Increased Expression of Plasma-Induced ABCC1 mRNA in Cystic Fibrosis
The gene is structurally and functionally related to the cystic fibrosis transmembrane conductance regulator gene ( ). Upregulation of is thought to improve lung function in patients with cystic fibrosis (CF); the mechanism underlying this effect is unknown. We analyzed the promoter single nucleotid...
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creator | Ideozu, Justin E Zhang, Xi Pan, Amy Ashrafi, Zainub Woods, Katherine J Hessner, Martin J Simpson, Pippa Levy, Hara |
description | The
gene is structurally and functionally related to the cystic fibrosis transmembrane conductance regulator gene (
). Upregulation of
is thought to improve lung function in patients with cystic fibrosis (CF); the mechanism underlying this effect is unknown. We analyzed the
promoter single nucleotide polymorphism (SNP rs504348), plasma-induced
mRNA expression levels, and
methylation status and their correlation with clinical variables among CF subjects with differing
mutations. We assigned 93 CF subjects into disease severity groups and genotyped SNP rs504348. For 23 CF subjects and 7 healthy controls, donor peripheral blood mononuclear cells (PBMCs) stimulated with plasma underwent gene expression analysis via qRT-PCR.
promoter methylation was analyzed in the same 23 CF subjects. No significant correlation was observed between rs504348 genotypes and CF disease severity, but pancreatic insufficient CF subjects showed increased colonization with any form of
(OR = 3.125, 95% CI: 1.192-8.190) and mucoid
(OR = 5.075, 95% CI: 1.307-28.620) compared to the pancreatic sufficient group. A significantly higher expression of
mRNA was induced by CF plasma compared to healthy control plasma (
< 0.001). CF subjects with rs504348 (CC/CG) also had higher mRNA expression compared to those with the ancestral GG genotype (
< 0.005).
promoter was completely unmethylated; therefore, we did not detect any association between methylation and CF disease severity. In silico predictions suggested that histone modifications are crucial for regulating
expression in PBMCs. Our results suggest that
expression has a role in
activity thereby increasing our understanding of the molecular underpinnings of the clinical heterogeneity in CF. |
doi_str_mv | 10.3390/ijms18081752 |
format | Article |
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gene is structurally and functionally related to the cystic fibrosis transmembrane conductance regulator gene (
). Upregulation of
is thought to improve lung function in patients with cystic fibrosis (CF); the mechanism underlying this effect is unknown. We analyzed the
promoter single nucleotide polymorphism (SNP rs504348), plasma-induced
mRNA expression levels, and
methylation status and their correlation with clinical variables among CF subjects with differing
mutations. We assigned 93 CF subjects into disease severity groups and genotyped SNP rs504348. For 23 CF subjects and 7 healthy controls, donor peripheral blood mononuclear cells (PBMCs) stimulated with plasma underwent gene expression analysis via qRT-PCR.
promoter methylation was analyzed in the same 23 CF subjects. No significant correlation was observed between rs504348 genotypes and CF disease severity, but pancreatic insufficient CF subjects showed increased colonization with any form of
(OR = 3.125, 95% CI: 1.192-8.190) and mucoid
(OR = 5.075, 95% CI: 1.307-28.620) compared to the pancreatic sufficient group. A significantly higher expression of
mRNA was induced by CF plasma compared to healthy control plasma (
< 0.001). CF subjects with rs504348 (CC/CG) also had higher mRNA expression compared to those with the ancestral GG genotype (
< 0.005).
