Dynamic contrast-enhanced magnetic resonance imaging for head and neck cancers
Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) has been correlated with prognosis in head and neck squamous cell carcinoma as well as with changes in normal tissues. These studies implement different software, either commercial or in-house, and different scan protocols. Thus, the gen...
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| Veröffentlicht in: | Scientific data 2018-02, Vol.5 (1), p.180008-180008, Article 180008 |
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| creator | Elhalawani, Hesham Ger, Rachel B. Mohamed, Abdallah S. R. Awan, Musaddiq J. Ding, Yao Li, Kimberly Fave, Xenia J. Beers, Andrew L. Driscoll, Brandon Hormuth II, David A. van Houdt, Petra J. He, Renjie Zhou, Shouhao Mathieu, Kelsey B. Li, Heng Coolens, Catherine Chung, Caroline Bankson, James A. Huang, Wei Wang, Jihong Sandulache, Vlad C. Lai, Stephen Y. Howell, Rebecca M. Stafford, R Jason Yankeelov, Thomas E. van der Heide, Uulke A. Frank, Steven J. Barboriak, Daniel P. Hazle, John D. Court, Laurence E. Kalpathy-Cramer, Jayashree Fuller, Clifton D. |
| description | Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) has been correlated with prognosis in head and neck squamous cell carcinoma as well as with changes in normal tissues. These studies implement different software, either commercial or in-house, and different scan protocols. Thus, the generalizability of the results is not confirmed. To assist in the standardization of quantitative metrics to confirm the generalizability of these previous studies, this data descriptor delineates in detail the DCE-MRI digital imaging and communications in medicine (DICOM) files with DICOM radiation therapy (RT) structure sets and digital reference objects (DROs), as well as, relevant clinical data that encompass a data set that can be used by all software for comparing quantitative metrics. Variable flip angle (VFA) with six flip angles and DCE-MRI scans with a temporal resolution of 5.5 s were acquired in the axial direction on a 3T MR scanner with a field of view of 25.6 cm, slice thickness of 4 mm, and 256×256 matrix size.
Design Type(s)
observation design
Measurement Type(s)
Dynamic Contrast-Enhanced Magnetic Resonance Imaging
Technology Type(s)
MRI Scanner
Factor Type(s)
ethnic group • Smoking Status • Tumor Identifier Location • antineoplastic agent
Sample Characteristic(s)
Homo sapiens • craniocervical region
Machine-accessible metadata file describing the reported data
(ISA-Tab format) |
| doi_str_mv | 10.1038/sdata.2018.8 |
| format | Article |
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Design Type(s)
observation design
Measurement Type(s)
Dynamic Contrast-Enhanced Magnetic Resonance Imaging
Technology Type(s)
MRI Scanner
Factor Type(s)
ethnic group • Smoking Status • Tumor Identifier Location • antineoplastic agent
Sample Characteristic(s)
Homo sapiens • craniocervical region
Machine-accessible metadata file describing the reported data
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R.</creatorcontrib><creatorcontrib>Awan, Musaddiq J.</creatorcontrib><creatorcontrib>Ding, Yao</creatorcontrib><creatorcontrib>Li, Kimberly</creatorcontrib><creatorcontrib>Fave, Xenia J.</creatorcontrib><creatorcontrib>Beers, Andrew L.</creatorcontrib><creatorcontrib>Driscoll, Brandon</creatorcontrib><creatorcontrib>Hormuth II, David A.</creatorcontrib><creatorcontrib>van Houdt, Petra J.</creatorcontrib><creatorcontrib>He, Renjie</creatorcontrib><creatorcontrib>Zhou, Shouhao</creatorcontrib><creatorcontrib>Mathieu, Kelsey B.</creatorcontrib><creatorcontrib>Li, Heng</creatorcontrib><creatorcontrib>Coolens, Catherine</creatorcontrib><creatorcontrib>Chung, Caroline</creatorcontrib><creatorcontrib>Bankson, James A.</creatorcontrib><creatorcontrib>Huang, Wei</creatorcontrib><creatorcontrib>Wang, Jihong</creatorcontrib><creatorcontrib>Sandulache, Vlad C.</creatorcontrib><creatorcontrib>Lai, Stephen Y.</creatorcontrib><creatorcontrib>Howell, Rebecca M.</creatorcontrib><creatorcontrib>Stafford, R Jason</creatorcontrib><creatorcontrib>Yankeelov, Thomas E.</creatorcontrib><creatorcontrib>van der Heide, Uulke A.</creatorcontrib><creatorcontrib>Frank, Steven J.</creatorcontrib><creatorcontrib>Barboriak, Daniel P.</creatorcontrib><creatorcontrib>Hazle, John D.</creatorcontrib><creatorcontrib>Court, Laurence E.</creatorcontrib><creatorcontrib>Kalpathy-Cramer, Jayashree</creatorcontrib><creatorcontrib>Fuller, Clifton D.</creatorcontrib><creatorcontrib>Joint Head and Neck Radiotherapy-MRI Development Cooperative</creatorcontrib><title>Dynamic contrast-enhanced magnetic resonance imaging for head and neck cancers</title><title>Scientific data</title><addtitle>Sci Data</addtitle><addtitle>Sci Data</addtitle><description>Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) has been correlated with prognosis in head and neck squamous cell carcinoma as well as with changes in normal tissues. These studies implement different software, either commercial or in-house, and different scan protocols. Thus, the generalizability of the results is not confirmed. To assist in the standardization of quantitative metrics to confirm the generalizability of these previous studies, this data descriptor delineates in detail the DCE-MRI digital imaging and communications in medicine (DICOM) files with DICOM radiation therapy (RT) structure sets and digital reference objects (DROs), as well as, relevant clinical data that encompass a data set that can be used by all software for comparing quantitative metrics. Variable flip angle (VFA) with six flip angles and DCE-MRI scans with a temporal resolution of 5.5 s were acquired in the axial direction on a 3T MR scanner with a field of view of 25.6 cm, slice thickness of 4 mm, and 256×256 matrix size.
