh, Alexis K</creatorcontrib><creatorcontrib>Külahçioğlu, Emre</creatorcontrib><creatorcontrib>Erten, Şükran</creatorcontrib><creatorcontrib>Ateş, Aşkın</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>Turkey Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Archives of rheumatology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Küçükşahin, Orhan</au><au>Şeker, Zeynep</au><au>Şahin, Ali</au><au>Kinikli, Gülay</au><au>Tuncali, Timur</au><au>Turgay, Murat</au><au>Okoh, Alexis K</au><au>Külahçioğlu, Emre</au><au>Erten, Şükran</au><au>Ateş, Aşkın</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Lack of the Association of the PTPN22 C1858T Gene Polymorphism With Susceptibility to Familial Mediterranean Fever</atitle><jtitle>Archives of rheumatology</jtitle><addtitle>Arch Rheumatol</addtitle><date>2016-06</date><risdate>2016</risdate><volume>31</volume><issue>2</issue><spage>107</spage><epage>111</epage><pages>107-111</pages><issn>2148-5046</issn><issn>1309-0291</issn><eissn>1309-0283</eissn><abstract>This study aims to investigate whether the protein tyrosine phosphatase non-receptor type 22 (PTPN22) C1858T gene polymorphism plays a role in the pathogenesis of familial Mediterranean fever (FMF) through T-lymphocyte activation.
We conducted a case-control study with 180 FMF patients (68 males, 112 females; mean age 38.2±1.6 years; range 16 to 81 years) and 184 healthy controls (86 males, 98 females; mean age 32.9±9.2 years; range 18 to 58 years). The PTPN22 C1858T polymorphism (rs2476601) was genotyped by polymerase chain reaction restriction fragment length polymorphism. In patients with FMF, clinical features, disease severity score, the frequencies of amyloidosis, positive family history, and Mediterranean fever gene mutations were determined.
The frequencies of heterozygous genotype (CT) were 4.5% in FMF patients and 2.8% in healthy controls, respectively. The frequencies of polymorphic homozygous genotypes (TT) were 0.5% in both FMF patients and healthy controls. There were no statistically significant differences in the frequencies of CT and TT genotypes between FMF patients and healthy controls (odds ratio: 1.65, 95% confidence interval: 0.53-5.14, p>0.05 for CT genotype). The frequencies of clinical features, sex, amyloidosis, positive family history, Mediterranean fever gene mutations, and disease severity score were not significantly different between the patients.
The distribution of PTPN22 C1858T polymorphism did not reveal any association with FMF in a Turkish population.</abstract><cop>Turkey</cop><pub>Turkish League Against Rheumatism</pub><pmid>29900952</pmid><doi>10.5606/ArchRheumatol.2016.5788</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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source | Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Alma/SFX Local Collection |
subjects | Amyloidosis Disease susceptibility Familial Mediterranean fever Gene mutations Genes Genetic aspects Genetic research Lymphocytes Phosphatases Single nucleotide polymorphisms Systemic lupus erythematosus Tyrosine |
title | Lack of the Association of the PTPN22 C1858T Gene Polymorphism With Susceptibility to Familial Mediterranean Fever |
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