promoter was completely unmethylated; therefore, we did not detect any association between methylation and CF disease severity. In silico predictions suggested that histone modifications are crucial for regulating
expression in PBMCs. Our results suggest that
expression has a role in
activity thereby increasing our understanding of the molecular underpinnings of the clinical heterogeneity in CF.</description><identifier>ISSN: 1422-0067</identifier><identifier>ISSN: 1661-6596</identifier><identifier>EISSN: 1422-0067</identifier><identifier>DOI: 10.3390/ijms18081752</identifier><identifier>PMID: 28800122</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Colonization ; Conductance ; Cystic fibrosis ; DNA methylation ; Gene expression ; Gene polymorphism ; Leukocytes (mononuclear) ; MicroRNAs ; Mutation ; Pancreas ; Peripheral blood mononuclear cells ; Plasma ; Plasmas (physics) ; Polymorphism ; Pseudomonas aeruginosa ; Respiratory function ; Single-nucleotide polymorphism</subject><ispartof>International journal of molecular sciences, 2017-08, Vol.18 (8), p.1752</ispartof><rights>Copyright MDPI AG 2017</rights><rights>2017 by the authors. 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c412t-9d0438c5e743d3c0360a3cc01d1cbe55ca813081d95de867fe48e8160b0984773</citedby><cites>FETCH-LOGICAL-c412t-9d0438c5e743d3c0360a3cc01d1cbe55ca813081d95de867fe48e8160b0984773</cites><orcidid>0000-0002-3784-0711</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5578142/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5578142/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28800122$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ideozu, Justin E</creatorcontrib><creatorcontrib>Zhang, Xi</creatorcontrib><creatorcontrib>Pan, Amy</creatorcontrib><creatorcontrib>Ashrafi, Zainub</creatorcontrib><creatorcontrib>Woods, Katherine J</creatorcontrib><creatorcontrib>Hessner, Martin J</creatorcontrib><creatorcontrib>Simpson, Pippa</creatorcontrib><creatorcontrib>Levy, Hara</creatorcontrib><title>Increased Expression of Plasma-Induced ABCC1 mRNA in Cystic Fibrosis</title><title>International journal of molecular sciences</title><addtitle>Int J Mol Sci</addtitle><description>The
gene is structurally and functionally related to the cystic fibrosis transmembrane conductance regulator gene (
). Upregulation of
is thought to improve lung function in patients with cystic fibrosis (CF); the mechanism underlying this effect is unknown. We analyzed the
promoter single nucleotide polymorphism (SNP rs504348), plasma-induced
mRNA expression levels, and
methylation status and their correlation with clinical variables among CF subjects with differing
mutations. We assigned 93 CF subjects into disease severity groups and genotyped SNP rs504348. For 23 CF subjects and 7 healthy controls, donor peripheral blood mononuclear cells (PBMCs) stimulated with plasma underwent gene expression analysis via qRT-PCR.
promoter methylation was analyzed in the same 23 CF subjects. No significant correlation was observed between rs504348 genotypes and CF disease severity, but pancreatic insufficient CF subjects showed increased colonization with any form of
(OR = 3.125, 95% CI: 1.192-8.190) and mucoid
(OR = 5.075, 95% CI: 1.307-28.620) compared to the pancreatic sufficient group. A significantly higher expression of
mRNA was induced by CF plasma compared to healthy control plasma (
< 0.001). CF subjects with rs504348 (CC/CG) also had higher mRNA expression compared to those with the ancestral GG genotype (
< 0.005).
promoter was completely unmethylated; therefore, we did not detect any association between methylation and CF disease severity. In silico predictions suggested that histone modifications are crucial for regulating
expression in PBMCs. Our results suggest that
expression has a role in
activity thereby increasing our understanding of the molecular underpinnings of the clinical heterogeneity in CF.</description><subject>Colonization</subject><subject>Conductance</subject><subject>Cystic fibrosis</subject><subject>DNA methylation</subject><subject>Gene expression</subject><subject>Gene polymorphism</subject><subject>Leukocytes (mononuclear)</subject><subject>MicroRNAs</subject><subject>Mutation</subject><subject>Pancreas</subject><subject>Peripheral blood mononuclear cells</subject><subject>Plasma</subject><subject>Plasmas (physics)</subject><subject>Polymorphism</subject><subject>Pseudomonas aeruginosa</subject><subject>Respiratory function</subject><subject>Single-nucleotide polymorphism</subject><issn>1422-0067</issn><issn>1661-6596</issn><issn>1422-0067</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNpdkd1LwzAUxYMobk7ffJaCLz5YvUmaNn0RZt10MFREn0OapprRj5m04v57I5syfboX7o_DPecgdIzhgtIULs2idpgDxwkjO2iII0JCgDjZ3doH6MC5BQChhKX7aEA4B8CEDNHNrFFWS6eLYPK5tNo50zZBWwaPlXS1DGdN0St_HF9nGQ7qp_txYJogW7nOqGBqcts64w7RXikrp482c4ReppPn7C6cP9zOsvE8VBEmXZgWEFGumE4iWlAFNAZJlQJcYJVrxpTkmHojRcoKzeOk1BHXHMeQQ8qjJKEjdLXWXfZ5rQulm87KSiytqaVdiVYa8ffSmDfx2n4IxhLuw_ACZxsB27732nWiNk7pqpKNbnsncEo4gzgG6tHTf-ii7W3j7XmKpmkUkYR56nxNKR-Es7r8fQaD-K5HbNfj8ZNtA7_wTx_0C-RgiU4</recordid><startdate>20170811</startdate><enddate>20170811</enddate><creator>Ideozu, Justin