Design Type(s)
observation design
Measurement Type(s)
Dynamic Contrast-Enhanced Magnetic Resonance Imaging
Technology Type(s)
MRI Scanner
Factor Type(s)
ethnic group • Smoking Status • Tumor Identifier Location • antineoplastic agent
Sample Characteristic(s)
Homo sapiens • craniocervical region
Machine-accessible metadata file describing the reported data
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R. ; Awan, Musaddiq J. ; Ding, Yao ; Li, Kimberly ; Fave, Xenia J. ; Beers, Andrew L. ; Driscoll, Brandon ; Hormuth II, David A. ; van Houdt, Petra J. ; He, Renjie ; Zhou, Shouhao ; Mathieu, Kelsey B. ; Li, Heng ; Coolens, Catherine ; Chung, Caroline ; Bankson, James A. ; Huang, Wei ; Wang, Jihong ; Sandulache, Vlad C. ; Lai, Stephen Y. ; Howell, Rebecca M. ; Stafford, R Jason ; Yankeelov, Thomas E. ; van der Heide, Uulke A. ; Frank, Steven J. ; Barboriak, Daniel P. ; Hazle, John D. ; Court, Laurence E. ; Kalpathy-Cramer, Jayashree ; Fuller, Clifton D.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c450t-dbf12a3539fde7f257b39b7644148399bc4748a0b158dcff5cdc4c314f45c0373</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>631/67/2321</topic><topic>692/308/53/2423</topic><topic>692/699/67/1536/1665</topic><topic>Carcinoma, Squamous Cell - diagnostic imaging</topic><topic>Carcinoma, Squamous Cell - physiopathology</topic><topic>Carcinoma, Squamous Cell - radiotherapy</topic><topic>Computer programs</topic><topic>Data Descriptor</topic><topic>Head & neck cancer</topic><topic>Head and Neck Neoplasms - diagnostic imaging</topic><topic>Head and Neck Neoplasms - physiopathology</topic><topic>Head and Neck Neoplasms - radiotherapy</topic><topic>Humanities and Social Sciences</topic><topic>Humans</topic><topic>Magnetic resonance imaging</topic><topic>Magnetic Resonance Imaging - methods</topic><topic>multidisciplinary</topic><topic>NMR</topic><topic>Nuclear magnetic resonance</topic><topic>Radiation therapy</topic><topic>Science</topic><topic>Software</topic><topic>Squamous cell carcinoma</topic><topic>Standardization</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Elhalawani, Hesham</creatorcontrib><creatorcontrib>Ger, Rachel B.</creatorcontrib><creatorcontrib>Mohamed, Abdallah S. 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R.</au><au>Awan, Musaddiq J.</au><au>Ding, Yao</au><au>Li, Kimberly</au><au>Fave, Xenia J.</au><au>Beers, Andrew L.</au><au>Driscoll, Brandon</au><au>Hormuth II, David A.</au><au>van Houdt, Petra J.</au><au>He, Renjie</au><au>Zhou, Shouhao</au><au>Mathieu, Kelsey B.</au><au>Li, Heng</au><au>Coolens, Catherine</au><au>Chung, Caroline</au><au>Bankson, James A.</au><au>Huang, Wei</au><au>Wang, Jihong</au><au>Sandulache, Vlad C.</au><au>Lai, Stephen Y.</au><au>Howell, Rebecca M.</au><au>Stafford, R Jason</au><au>Yankeelov, Thomas E.</au><au>van der Heide, Uulke A.</au><au>Frank, Steven J.</au><au>Barboriak, Daniel P.</au><au>Hazle, John D.</au><au>Court, Laurence E.</au><au>Kalpathy-Cramer, Jayashree</au><au>Fuller, Clifton D.</au><aucorp>Joint Head and Neck Radiotherapy-MRI Development Cooperative</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Dynamic contrast-enhanced magnetic resonance imaging for head and neck cancers</atitle><jtitle>Scientific data</jtitle><stitle>Sci Data</stitle><addtitle>Sci Data</addtitle><date>2018-02-13</date><risdate>2018</risdate><volume>5</volume><issue>1</issue><spage>180008</spage><epage>180008</epage><pages>180008-180008</pages><artnum>180008</artnum><issn>2052-4463</issn><eissn>2052-4463</eissn><abstract>Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) has been correlated with prognosis in head and neck squamous cell carcinoma as well as with