Unveiling the role and life strategies of viruses from the surface to the dark ocean
Viruses are a key component of marine ecosystems, but the assessment of their global role in regulating microbial communities and the flux of carbon is precluded by a paucity of data, particularly in the deep ocean. We assessed patterns in viral abundance and production and the role of viral lysis a...
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creator | Lara, Elena Vaqué, Dolors Sà, Elisabet Laia Boras, Julia A Gomes, Ana Borrull, Encarna Díez-Vives, Cristina Teira, Eva Pernice, Massimo C Garcia, Francisca C Forn, Irene Castillo, Yaiza M Peiró, Aida Salazar, Guillem Morán, Xosé Anxelu G Massana, Ramon Catalá, Teresa S Luna, Gian Marco Agustí, Susana Estrada, Marta Gasol, Josep M Duarte, Carlos M |
description | Viruses are a key component of marine ecosystems, but the assessment of their global role in regulating microbial communities and the flux of carbon is precluded by a paucity of data, particularly in the deep ocean. We assessed patterns in viral abundance and production and the role of viral lysis as a driver of prokaryote mortality, from surface to bathypelagic layers, across the tropical and subtropical oceans. Viral abundance showed significant differences between oceans in the epipelagic and mesopelagic, but not in the bathypelagic, and decreased with depth, with an average power-law scaling exponent of -1.03 km
from an average of 7.76 × 10
viruses ml
in the epipelagic to 0.62 × 10
viruses ml
in the bathypelagic layer with an average integrated (0 to 4000 m) viral stock of about 0.004 to 0.044 g C m
, half of which is found below 775 m. Lysogenic viral production was higher than lytic viral production in surface waters, whereas the opposite was found in the bathypelagic, where prokaryotic mortality due to viruses was estimated to be 60 times higher than grazing. Free viruses had turnover times of 0.1 days in the bathypelagic, revealing that viruses in the bathypelagic are highly dynamic. On the basis of the rates of lysed prokaryotic cells, we estimated that viruses release 145 Gt C year
in the global tropical and subtropical oceans. The active viral processes reported here demonstrate the importance of viruses in the production of dissolved organic carbon in the dark ocean, a major pathway in carbon cycling. |
doi_str_mv | 10.1126/sciadv.1602565 |
format | Article |
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from an average of 7.76 × 10
viruses ml
in the epipelagic to 0.62 × 10
viruses ml
in the bathypelagic layer with an average integrated (0 to 4000 m) viral stock of about 0.004 to 0.044 g C m
, half of which is found below 775 m. Lysogenic viral production was higher than lytic viral production in surface waters, whereas the opposite was found in the bathypelagic, where prokaryotic mortality due to viruses was estimated to be 60 times higher than grazing. Free viruses had turnover times of 0.1 days in the bathypelagic, revealing that viruses in the bathypelagic are highly dynamic. On the basis of the rates of lysed prokaryotic cells, we estimated that viruses release 145 Gt C year
in the global tropical and subtropical oceans. The active viral processes reported here demonstrate the importance of viruses in the production of dissolved organic carbon in the dark ocean, a major pathway in carbon cycling.</description><identifier>ISSN: 2375-2548</identifier><identifier>EISSN: 2375-2548</identifier><identifier>DOI: 10.1126/sciadv.1602565</identifier><identifier>PMID: 28913418</identifier><language>eng</language><publisher>United States: American Association for the Advancement of Science</publisher><subject>Analysis of Variance ; Biodiversity ; Ecosystem ; Environmental Microbiology ; Environmental Studies ; Geography ; Marine Ecology ; Oceans and Seas ; SciAdv r-articles ; Soil ; Virus Physiological Phenomena</subject><ispartof>Science advances, 2017-09, Vol.3 (9), p.e1602565-e1602565</ispartof><rights>Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). 