High inbreeding and low connectivity among Ambystoma texanum populations in fragmented Ohio forests
Habitat loss and fragmentation negatively impact the size and diversity of many natural populations. Woodland amphibians require connected aquatic and terrestrial habitats to complete their life cycle, and often rely on metapopulation structure for long‐term persistence. Wetland loss and deforestati...
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Veröffentlicht in: | Ecology and evolution 2017-12, Vol.7 (24), p.11135-11147 |
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description | Habitat loss and fragmentation negatively impact the size and diversity of many natural populations. Woodland amphibians require connected aquatic and terrestrial habitats to complete their life cycle, and often rely on metapopulation structure for long‐term persistence. Wetland loss and deforestation fragment amphibian populations, which may result in population isolation and its negative effects. The aim of this research was to analyze the population genetic structure of small‐mouthed salamanders (Ambystoma texanum) in western Ohio, where agriculture is now the dominant land use. Salamander tail tissue was collected from eight breeding pools. Three pools occur in the same forest; the other five are in forest patches at distances ranging from 250 m to 20 km from one another. Eight microsatellite loci were amplified by PCR and genotyped for allele size. Observed heterozygosities were lower than expected in all sampled populations; the two most isolated sites (Ha1, Ha2) had the highest inbreeding coefficients. Ha2 also had the lowest mean number of alleles and was found to be genetically differentiated from populations to which our data analysis indicates it was historically connected by gene flow. The most distant site (Ha1) had the highest number of private alleles and showed genetic differentiation from other populations both historically and currently. Geographic distance between pools was strongly correlated with the number of private alleles in a population. The results suggest that population isolation results in decreased genetic diversity and that a breakdown of metapopulation structure due to landscape change may contribute to differentiation between once‐connected populations.
Habitat fragmentation may be disrupting the metapopulation structure of Ambystoma texanum in central Ohio. Results indicate loss of connectivity and high inbreeding in sampled populations. |
doi_str_mv | 10.1002/ece3.3637 |
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Habitat fragmentation may be disrupting the metapopulation structure of Ambystoma texanum in central Ohio. Results indicate loss of connectivity and high inbreeding in sampled populations.</description><identifier>ISSN: 2045-7758</identifier><identifier>EISSN: 2045-7758</identifier><identifier>DOI: 10.1002/ece3.3637</identifier><identifier>PMID: 29299288</identifier><language>eng</language><publisher>England: John Wiley & Sons, Inc</publisher><subject>Alleles ; Ambystoma texanum ; Amphibians ; Aquatic habitats ; Breeding ; Data analysis ; Data processing ; Deforestation ; Differentiation ; Forests ; Fragmentation ; Gene flow ; Genetic diversity ; Genetic structure ; Habitat fragmentation ; Habitat loss ; Historical account ; Inbreeding ; Land use ; Landscape ; landscape genetics ; Life cycle engineering ; Life cycles ; Metapopulations ; microsatellites ; mole salamanders ; Natural populations ; Original Research ; Population ; Population genetics ; population structure ; Populations ; Reptiles & amphibians ; Terrestrial environments</subject><ispartof>Ecology and evolution, 2017-12, Vol.7 (24), p.11135-11147</ispartof><rights>2017 The Authors. published by John Wiley & Sons Ltd.</rights><rights>2017. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4437-4786b39eefb9da5b5e24c935fcf66e1d72e21e89e2bade1086730212979ce7363</citedby><cites>FETCH-LOGICAL-c4437-4786b39eefb9da5b5e24c935fcf66e1d72e21e89e2bade1086730212979ce7363</cites><orcidid>0000-0001-7156-9948</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5743690/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5743690/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,1416,11560,27922,27923,45572,45573,46050,46474,53789,53791</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29299288$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rhoads, Elizabeth A.</creatorcontrib><creatorcontrib>Williams, Patrick Kelly</creatorcontrib><creatorcontrib>Krane, Carissa M.</creatorcontrib><title>High inbreeding and low connectivity among Ambystoma texanum populations in fragmented Ohio forests</title><title>Ecology and evolution</title><addtitle>Ecol Evol</addtitle><description>Habitat loss and fragmentation negatively impact the size and diversity of many natural populations. Woodland amphibians require connected aquatic and terrestrial habitats to complete their life cycle, and often rely on metapopulation structure for long‐term persistence. Wetland loss and deforestation fragment amphibian populations, which may result in population isolation and its negative effects. The aim of this research was to analyze the population genetic structure of small‐mouthed salamanders (Ambystoma texanum) in western Ohio, where agriculture is now the dominant land use. Salamander tail tissue was collected from eight breeding pools. Three pools occur in the same forest; the other five are in forest patches at distances ranging from 250 m to 20 km from one another. Eight microsatellite loci were amplified by PCR and genotyped for allele size. Observed heterozygosities were lower than expected in all sampled populations; the two most isolated sites (Ha1, Ha2) had the highest inbreeding coefficients. Ha2 also had the lowest mean number of alleles and was found to be genetically differentiated from populations to which our data analysis indicates it was historically connected by gene flow. The most distant site (Ha1) had the highest number of private alleles and showed genetic differentiation from other populations both historically and currently. Geographic distance between pools was strongly correlated with the number of private alleles in a population. The results suggest that population isolation results in decreased genetic diversity and that a breakdown of metapopulation structure due to landscape change may contribute to differentiation between once‐connected populations.