changes in normal tissues. These studies implement different software, either commercial or in-house, and different scan protocols. Thus, the generalizability of the results is not confirmed. To assist in the standardization of quantitative metrics to confirm the generalizability of these previous studies, this data descriptor delineates in detail the DCE-MRI digital imaging and communications in medicine (DICOM) files with DICOM radiation therapy (RT) structure sets and digital reference objects (DROs), as well as, relevant clinical data that encompass a data set that can be used by all software for comparing quantitative metrics. Variable flip angle (VFA) with six flip angles and DCE-MRI scans with a temporal resolution of 5.5 s were acquired in the axial direction on a 3T MR scanner with a field of view of 25.6 cm, slice thickness of 4 mm, and 256×256 matrix size.
Design Type(s)
observation design
Measurement Type(s)
Dynamic Contrast-Enhanced Magnetic Resonance Imaging
Technology Type(s)
MRI Scanner
Factor Type(s)
ethnic group • Smoking Status • Tumor Identifier Location • antineoplastic agent
Sample Characteristic(s)
Homo sapiens • craniocervical region
Machine-accessible metadata file describing the reported data
(ISA-Tab format)</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>29437167</pmid><doi>10.1038/sdata.2018.8</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-1063-7932</orcidid><orcidid>https://orcid.org/0000-0003-0150-0843</orcidid><orcidid>https://orcid.org/0000-0003-1244-7160</orcidid><orcidid>https://orcid.org/0000-0003-0073-7443</orcidid><orcidid>https://orcid.org/0000-0003-2064-7613</orcidid><orcidid>https://orcid.org/0000-0002-8574-154X</orcidid><orcidid>https://orcid.org/0000-0001-8906-9618</orcidid><orcidid>https://orcid.org/0000-0002-8124-5047</orcidid><orcidid>https://orcid.org/0000-0002-5264-3994</orcidid><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 2052-4463 |
| ispartof | Scientific data, 2018-02, Vol.5 (1), p.180008-180008, Article 180008 |
| issn | 2052-4463 2052-4463 |
| language | eng |
| recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5810424 |
| source | MEDLINE; Nature Free; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central; PubMed Central Open Access; Springer Nature OA Free Journals |
| subjects | 631/67/2321 692/308/53/2423 692/699/67/1536/1665 Carcinoma, Squamous Cell - diagnostic imaging Carcinoma, Squamous Cell - physiopathology Carcinoma, Squamous Cell - radiotherapy Computer programs Data Descriptor Head & neck cancer Head and Neck Neoplasms - diagnostic imaging Head and Neck Neoplasms - physiopathology Head and Neck Neoplasms - radiotherapy Humanities and Social Sciences Humans Magnetic resonance imaging Magnetic Resonance Imaging - methods multidisciplinary NMR Nuclear magnetic resonance Radiation therapy Science Software Squamous cell carcinoma Standardization |
| title | Dynamic contrast-enhanced magnetic resonance imaging for head and neck cancers |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-08T00%3A03%3A49IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Dynamic%20contrast-enhanced%20magnetic%20resonance%20imaging%20for%20head%20and%20neck%20cancers&rft.jtitle=Scientific%20data&rft.au=Elhalawani,%20Hesham&rft.aucorp=Joint%20Head%20and%20Neck%20Radiotherapy-MRI%20Development%20Cooperative&rft.date=2018-02-13&rft.volume=5&rft.issue=1&rft.spage=180008&rft.epage=180008&rft.pages=180008-180008&rft.artnum=180008&rft.issn=2052-4463&rft.eissn=2052-4463&rft_id=info:doi/10.1038/sdata.2018.8&rft_dat=%3Cproquest_pubme%3E2001915836%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2001388951&rft_id=info:pmid/29437167&rfr_iscdi=true |