2017 The Authors</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c456t-129f34fd49a7a5512c9d61a4003360b4f592ac2c001b30bc7a50a29d2a699d403</citedby><cites>FETCH-LOGICAL-c456t-129f34fd49a7a5512c9d61a4003360b4f592ac2c001b30bc7a50a29d2a699d403</cites><orcidid>0000-0001-5843-5806 ; 0000-0002-1213-1361 ; 0000-0001-5238-2387 ; 0000-0002-9786-1493 ; 0000-0003-0536-7293 ; 0000-0002-4625-348X ; 0000-0001-7737-6805 ; 0000-0002-9511-3002 ; 0000-0002-9823-5339</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5587022/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5587022/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28913418$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lara, Elena</creatorcontrib><creatorcontrib>Vaqué, Dolors</creatorcontrib><creatorcontrib>Sà, Elisabet Laia</creatorcontrib><creatorcontrib>Boras, Julia A</creatorcontrib><creatorcontrib>Gomes, Ana</creatorcontrib><creatorcontrib>Borrull, Encarna</creatorcontrib><creatorcontrib>Díez-Vives, Cristina</creatorcontrib><creatorcontrib>Teira, Eva</creatorcontrib><creatorcontrib>Pernice, Massimo C</creatorcontrib><creatorcontrib>Garcia, Francisca C</creatorcontrib><creatorcontrib>Forn, Irene</creatorcontrib><creatorcontrib>Castillo, Yaiza M</creatorcontrib><creatorcontrib>Peiró, Aida</creatorcontrib><creatorcontrib>Salazar, Guillem</creatorcontrib><creatorcontrib>Morán, Xosé Anxelu G</creatorcontrib><creatorcontrib>Massana, Ramon</creatorcontrib><creatorcontrib>Catalá, Teresa S</creatorcontrib><creatorcontrib>Luna, Gian Marco</creatorcontrib><creatorcontrib>Agustí, Susana</creatorcontrib><creatorcontrib>Estrada, Marta</creatorcontrib><creatorcontrib>Gasol, Josep M</creatorcontrib><creatorcontrib>Duarte, Carlos M</creatorcontrib><title>Unveiling the role and life strategies of viruses from the surface to the dark ocean</title><title>Science advances</title><addtitle>Sci Adv</addtitle><description>Viruses are a key component of marine ecosystems, but the assessment of their global role in regulating microbial communities and the flux of carbon is precluded by a paucity of data, particularly in the deep ocean. We assessed patterns in viral abundance and production and the role of viral lysis as a driver of prokaryote mortality, from surface to bathypelagic layers, across the tropical and subtropical oceans. Viral abundance showed significant differences between oceans in the epipelagic and mesopelagic, but not in the bathypelagic, and decreased with depth, with an average power-law scaling exponent of -1.03 km
from an average of 7.76 × 10
viruses ml
in the epipelagic to 0.62 × 10
viruses ml
in the bathypelagic layer with an average integrated (0 to 4000 m) viral stock of about 0.004 to 0.044 g C m
, half of which is found below 775 m. Lysogenic viral production was higher than lytic viral production in surface waters, whereas the opposite was found in the bathypelagic, where prokaryotic mortality due to viruses was estimated to be 60 times higher than grazing. Free viruses had turnover times of 0.1 days in the bathypelagic, revealing that viruses in the bathypelagic are highly dynamic. On the basis of the rates of lysed prokaryotic cells, we estimated that viruses release 145 Gt C year