Habitat fragmentation may be disrupting the metapopulation structure of Ambystoma texanum in central Ohio. Results indicate loss of connectivity and high inbreeding in sampled populations.</description><subject>Alleles</subject><subject>Ambystoma texanum</subject><subject>Amphibians</subject><subject>Aquatic habitats</subject><subject>Breeding</subject><subject>Data analysis</subject><subject>Data processing</subject><subject>Deforestation</subject><subject>Differentiation</subject><subject>Forests</subject><subject>Fragmentation</subject><subject>Gene flow</subject><subject>Genetic diversity</subject><subject>Genetic structure</subject><subject>Habitat fragmentation</subject><subject>Habitat loss</subject><subject>Historical account</subject><subject>Inbreeding</subject><subject>Land use</subject><subject>Landscape</subject><subject>landscape genetics</subject><subject>Life cycle engineering</subject><subject>Life cycles</subject><subject>Metapopulations</subject><subject>microsatellites</subject><subject>mole salamanders</subject><subject>Natural populations</subject><subject>Original Research</subject><subject>Population</subject><subject>Population genetics</subject><subject>population structure</subject><subject>Populations</subject><subject>Reptiles & amphibians</subject><subject>Terrestrial environments</subject><issn>2045-7758</issn><issn>2045-7758</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kU9L5DAYxoOsrKIe9gtIYC_rYTT_2jSXBRnGPyB40XNI07czkTaZTVp1vr2po-IK5pLA--OXJ3kQ-kXJKSWEnYEFfspLLnfQPiOimElZVD8-nffQUUoPJK-SMEHkT7THFFOKVdU-slduucLO1xGgcX6JjW9wF56wDd6DHdyjGzbY9CGPzvt6k4bQGzzAs_Fjj9dhPXZmcMGn7MBtNMse_AANvl25gNsQIQ3pEO22pktw9LYfoPuLxd38anZze3k9P7-ZWSG4nAlZlTVXAG2tGlPUBTBhFS9a25Yl0EYyYBQqBaw2DVBSlZITRpmSyoLMP3CA_m6967HuobE5STSdXkfXm7jRwTj9_8S7lV6GR11IwUtFsuDPmyCGf2OOrnuXLHSd8RDGpKmqhCwEeb3r9xf0IYzR5-dNlCq5kHSiTraUjSGlCO1HGEr01J6e2tNTe5k9_pz-g3zvKgNnW-DJdbD53qQX8wV_Vb4A196law</recordid><startdate>201712</startdate><enddate>201712</enddate><creator>Rhoads, Elizabeth A.</creator><creator>Williams, Patrick Kelly</creator><creator>Krane, Carissa M.</creator><general>John Wiley & Sons, Inc</general><general>John Wiley and Sons Inc</general><scope>24P</scope><scope>WIN</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7X2</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-7156-9948</orcidid></search><sort><creationdate>201712</creationdate><title>High inbreeding and low connectivity among Ambystoma texanum populations in fragmented Ohio forests</title><author>Rhoads, Elizabeth A. ; Williams, Patrick Kelly ; Krane, Carissa M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4437-4786b39eefb9da5b5e24c935fcf66e1d72e21e89e2bade1086730212979ce7363</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Alleles</topic><topic>Ambystoma texanum</topic><topic>Amphibians</topic><topic>Aquatic habitats</topic><topic>Breeding</topic><topic>Data analysis</topic><topic>Data processing</topic><topic>Deforestation</topic><topic>Differentiation</topic><topic>Forests</topic><topic>Fragmentation</topic><topic>Gene flow</topic><topic>Genetic diversity</topic><topic>Genetic structure</topic><topic>Habitat fragmentation</topic><topic>Habitat loss</topic><topic>Historical account</topic><topic>Inbreeding</topic><topic>Land use</topic><topic>Landscape</topic><topic>landscape genetics</topic><topic>Life cycle engineering</topic><topic>Life cycles</topic><topic>Metapopulations</topic><topic>microsatellites</topic><topic>mole salamanders</topic><topic>Natural populations</topic><topic>Original Research</topic><topic>Population</topic><topic>Population genetics</topic><topic>population structure</topic><topic>Populations</topic><topic>Reptiles & amphibians</topic><topic>Terrestrial environments</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rhoads, Elizabeth A.