R Loops and Links to Human Disease
Aberrant R-loop structures are increasingly being realized as an important contributor to human disease. R loops, which are mainly co-transcriptional, abundant RNA/DNA hybrids, form naturally and can indeed be beneficial for transcription regulation at certain loci. However, their unwanted persisten...
Gespeichert in:
Veröffentlicht in: | Journal of molecular biology 2017-10, Vol.429 (21), p.3168-3180 |
---|---|
Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 3180 |
---|---|
container_issue | 21 |
container_start_page | 3168 |
container_title | Journal of molecular biology |
container_volume | 429 |
creator | Richard, Patricia Manley, James L. |
description | Aberrant R-loop structures are increasingly being realized as an important contributor to human disease. R loops, which are mainly co-transcriptional, abundant RNA/DNA hybrids, form naturally and can indeed be beneficial for transcription regulation at certain loci. However, their unwanted persistence elsewhere or in particular situations can lead to DNA double-strand breaks, chromosome rearrangements, and hypermutation, which are all sources of genomic instability. Mutations in genes involved in R-loop resolution or mutations leading to R-loop formation at specific genes affect the normal physiology of the cell. We discuss here the examples of diseases for which a link with R loops has been described, as well as how disease-causing mutations might participate in the development and/or progression of diseases that include repeat-associated conditions, other neurological disorders, and cancers.
[Display omitted]
•R-loop resolution defects are found to be associated with an increasing number of diseases.•R-loop-dependent genomic instability appears to be a common denominator in many cancers and neurological disorders.•R loops likely trigger chromatin state changes at certain disease-associated genes. |
doi_str_mv | 10.1016/j.jmb.2016.08.031 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5478472</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0022283616303643</els_id><sourcerecordid>1859725864</sourcerecordid><originalsourceid>FETCH-LOGICAL-c451t-3c8511df6e444abaa3501f193406da44f1fe76da41eec06521643e87cce65b223</originalsourceid><addsrcrecordid>eNp9kE9r20AQxZfQUjtOP0AuQfSUi9SZ_ac1gUBwm7pgCJTmvKxXo3YdS-toZUO_fWTsmuSS0zyY994MP8YuEQoE1F9XxapZFnyQBZgCBJ6xMYKZ5kYL84GNATjPuRF6xM5TWgGAEtJ8YiNeagCJfMy-_MoWMW5S5toqW4T2KWV9zObbxrXZt5DIJbpgH2u3TvT5OCfs8f7779k8Xzz8-Dm7W-ReKuxz4Y1CrGpNUkq3dE4owBqnQoKunJQ11lTuFRJ50IqjloJM6T1pteRcTNjtoXezXTZUeWr7zq3tpguN6_7Z6IJ9u2nDX_sn7qySpZHlvuD6WNDF5y2l3jYheVqvXUtxmywaNS25MsPdCcOD1XcxpY7q0xkEu2drV3Zga_dsLRg7sB0yV6__OyX-wxwMNwcDDZR2gTqbfKDWUxU68r2tYnin_gUAP4hY</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1859725864</pqid></control><display><type>article</type><title>R Loops and Links to Human Disease</title><source>MEDLINE</source><source>Elsevier ScienceDirect Journals Complete</source><creator>Richard, Patricia ; Manley, James L.</creator><creatorcontrib>Richard, Patricia ; Manley, James L.</creatorcontrib><description>Aberrant R-loop structures are increasingly being realized as an important contributor to human disease. R loops, which are mainly co-transcriptional, abundant RNA/DNA hybrids, form naturally and can indeed be beneficial for transcription regulation at certain loci. However, their unwanted persistence elsewhere or in particular situations can lead to DNA double-strand breaks, chromosome rearrangements, and hypermutation, which are all sources of genomic instability. Mutations in genes involved in R-loop resolution or mutations leading to R-loop formation at specific genes affect the normal physiology of the cell. We discuss here the examples of diseases for which a link with R loops has been described, as well as how disease-causing mutations might participate in the development and/or progression of diseases that include repeat-associated conditions, other neurological disorders, and cancers.
[Display omitted]
•R-loop resolution defects are found to be associated with an increasing number of diseases.•R-loop-dependent genomic instability appears to be a common denominator in many cancers and neurological disorders.•R loops likely trigger chromatin state changes at certain disease-associated genes.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1016/j.jmb.2016.08.031</identifier><identifier>PMID: 27600412</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>chromatin reorganization ; Disease - genetics ; DNA Replication ; Gene Expression Regulation ; Genomic Instability ; human diseases ; Humans ; Nucleic Acid Conformation ; R loops ; transcription ; Transcription, Genetic</subject><ispartof>Journal of molecular biology, 2017-10, Vol.429 (21), p.3168-3180</ispartof><rights>2016</rights><rights>Copyright © 2016. Published by Elsevier Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c451t-3c8511df6e444abaa3501f193406da44f1fe76da41eec06521643e87cce65b223</citedby><cites>FETCH-LOGICAL-c451t-3c8511df6e444abaa3501f193406da44f1fe76da41eec06521643e87cce65b223</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.jmb.2016.08.031$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,780,784,885,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27600412$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Richard, Patricia</creatorcontrib><creatorcontrib>Manley, James L.</creatorcontrib><title>R Loops and Links to Human Disease</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>Aberrant R-loop structures are increasingly being realized as an important contributor to human disease. R loops, which are mainly co-transcriptional, abundant RNA/DNA hybrids, form naturally and can indeed be beneficial for transcription regulation at certain loci. However, their unwanted persistence elsewhere or in particular situations can lead to DNA double-strand breaks, chromosome rearrangements, and hypermutation, which are all sources of genomic instability. Mutations in genes involved in R-loop resolution or mutations leading to R-loop formation at specific genes affect the normal physiology of the cell. We discuss here the examples of diseases for which a link with R loops has been described, as well as how disease-causing mutations might participate in the development and/or progression of diseases that include repeat-associated conditions, other neurological disorders, and cancers.