E</creator><creator>Zhang, Xi</creator><creator>Pan, Amy</creator><creator>Ashrafi, Zainub</creator><creator>Woods, Katherine J</creator><creator>Hessner, Martin J</creator><creator>Simpson, Pippa</creator><creator>Levy, Hara</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>MBDVC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-3784-0711</orcidid></search><sort><creationdate>20170811</creationdate><title>Increased Expression of Plasma-Induced ABCC1 mRNA in Cystic Fibrosis</title><author>Ideozu, Justin E ; Zhang, Xi ; Pan, Amy ; Ashrafi, Zainub ; Woods, Katherine J ; Hessner, Martin J ; Simpson, Pippa ; Levy, Hara</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c412t-9d0438c5e743d3c0360a3cc01d1cbe55ca813081d95de867fe48e8160b0984773</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Colonization</topic><topic>Conductance</topic><topic>Cystic fibrosis</topic><topic>DNA methylation</topic><topic>Gene expression</topic><topic>Gene polymorphism</topic><topic>Leukocytes (mononuclear)</topic><topic>MicroRNAs</topic><topic>Mutation</topic><topic>Pancreas</topic><topic>Peripheral blood mononuclear cells</topic><topic>Plasma</topic><topic>Plasmas (physics)</topic><topic>Polymorphism</topic><topic>Pseudomonas aeruginosa</topic><topic>Respiratory function</topic><topic>Single-nucleotide polymorphism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ideozu, Justin E</creatorcontrib><creatorcontrib>Zhang, Xi</creatorcontrib><creatorcontrib>Pan, Amy</creatorcontrib><creatorcontrib>Ashrafi, Zainub</creatorcontrib><creatorcontrib>Woods, Katherine J</creatorcontrib><creatorcontrib>Hessner, Martin J</creatorcontrib><creatorcontrib>Simpson, Pippa</creatorcontrib><creatorcontrib>Levy, Hara</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>ProQuest Research Library</collection><collection>Research Library (Corporate)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>International journal of molecular sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ideozu, Justin E</au><au>Zhang, Xi</au><au>Pan, Amy</au><au>Ashrafi, Zainub</au><au>Woods, Katherine J</au><au>Hessner, Martin J</au><au>Simpson, Pippa</au><au>Levy, Hara</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Increased Expression of Plasma-Induced ABCC1 mRNA in Cystic Fibrosis</atitle><jtitle>International journal of molecular sciences</jtitle><addtitle>Int J Mol Sci</addtitle><date>2017-08-11</date><risdate>2017</risdate><volume>18</volume><issue>8</issue><spage>1752</spage><pages>1752-</pages><issn>1422-0067</issn><issn>1661-6596</issn><eissn>1422-0067</eissn><abstract>The
gene is structurally and functionally related to the cystic fibrosis transmembrane conductance regulator gene (
). Upregulation of
is thought to improve lung function in patients with cystic fibrosis (CF); the mechanism underlying this effect is unknown. We analyzed the
promoter single nucleotide polymorphism (SNP rs504348), plasma-induced
mRNA expression levels, and
methylation status and their correlation with clinical variables among CF subjects with differing
mutations. We assigned 93 CF subjects into disease severity groups and genotyped SNP rs504348. For 23 CF subjects and 7 healthy controls, donor peripheral blood mononuclear cells (PBMCs) stimulated with plasma underwent gene expression analysis via qRT-PCR.
promoter methylation was analyzed in the same 23 CF subjects. No significant correlation was observed between rs504348 genotypes and CF disease severity, but pancreatic insufficient CF subjects showed increased colonization with any form of
(OR = 3.125, 95% CI: 1.192-8.190) and mucoid
(OR = 5.075, 95% CI: 1.307-28.620) compared to the pancreatic sufficient group. A significantly higher expression of
mRNA was induced by CF plasma compared to healthy control plasma (
< 0.001). CF subjects with rs504348 (CC/CG) also had higher mRNA expression compared to those with the ancestral GG genotype (
< 0.005).
promoter was completely unmethylated; therefore, we did not detect any association between methylation and CF disease severity. In silico predictions suggested that histone modifications are crucial for regulating
expression in PBMCs. Our results suggest that
expression has a role in
activity thereby increasing our understanding of the molecular underpinnings of the clinical heterogeneity in CF.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>28800122</pmid><doi>10.3390/ijms18081752</doi><orcidid>https://orcid.org/0000-0002-3784-0711</orcidid><oa>free_for_read</oa></addata></record> |
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source | MDPI - Multidisciplinary Digital Publishing Institute; PubMed Central; EZB Electronic Journals Library |
subjects | Colonization Conductance Cystic fibrosis DNA methylation Gene expression Gene polymorphism Leukocytes (mononuclear) MicroRNAs Mutation Pancreas Peripheral blood mononuclear cells Plasma Plasmas (physics) Polymorphism Pseudomonas aeruginosa Respiratory function Single-nucleotide polymorphism |
title | Increased Expression of Plasma-Induced ABCC1 mRNA in Cystic Fibrosis |
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