Selection and validation of predictive models of radiation effects on tumor growth based on noninvasive imaging data

The use of mathematical and computational models for reliable predictions of tumor growth and decline in living organisms is one of the foremost challenges in modern predictive science, as it must cope with uncertainties in observational data, model selection, model parameters, and model inadequacy,...

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Veröffentlicht in:Computer methods in applied mechanics and engineering 2017-12, Vol.327 (C), p.277-305
Hauptverfasser: Lima, E.A.B.F., Oden, J.T., Wohlmuth, B., Shahmoradi, A., Hormuth, D.A., Yankeelov, T.E., Scarabosio, L., Horger, T.
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container_title Computer methods in applied mechanics and engineering
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creator Lima, E.A.B.F.
Oden, J.T.
Wohlmuth, B.
Shahmoradi, A.
Hormuth, D.A.
Yankeelov, T.E.
Scarabosio, L.
Horger, T.
description The use of mathematical and computational models for reliable predictions of tumor growth and decline in living organisms is one of the foremost challenges in modern predictive science, as it must cope with uncertainties in observational data, model selection, model parameters, and model inadequacy, all for very complex physical and biological systems. In this paper, large classes of parametric models of tumor growth in vascular tissue are discussed including models for radiation therapy. Observational data is obtained from MRI of a murine model of glioma and observed over a period of about three weeks, with X-ray radiation administered 14.5 days into the experimental program. Parametric models of tumor proliferation and decline are presented based on the balance laws of continuum mixture theory, particularly mass balance, and from accepted biological hypotheses on tumor growth. Among these are new model classes that include characterizations of effects of radiation and simple models of mechanical deformation of tumors. The Occam Plausibility Algorithm (OPAL) is implemented to provide a Bayesian statistical calibration of the model classes, 39 models in all, as well as the determination of the most plausible models in these classes relative to the observational data, and to assess model inadequacy through statistical validation processes. Discussions of the numerical analysis of finite element approximations of the system of stochastic, nonlinear partial differential equations characterizing the model classes, as well as the sampling algorithms for Monte Carlo and Markov chain Monte Carlo (MCMC) methods employed in solving the forward stochastic problem, and in computing posterior distributions of parameters and model plausibilities are provided. The results of the analyses described suggest that the general framework developed can provide a useful approach for predicting tumor growth and the effects of radiation. •This paper presents a comprehensive approach to predict the growth of tumors in laboratory animals accounting for uncertainties in data, model selection, model inadequacy, and in model outputs.•Systems of stochastic partial differential equations are derived that characterize models of volume fractions of cell species, mechanical effects, and chemical potentials that depict the evolution of tumor masses.•Non-invasive MRI data on the growth of glioma in the brains of rat subjects are collected to provide a basis for model calibration, validation,
doi_str_mv 10.1016/j.cma.2017.08.009
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The Occam Plausibility Algorithm (OPAL) is implemented to provide a Bayesian statistical calibration of the model classes, 39 models in all, as well as the determination of the most plausible models in these classes relative to the observational data, and to assess model inadequacy through statistical validation processes. Discussions of the numerical analysis of finite element approximations of the system of stochastic, nonlinear partial differential equations characterizing the model classes, as well as the sampling algorithms for Monte Carlo and Markov chain Monte Carlo (MCMC) methods employed in solving the forward stochastic problem, and in computing posterior distributions of parameters and model plausibilities are provided. 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The Occam Plausibility Algorithm (OPAL) is implemented to provide a Bayesian statistical calibration of the model classes, 39 models in all, as well as the determination of the most plausible models in these classes relative to the observational data, and to assess model inadequacy through statistical validation processes. Discussions of the numerical analysis of finite element approximations of the system of stochastic, nonlinear partial differential equations characterizing the model classes, as well as the sampling algorithms for Monte Carlo and Markov chain Monte Carlo (MCMC) methods employed in solving the forward stochastic problem, and in computing posterior distributions of parameters and model plausibilities are provided. 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ispartof Computer methods in applied mechanics and engineering, 2017-12, Vol.327 (C), p.277-305
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source Elsevier ScienceDirect Journals Complete - AutoHoldings
subjects Bayesian analysis
Bayesian inference
Calibration and Validation of Phenomenological models
Cancer
Computer simulation
Deformation effects
Finite element method
Markov chains
Mathematical models
Model plausibilities
Monte Carlo methods
Monte Carlo simulation
MRI imaging
Nonlinear differential equations
Nonlinear equations
Numerical analysis
Parameter uncertainty
Partial differential equations
Prediction models
Radiation effects
Radiation therapy
Studies
Tumors
Vascular tissue
title Selection and validation of predictive models of radiation effects on tumor growth based on noninvasive imaging data
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