[Display omitted]
•R-loop resolution defects are found to be associated with an increasing number of diseases.•R-loop-dependent genomic instability appears to be a common denominator in many cancers and neurological disorders.•R loops likely trigger chromatin state changes at certain disease-associated genes.</description><subject>chromatin reorganization</subject><subject>Disease - genetics</subject><subject>DNA Replication</subject><subject>Gene Expression Regulation</subject><subject>Genomic Instability</subject><subject>human diseases</subject><subject>Humans</subject><subject>Nucleic Acid Conformation</subject><subject>R loops</subject><subject>transcription</subject><subject>Transcription, Genetic</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kE9r20AQxZfQUjtOP0AuQfSUi9SZ_ac1gUBwm7pgCJTmvKxXo3YdS-toZUO_fWTsmuSS0zyY994MP8YuEQoE1F9XxapZFnyQBZgCBJ6xMYKZ5kYL84GNATjPuRF6xM5TWgGAEtJ8YiNeagCJfMy-_MoWMW5S5toqW4T2KWV9zObbxrXZt5DIJbpgH2u3TvT5OCfs8f7779k8Xzz8-Dm7W-ReKuxz4Y1CrGpNUkq3dE4owBqnQoKunJQ11lTuFRJ50IqjloJM6T1pteRcTNjtoXezXTZUeWr7zq3tpguN6_7Z6IJ9u2nDX_sn7qySpZHlvuD6WNDF5y2l3jYheVqvXUtxmywaNS25MsPdCcOD1XcxpY7q0xkEu2drV3Zga_dsLRg7sB0yV6__OyX-wxwMNwcDDZR2gTqbfKDWUxU68r2tYnin_gUAP4hY</recordid><startdate>20171027</startdate><enddate>20171027</enddate><creator>Richard, Patricia</creator><creator>Manley, James L.</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20171027</creationdate><title>R Loops and Links to Human Disease</title><author>Richard, Patricia ; Manley, James L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c451t-3c8511df6e444abaa3501f193406da44f1fe76da41eec06521643e87cce65b223</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>chromatin reorganization</topic><topic>Disease - genetics</topic><topic>DNA Replication</topic><topic>Gene Expression Regulation</topic><topic>Genomic Instability</topic><topic>human diseases</topic><topic>Humans</topic><topic>Nucleic Acid Conformation</topic><topic>R loops</topic><topic>transcription</topic><topic>Transcription, Genetic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Richard, Patricia</creatorcontrib><creatorcontrib>Manley, James L.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Richard, Patricia</au><au>Manley, James L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>R Loops and Links to Human Disease</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>2017-10-27</date><risdate>2017</risdate><volume>429</volume><issue>21</issue><spage>3168</spage><epage>3180</epage><pages>3168-3180</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><abstract>Aberrant R-loop structures are increasingly being realized as an important contributor to human disease. R loops, which are mainly co-transcriptional, abundant RNA/DNA hybrids, form naturally and can indeed be beneficial for transcription regulation at certain loci. However, their unwanted persistence elsewhere or in particular situations can lead to DNA double-strand breaks, chromosome rearrangements, and hypermutation, which are all sources of genomic instability. Mutations in genes involved in R-loop resolution or mutations leading to R-loop formation at specific genes affect the normal physiology of the cell. We discuss here the examples of diseases for which a link with R loops has been described, as well as how disease-causing mutations might participate in the development and/or progression of diseases that include repeat-associated conditions, other neurological disorders, and cancers.
[Display omitted]
•R-loop resolution defects are found to be associated with an increasing number of diseases.•R-loop-dependent genomic instability appears to be a common denominator in many cancers and neurological disorders.•R loops likely trigger chromatin state changes at certain disease-associated genes.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>27600412</pmid><doi>10.1016/j.jmb.2016.08.031</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0022-2836 |
ispartof | Journal of molecular biology, 2017-10, Vol.429 (21), p.3168-3180 |
issn | 0022-2836 1089-8638 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5478472 |
source | MEDLINE; Elsevier ScienceDirect Journals Complete |
subjects | chromatin reorganization Disease - genetics DNA Replication Gene Expression Regulation Genomic Instability human diseases Humans Nucleic Acid Conformation R loops transcription Transcription, Genetic |
title | R Loops and Links to Human Disease |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-04T17%3A36%3A30IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=R%20Loops%20and%20Links%20to%20Human%20Disease&rft.jtitle=Journal%20of%20molecular%20biology&rft.au=Richard,%20Patricia&rft.date=2017-10-27&rft.volume=429&rft.issue=21&rft.spage=3168&rft.epage=3180&rft.pages=3168-3180&rft.issn=0022-2836&rft.eissn=1089-8638&rft_id=info:doi/10.1016/j.jmb.2016.08.031&rft_dat=%3Cproquest_pubme%3E1859725864%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1859725864&rft_id=info:pmid/27600412&rft_els_id=S0022283616303643&rfr_iscdi=true |