Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories

To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was...

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Veröffentlicht in:Oncotarget 2017-05, Vol.8 (20), p.32608-32617
Hauptverfasser: Perricone, Margherita, Palandri, Francesca, Ottaviani, Emanuela, Angelini, Mario, Bagli, Laura, Bellesia, Enrica, Donati, Meris, Gemmati, Donato, Zucchini, Patrizia, Mancini, Stefania, Marchica, Valentina, Trubini, Serena, De Matteis, Giovanna, Di Zacomo, Silvia, Favarato, Mosè, Fioroni, Annamaria, Bolzonella, Caterina, Maccari, Giorgia, Navaglia, Filippo, Gatti, Daniela, Toffolatti, Luisa, Orlandi, Linda, Laloux, Vèronique, Manfrini, Marco, Galieni, Piero, Giannini, Barbara, Tieghi, Alessia, Barulli, Sara, Serino, Maria Luisa, Maccaferri, Monica, Scortechini, Anna Rita, Giuliani, Nicola, Vallisa, Daniele, Bonifacio, Massimiliano, Accorsi, Patrizia, Salbe, Cristina, Fazio, Vinicio, Gusella, Milena, Toffoletti, Eleonora, Salvucci, Marzia, Svaldi, Mirija, Gherlinzoni, Filippo, Cassavia, Francesca, Orsini, Francesco, Martinelli, Giovanni
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container_start_page 32608
container_title Oncotarget
container_volume 8
creator Perricone, Margherita
Palandri, Francesca
Ottaviani, Emanuela
Angelini, Mario
Bagli, Laura
Bellesia, Enrica
Donati, Meris
Gemmati, Donato
Zucchini, Patrizia
Mancini, Stefania
Marchica, Valentina
Trubini, Serena
De Matteis, Giovanna
Di Zacomo, Silvia
Favarato, Mosè
Fioroni, Annamaria
Bolzonella, Caterina
Maccari, Giorgia
Navaglia, Filippo
Gatti, Daniela
Toffolatti, Luisa
Orlandi, Linda
Laloux, Vèronique
Manfrini, Marco
Galieni, Piero
Giannini, Barbara
Tieghi, Alessia
Barulli, Sara
Serino, Maria Luisa
Maccaferri, Monica
Scortechini, Anna Rita
Giuliani, Nicola
Vallisa, Daniele
Bonifacio, Massimiliano
Accorsi, Patrizia
Salbe, Cristina
Fazio, Vinicio
Gusella, Milena
Toffoletti, Eleonora
Salvucci, Marzia
Svaldi, Mirija
Gherlinzoni, Filippo
Cassavia, Francesca
Orsini, Francesco
Martinelli, Giovanni
description To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB < 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F.
doi_str_mv 10.18632/oncotarget.15940
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Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB &lt; 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. 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Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB &lt; 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F.</description><subject>DNA Mutational Analysis - methods</subject><subject>DNA Mutational Analysis - standards</subject><subject>Humans</subject><subject>Italy</subject><subject>Janus Kinase 2 - genetics</subject><subject>Janus Kinase 2 - metabolism</subject><subject>Laboratories - standards</subject><subject>Laboratories - statistics &amp; numerical data</subject><subject>Mutation</subject><subject>Myeloproliferative Disorders - enzymology</subject><subject>Myeloproliferative Disorders - genetics</subject><subject>Observer Variation</subject><subject>Research Paper</subject><issn>1949-2553</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkc9O3DAQxq1KiEWUB-il8rGXpfG_xOZQaYWALkXqBbhG49hZXCX21uOslPfoAzeogMpc5jDz_T59M4R8YtU507XgX1PsUoG88-WcKSOrD-SEGWnWXCmxImeIv6qllGw0N8dkxbXkDRfihPzZIHrE0cdCU0_Lk6chFp8HsClDSXmmB8gBbBhCmSlER3OyE5a4qJ4Vt5sf_LFmzTUdpwIlpEgBEWa8oBuKZXLzAjyk4RDijgLtUsSUS5jGZzEzdFtgCBDpm2Hw-JEc9TCgP3vpp-Th-ur-8vv67ufN9nJzt94zU5d1pyoGkrslizaqs8oyUenauV4q3knNu95Jq41rJNPSNT1UzurKC-MbY7USp-TbP-5-sqN33XKEDEO7z2GEPLcJQvt-EsNTu0uHVslaaiYWwJcXQE6_J4-lHQN2fhgg-jRhy7RhjGvOm2X18_9ebyavrxB_AXY0j-A</recordid><startdate>20170516</startdate><enddate>20170516</enddate><creator>Perricone, Margherita</creator><creator>Palandri, Francesca</creator><creator>Ottaviani, Emanuela</creator><creator>Angelini, Mario</creator><creator>Bagli, Laura</creator><creator>Bellesia, Enrica</creator><creator>Donati, Meris</creator><creator>Gemmati, Donato</creator><creator>Zucchini, Patrizia</creator><creator>Mancini, Stefania</creator><creator>Marchica, Valentina</creator><creator>Trubini, Serena</creator><creator>De