Relative contributions of neutral and non-neutral processes to clinal variation in calyx lobe length in the series Sakawanum (Asarum: Aristolochiaceae)
Clines, the gradual variation in measurable traits along a geographical axis, play a major role in evolution and can contribute to our understanding of the relative roles of selective and neutral process in trait variation. Using genetic and morphological analyses, the relative contributions of neut...
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Veröffentlicht in: | Annals of botany 2018-01, Vol.121 (1), p.37-46 |
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creator | Takahashi, Daiki Teramine, Tsutomu Sakaguchi, Shota Setoguchi, Hiroaki |
description | Clines, the gradual variation in measurable traits along a geographical axis, play a major role in evolution and can contribute to our understanding of the relative roles of selective and neutral process in trait variation. Using genetic and morphological analyses, the relative contributions of neutral and non-neutral processes were explored to infer the evolutionary history of species of the series Sakawanum (genus Asarum), which shows significant clinal variation in calyx lobe length.
A total of 27 populations covering the natural geographical distribution of the series Sakawanum were sampled. Six nuclear microsatellite markers were used to investigate genetic structure and genetic diversity. The lengths of calyx lobes of multiple populations were measured to quantify their geographical and taxonomic differentiation. To detect the potential impact of selective pressure, morphological differentiation was compared with genetic differentiation (QCT-FST comparison).
Average calyx lobe length of A. minamitanianum was 124.11 mm, while that of A. costatum was 13.80 mm. Though gradually changing along the geographical axis within series, calyx lobe lengths were significantly differentiated among the taxa. Genetic differentiation between taxa was low (FST = 0.099), but a significant geographical structure along the morphological cline was detected. Except for one taxon pair, pairwise QCT values were significantly higher than the neutral genetic measures of FST and G'ST.
Divergent selection may have driven the calyx lobe length variation in series Sakawanum taxa, although the underlying mechanism is still not clear. The low genetic differentiation indicates recent divergence and/or gene flows between geographically close taxa. These neutral processes would also affect the clinal variation in calyx lobe lengths. Overall, this study implies the roles of population history and divergent selection in shaping the current cline of a flower trait in the series Sakawanum. |
doi_str_mv | 10.1093/aob/mcx122 |
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A total of 27 populations covering the natural geographical distribution of the series Sakawanum were sampled. Six nuclear microsatellite markers were used to investigate genetic structure and genetic diversity. The lengths of calyx lobes of multiple populations were measured to quantify their geographical and taxonomic differentiation. To detect the potential impact of selective pressure, morphological differentiation was compared with genetic differentiation (QCT-FST comparison).
Average calyx lobe length of A. minamitanianum was 124.11 mm, while that of A. costatum was 13.80 mm. Though gradually changing along the geographical axis within series, calyx lobe lengths were significantly differentiated among the taxa. Genetic differentiation between taxa was low (FST = 0.099), but a significant geographical structure along the morphological cline was detected. Except for one taxon pair, pairwise QCT values were significantly higher than the neutral genetic measures of FST and G'ST.