in the global tropical and subtropical oceans. The active viral processes reported here demonstrate the importance of viruses in the production of dissolved organic carbon in the dark ocean, a major pathway in carbon cycling.</description><subject>Analysis of Variance</subject><subject>Biodiversity</subject><subject>Ecosystem</subject><subject>Environmental Microbiology</subject><subject>Environmental Studies</subject><subject>Geography</subject><subject>Marine Ecology</subject><subject>Oceans and Seas</subject><subject>SciAdv r-articles</subject><subject>Soil</subject><subject>Virus Physiological Phenomena</subject><issn>2375-2548</issn><issn>2375-2548</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkUtLAzEUhYMottRuXUqWblrz7mQjSPEFBTftOmQySRudmdRkZsB_7_Rhqat7LvlycsgB4BajKcZEPCTjddFNsUCEC34BhoTO-IRwll2e6QEYp_SJEMJMCI7lNRiQTGLKcDYEy1XdWV_6eg2bjYUxlBbquoCldxamJurGrr1NMDjY-dimXroYqj2c2ui0sbAJ-7XQ8QsGY3V9A66cLpMdH-cIrF6el_O3yeLj9X3-tJgYxkUzwUQ6ylzBpJ5pzjExshBYM4QoFShnjkuiDTF98pyi3PQQ0kQWRAspC4boCDwefLdtXtnC2LoPXKpt9JWOPypor_6f1H6j1qFTnGczREhvcH80iOG7talRlU_GlqWubWiTwrIPwylmO3R6QE0MKUXrTs9gpHZtqEMb6thGf-HuPNwJ__t7-gvD2ocH</recordid><startdate>20170901</startdate><enddate>20170901</enddate><creator>Lara, Elena</creator><creator>Vaqué, Dolors</creator><creator>Sà, Elisabet Laia</creator><creator>Boras, Julia A</creator><creator>Gomes, Ana</creator><creator>Borrull, Encarna</creator><creator>Díez-Vives, Cristina</creator><creator>Teira, Eva</creator><creator>Pernice, Massimo C</creator><creator>Garcia, Francisca C</creator><creator>Forn, Irene</creator><creator>Castillo, Yaiza M</creator><creator>Peiró, Aida</creator><creator>Salazar, Guillem</creator><creator>Morán, Xosé Anxelu G</creator><creator>Massana, Ramon</creator><creator>Catalá, Teresa S</creator><creator>Luna, Gian Marco</creator><creator>Agustí, Susana</creator><creator>Estrada, Marta</creator><creator>Gasol, Josep M</creator><creator>Duarte, Carlos M</creator><general>American Association for the Advancement of Science</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-5843-5806</orcidid><orcidid>https://orcid.org/0000-0002-1213-1361</orcidid><orcidid>https://orcid.org/0000-0001-5238-2387</orcidid><orcidid>https://orcid.org/0000-0002-9786-1493</orcidid><orcidid>https://orcid.org/0000-0003-0536-7293</orcidid><orcidid>https://orcid.org/0000-0002-4625-348X</orcidid><orcidid>https://orcid.org/0000-0001-7737-6805</orcidid><orcidid>https://orcid.org/0000-0002-9511-3002</orcidid><orcidid>https://orcid.org/0000-0002-9823-5339</orcidid></search><sort><creationdate>20170901</creationdate><title>Unveiling the role and life strategies of viruses from the surface to the dark ocean</title><author>Lara, Elena ; Vaqué, Dolors ; Sà, Elisabet Laia ; Boras, Julia A ; Gomes, Ana ; Borrull, Encarna ; Díez-Vives, Cristina ; Teira, Eva ; Pernice, Massimo C ; Garcia, Francisca C ; Forn, Irene ; Castillo, Yaiza M ; Peiró, Aida ; Salazar, Guillem ; Morán, Xosé Anxelu G ; Massana, Ramon ; Catalá, Teresa S ; Luna, Gian Marco ; Agustí, Susana ; Estrada, Marta ; Gasol, Josep M ; Duarte, Carlos M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c456t-129f34fd49a7a5512c9d61a4003360b4f592ac2c001b30bc7a50a29d2a699d403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Analysis of Variance</topic><topic>Biodiversity</topic><topic>Ecosystem</topic><topic>Environmental Microbiology</topic><topic>Environmental Studies</topic><topic>Geography</topic><topic>Marine Ecology</topic><topic>Oceans and Seas</topic><topic>SciAdv r-articles</topic><topic>Soil</topic><topic>Virus Physiological Phenomena</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lara, Elena</creatorcontrib><creatorcontrib>Vaqué, Dolors</creatorcontrib><creatorcontrib>Sà, Elisabet Laia</creatorcontrib><creatorcontrib>Boras, Julia A</creatorcontrib><creatorcontrib>Gomes, Ana</creatorcontrib><creatorcontrib>Borrull, Encarna</creatorcontrib><creatorcontrib>Díez-Vives, Cristina</creatorcontrib><creatorcontrib>Teira, Eva</creatorcontrib><creatorcontrib>Pernice, Massimo C</creatorcontrib><creatorcontrib>Garcia, Francisca C</creatorcontrib><creatorcontrib>Forn, Irene</creatorcontrib><creatorcontrib>Castillo, Yaiza M</creatorcontrib><creatorcontrib>Peiró, Aida</creatorcontrib><creatorcontrib>Salazar, Guillem</creatorcontrib><creatorcontrib>Morán, Xosé Anxelu G</creatorcontrib><creatorcontrib>Massana, Ramon</creatorcontrib><creatorcontrib>Catalá, Teresa