</creatorcontrib><creatorcontrib>Williams, Patrick Kelly</creatorcontrib><creatorcontrib>Krane, Carissa M.</creatorcontrib><collection>Wiley-Blackwell Open Access Titles</collection><collection>Wiley Free Content</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Ecology and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rhoads, Elizabeth A.</au><au>Williams, Patrick Kelly</au><au>Krane, Carissa M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>High inbreeding and low connectivity among Ambystoma texanum populations in fragmented Ohio forests</atitle><jtitle>Ecology and evolution</jtitle><addtitle>Ecol Evol</addtitle><date>2017-12</date><risdate>2017</risdate><volume>7</volume><issue>24</issue><spage>11135</spage><epage>11147</epage><pages>11135-11147</pages><issn>2045-7758</issn><eissn>2045-7758</eissn><abstract>Habitat loss and fragmentation negatively impact the size and diversity of many natural populations. Woodland amphibians require connected aquatic and terrestrial habitats to complete their life cycle, and often rely on metapopulation structure for long‐term persistence. Wetland loss and deforestation fragment amphibian populations, which may result in population isolation and its negative effects. The aim of this research was to analyze the population genetic structure of small‐mouthed salamanders (Ambystoma texanum) in western Ohio, where agriculture is now the dominant land use. Salamander tail tissue was collected from eight breeding pools. Three pools occur in the same forest; the other five are in forest patches at distances ranging from 250 m to 20 km from one another. Eight microsatellite loci were amplified by PCR and genotyped for allele size. Observed heterozygosities were lower than expected in all sampled populations; the two most isolated sites (Ha1, Ha2) had the highest inbreeding coefficients. Ha2 also had the lowest mean number of alleles and was found to be genetically differentiated from populations to which our data analysis indicates it was historically connected by gene flow. The most distant site (Ha1) had the highest number of private alleles and showed genetic differentiation from other populations both historically and currently. Geographic distance between pools was strongly correlated with the number of private alleles in a population. The results suggest that population isolation results in decreased genetic diversity and that a breakdown of metapopulation structure due to landscape change may contribute to differentiation between once‐connected populations.
Habitat fragmentation may be disrupting the metapopulation structure of Ambystoma texanum in central Ohio. Results indicate loss of connectivity and high inbreeding in sampled populations.</abstract><cop>England</cop><pub>John Wiley & Sons, Inc</pub><pmid>29299288</pmid><doi>10.1002/ece3.3637</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0001-7156-9948</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Alleles Ambystoma texanum Amphibians Aquatic habitats Breeding Data analysis Data processing Deforestation Differentiation Forests Fragmentation Gene flow Genetic diversity Genetic structure Habitat fragmentation Habitat loss Historical account Inbreeding Land use Landscape landscape genetics Life cycle engineering Life cycles Metapopulations microsatellites mole salamanders Natural populations Original Research Population Population genetics population structure Populations Reptiles & amphibians Terrestrial environments |
title | High inbreeding and low connectivity among Ambystoma texanum populations in fragmented Ohio forests |
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