Divergent selection may have driven the calyx lobe length variation in series Sakawanum taxa, although the underlying mechanism is still not clear. The low genetic differentiation indicates recent divergence and/or gene flows between geographically close taxa. These neutral processes would also affect the clinal variation in calyx lobe lengths. Overall, this study implies the roles of population history and divergent selection in shaping the current cline of a flower trait in the series Sakawanum.</description><identifier>ISSN: 0305-7364</identifier><identifier>EISSN: 1095-8290</identifier><identifier>DOI: 10.1093/aob/mcx122</identifier><identifier>PMID: 29186343</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Aristolochiaceae - anatomy & histology ; Aristolochiaceae - genetics ; Flowers - anatomy & histology ; Flowers - genetics ; Genetic Variation ; Geography ; Microsatellite Repeats - genetics ; Original ; Phylogeny ; Phylogeography</subject><ispartof>Annals of botany, 2018-01, Vol.121 (1), p.37-46</ispartof><rights>The Author(s) 2017. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.</rights><rights>The Author(s) 2017. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c444t-8836808e413e4ae1fba375d967ca3c0abf4790a3e848cb088cc2cb6615e080dc3</citedby><cites>FETCH-LOGICAL-c444t-8836808e413e4ae1fba375d967ca3c0abf4790a3e848cb088cc2cb6615e080dc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5786219/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5786219/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,315,728,781,785,886,27929,27930,53796,53798</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29186343$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Takahashi, Daiki</creatorcontrib><creatorcontrib>Teramine, Tsutomu</creatorcontrib><creatorcontrib>Sakaguchi, Shota</creatorcontrib><creatorcontrib>Setoguchi, Hiroaki</creatorcontrib><title>Relative contributions of neutral and non-neutral processes to clinal variation in calyx lobe length in the series Sakawanum (Asarum: Aristolochiaceae)</title><title>Annals of botany</title><addtitle>Ann Bot</addtitle><description>Clines, the gradual variation in measurable traits along a geographical axis, play a major role in evolution and can contribute to our understanding of the relative roles of selective and neutral process in trait variation. Using genetic and morphological analyses, the relative contributions of neutral and non-neutral processes were explored to infer the evolutionary history of species of the series Sakawanum (genus Asarum), which shows significant clinal variation in calyx lobe length.
A total of 27 populations covering the natural geographical distribution of the series Sakawanum were sampled. Six nuclear microsatellite markers were used to investigate genetic structure and genetic diversity. The lengths of calyx lobes of multiple populations were measured to quantify their geographical and taxonomic differentiation. To detect the potential impact of selective pressure, morphological differentiation was compared with genetic differentiation (QCT-FST comparison).
Average calyx lobe length of A. minamitanianum was 124.11 mm, while that of A. costatum was 13.80 mm. Though gradually changing along the geographical axis within series, calyx lobe lengths were significantly differentiated among the taxa. Genetic differentiation between taxa was low (FST = 0.099), but a significant geographical structure along the morphological cline was detected. Except for one taxon pair, pairwise QCT values were significantly higher than the neutral genetic measures of FST and G'ST.
Divergent selection may have driven the calyx lobe length variation in series Sakawanum taxa, although the underlying mechanism is still not clear. The low genetic differentiation indicates recent divergence and/or gene flows between geographically close taxa. These neutral processes would also affect the clinal variation in calyx lobe lengths. Overall, this study implies the roles of population history and divergent selection in shaping the current cline of a flower trait in the series Sakawanum.