S</creatorcontrib><creatorcontrib>Luna, Gian Marco</creatorcontrib><creatorcontrib>Agustí, Susana</creatorcontrib><creatorcontrib>Estrada, Marta</creatorcontrib><creatorcontrib>Gasol, Josep M</creatorcontrib><creatorcontrib>Duarte, Carlos M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Science advances</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lara, Elena</au><au>Vaqué, Dolors</au><au>Sà, Elisabet Laia</au><au>Boras, Julia A</au><au>Gomes, Ana</au><au>Borrull, Encarna</au><au>Díez-Vives, Cristina</au><au>Teira, Eva</au><au>Pernice, Massimo C</au><au>Garcia, Francisca C</au><au>Forn, Irene</au><au>Castillo, Yaiza M</au><au>Peiró, Aida</au><au>Salazar, Guillem</au><au>Morán, Xosé Anxelu G</au><au>Massana, Ramon</au><au>Catalá, Teresa S</au><au>Luna, Gian Marco</au><au>Agustí, Susana</au><au>Estrada, Marta</au><au>Gasol, Josep M</au><au>Duarte, Carlos M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Unveiling the role and life strategies of viruses from the surface to the dark ocean</atitle><jtitle>Science advances</jtitle><addtitle>Sci Adv</addtitle><date>2017-09-01</date><risdate>2017</risdate><volume>3</volume><issue>9</issue><spage>e1602565</spage><epage>e1602565</epage><pages>e1602565-e1602565</pages><issn>2375-2548</issn><eissn>2375-2548</eissn><abstract>Viruses are a key component of marine ecosystems, but the assessment of their global role in regulating microbial communities and the flux of carbon is precluded by a paucity of data, particularly in the deep ocean. We assessed patterns in viral abundance and production and the role of viral lysis as a driver of prokaryote mortality, from surface to bathypelagic layers, across the tropical and subtropical oceans. Viral abundance showed significant differences between oceans in the epipelagic and mesopelagic, but not in the bathypelagic, and decreased with depth, with an average power-law scaling exponent of -1.03 km
from an average of 7.76 × 10
viruses ml
in the epipelagic to 0.62 × 10
viruses ml
in the bathypelagic layer with an average integrated (0 to 4000 m) viral stock of about 0.004 to 0.044 g C m
, half of which is found below 775 m. Lysogenic viral production was higher than lytic viral production in surface waters, whereas the opposite was found in the bathypelagic, where prokaryotic mortality due to viruses was estimated to be 60 times higher than grazing. Free viruses had turnover times of 0.1 days in the bathypelagic, revealing that viruses in the bathypelagic are highly dynamic. On the basis of the rates of lysed prokaryotic cells, we estimated that viruses release 145 Gt C year
in the global tropical and subtropical oceans. The active viral processes reported here demonstrate the importance of viruses in the production of dissolved organic carbon in the dark ocean, a major pathway in carbon cycling.</abstract><cop>United States</cop><pub>American Association for the Advancement of Science</pub><pmid>28913418</pmid><doi>10.1126/sciadv.1602565</doi><orcidid>https://orcid.org/0000-0001-5843-5806</orcidid><orcidid>https://orcid.org/0000-0002-1213-1361</orcidid><orcidid>https://orcid.org/0000-0001-5238-2387</orcidid><orcidid>https://orcid.org/0000-0002-9786-1493</orcidid><orcidid>https://orcid.org/0000-0003-0536-7293</orcidid><orcidid>https://orcid.org/0000-0002-4625-348X</orcidid><orcidid>https://orcid.org/0000-0001-7737-6805</orcidid><orcidid>https://orcid.org/0000-0002-9511-3002</orcidid><orcidid>https://orcid.org/0000-0002-9823-5339</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Analysis of Variance Biodiversity Ecosystem Environmental Microbiology Environmental Studies Geography Marine Ecology Oceans and Seas SciAdv r-articles Soil Virus Physiological Phenomena |
title | Unveiling the role and life strategies of viruses from the surface to the dark ocean |
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