</description><subject>Aristolochiaceae - anatomy & histology</subject><subject>Aristolochiaceae - genetics</subject><subject>Flowers - anatomy & histology</subject><subject>Flowers - genetics</subject><subject>Genetic Variation</subject><subject>Geography</subject><subject>Microsatellite Repeats - genetics</subject><subject>Original</subject><subject>Phylogeny</subject><subject>Phylogeography</subject><issn>0305-7364</issn><issn>1095-8290</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVUctuFDEQtBCILIELH4B8DEhD7LHHY3NAWkW8pEhIPM5Wj7cna_DYi-1Zki_hd5nVJhGcWl1dVd2tIuQ5Z685M-Ic0nA-uWvetg_IakG6RreGPSQrJljX9ELJE_KklB-MsVYZ_pictIZrJaRYkT9fMED1e6QuxZr9MFefYqFppBHnmiFQiBsaU2zu-l1ODkvBQmuiLvi4YHvIHg5K6iN1EG6uaUgD0oDxqm4PYN0iLZj9IvsKP-E3xHmiZ-sCeZ7e0HX2paaQ3NaDQ8CXT8mjEULBZ7f1lHx__-7bxcfm8vOHTxfry8ZJKWujtVCaaZRcoATk4wCi7zZG9Q6EYzCMsjcMBGqp3cC0dq51g1K8Q6bZxolT8vbou5uHCTcO4-FHu8t-gnxjE3j7_yT6rb1Ke9v1WrXcLAZntwY5_ZqxVDv54jAEiJjmYrnpmRJG9_1CfXWkupxKyTjer-HMHpK0S5L2mORCfvHvYffUu-jEX18Nn2Y</recordid><startdate>20180125</startdate><enddate>20180125</enddate><creator>Takahashi, Daiki</creator><creator>Teramine, Tsutomu</creator><creator>Sakaguchi, Shota</creator><creator>Setoguchi, Hiroaki</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20180125</creationdate><title>Relative contributions of neutral and non-neutral processes to clinal variation in calyx lobe length in the series Sakawanum (Asarum: Aristolochiaceae)</title><author>Takahashi, Daiki ; Teramine, Tsutomu ; Sakaguchi, Shota ; Setoguchi, Hiroaki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c444t-8836808e413e4ae1fba375d967ca3c0abf4790a3e848cb088cc2cb6615e080dc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Aristolochiaceae - anatomy & histology</topic><topic>Aristolochiaceae - genetics</topic><topic>Flowers - anatomy & histology</topic><topic>Flowers - genetics</topic><topic>Genetic Variation</topic><topic>Geography</topic><topic>Microsatellite Repeats - genetics</topic><topic>Original</topic><topic>Phylogeny</topic><topic>Phylogeography</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Takahashi, Daiki</creatorcontrib><creatorcontrib>Teramine, Tsutomu</creatorcontrib><creatorcontrib>Sakaguchi, Shota</creatorcontrib><creatorcontrib>Setoguchi, Hiroaki</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Annals of botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Takahashi, Daiki</au><au>Teramine, Tsutomu</au><au>Sakaguchi, Shota</au><au>Setoguchi, Hiroaki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Relative contributions of neutral and non-neutral processes to clinal variation in calyx lobe length in the series Sakawanum (Asarum: Aristolochiaceae)</atitle><jtitle>Annals of botany</jtitle><addtitle>Ann Bot</addtitle><date>2018-01-25</date><risdate>2018</risdate><volume>121</volume><issue>1</issue><spage>37</spage><epage>46</epage><pages>37-46</pages><issn>0305-7364</issn><eissn>1095-8290</eissn><abstract>Clines, the gradual variation in measurable traits along a geographical axis, play a major role in evolution and can contribute to our understanding of the relative roles of selective and neutral process in trait variation. Using genetic and morphological analyses, the relative contributions of neutral and non-neutral processes were explored to infer the evolutionary history of species of the series Sakawanum (genus Asarum), which shows significant clinal variation in calyx lobe length.
A total of 27 populations covering the natural geographical distribution of the series Sakawanum were sampled. Six nuclear microsatellite markers were used to investigate genetic structure and genetic diversity. The lengths of calyx lobes of multiple populations were measured to quantify their geographical and taxonomic differentiation. To detect the potential impact of selective pressure, morphological differentiation was compared with genetic differentiation (QCT-FST comparison).
Average calyx lobe length of A. minamitanianum was 124.11 mm, while that of A. costatum was 13.80 mm. Though gradually changing along the geographical axis within series, calyx lobe lengths were significantly differentiated among the taxa. Genetic differentiation between taxa was low (FST = 0.099), but a significant geographical structure along the morphological cline was detected. Except for one taxon pair, pairwise QCT values were significantly higher than the neutral genetic measures of FST and G'ST.
Divergent selection may have driven the calyx lobe length variation in series Sakawanum taxa, although the underlying mechanism is still not clear. The low genetic differentiation indicates recent divergence and/or gene flows between geographically close taxa. These neutral processes would also affect the clinal variation in calyx lobe lengths. Overall, this study implies the roles of population history and divergent selection in shaping the current cline of a flower trait in the series Sakawanum.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>29186343</pmid><doi>10.1093/aob/mcx122</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Aristolochiaceae - anatomy & histology Aristolochiaceae - genetics Flowers - anatomy & histology Flowers - genetics Genetic Variation Geography Microsatellite Repeats - genetics Original Phylogeny Phylogeography |
title | Relative contributions of neutral and non-neutral processes to clinal variation in calyx lobe length in the series Sakawanum (Asarum: Aristolochiaceae) |
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