Matteis, Giovanna</creator><creator>Di Zacomo, Silvia</creator><creator>Favarato, Mosè</creator><creator>Fioroni, Annamaria</creator><creator>Bolzonella, Caterina</creator><creator>Maccari, Giorgia</creator><creator>Navaglia, Filippo</creator><creator>Gatti, Daniela</creator><creator>Toffolatti, Luisa</creator><creator>Orlandi, Linda</creator><creator>Laloux, Vèronique</creator><creator>Manfrini, Marco</creator><creator>Galieni, Piero</creator><creator>Giannini, Barbara</creator><creator>Tieghi, Alessia</creator><creator>Barulli, Sara</creator><creator>Serino, Maria Luisa</creator><creator>Maccaferri, Monica</creator><creator>Scortechini, Anna Rita</creator><creator>Giuliani, Nicola</creator><creator>Vallisa, Daniele</creator><creator>Bonifacio, Massimiliano</creator><creator>Accorsi, Patrizia</creator><creator>Salbe, Cristina</creator><creator>Fazio, Vinicio</creator><creator>Gusella, Milena</creator><creator>Toffoletti, Eleonora</creator><creator>Salvucci, Marzia</creator><creator>Svaldi, Mirija</creator><creator>Gherlinzoni, Filippo</creator><creator>Cassavia, Francesca</creator><creator>Orsini, Francesco</creator><creator>Martinelli, Giovanni</creator><general>Impact Journals LLC</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20170516</creationdate><title>Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories</title><author>Perricone, Margherita ; Palandri, Francesca ; Ottaviani, Emanuela ; Angelini, Mario ; Bagli, Laura ; Bellesia, Enrica ; Donati, Meris ; Gemmati, Donato ; Zucchini, Patrizia ; Mancini, Stefania ; Marchica, Valentina ; Trubini, Serena ; De Matteis, Giovanna ; Di Zacomo, Silvia ; Favarato, Mosè ; Fioroni, Annamaria ; Bolzonella, Caterina ; Maccari, Giorgia ; Navaglia, Filippo ; Gatti, Daniela ; Toffolatti, Luisa ; Orlandi, Linda ; Laloux, Vèronique ; Manfrini, Marco ; Galieni, Piero ; Giannini, Barbara ; Tieghi, Alessia ; Barulli, Sara ; Serino, Maria Luisa ; Maccaferri, Monica ; Scortechini, Anna Rita ; Giuliani, Nicola ; Vallisa, Daniele ; Bonifacio, Massimiliano ; Accorsi, Patrizia ; Salbe, Cristina ; Fazio, Vinicio ; Gusella, Milena ; Toffoletti, Eleonora ; Salvucci, Marzia ; Svaldi, Mirija ; Gherlinzoni, Filippo ; Cassavia, Francesca ; Orsini, Francesco ; Martinelli, Giovanni</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p196t-c501a42d427895cb5b13086ddf452c482cfd4b89d74184d7fa0db80e39e79b853</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>DNA Mutational Analysis - methods</topic><topic>DNA Mutational Analysis - standards</topic><topic>Humans</topic><topic>Italy</topic><topic>Janus Kinase 2 - genetics</topic><topic>Janus Kinase 2 - metabolism</topic><topic>Laboratories - standards</topic><topic>Laboratories - statistics &amp; numerical data</topic><topic>Mutation</topic><topic>Myeloproliferative Disorders - enzymology</topic><topic>Myeloproliferative Disorders - genetics</topic><topic>Observer Variation</topic><topic>Research Paper</topic><toplevel>online_resources</toplevel><creatorcontrib>Perricone, Margherita</creatorcontrib><creatorcontrib>Palandri, Francesca</creatorcontrib><creatorcontrib>Ottaviani, Emanuela</creatorcontrib><creatorcontrib>Angelini, Mario</creatorcontrib><creatorcontrib>Bagli, Laura</creatorcontrib><creatorcontrib>Bellesia, Enrica</creatorcontrib><creatorcontrib>Donati, Meris</creatorcontrib><creatorcontrib>Gemmati, Donato</creatorcontrib><creatorcontrib>Zucchini, Patrizia</creatorcontrib><creatorcontrib>Mancini, Stefania</creatorcontrib><creatorcontrib>Marchica, Valentina</creatorcontrib><creatorcontrib>Trubini, Serena</creatorcontrib><creatorcontrib>De Matteis, Giovanna</creatorcontrib><creatorcontrib>Di Zacomo, Silvia</creatorcontrib><creatorcontrib>Favarato, Mosè</creatorcontrib><creatorcontrib>Fioroni, Annamaria</creatorcontrib><creatorcontrib>Bolzonella, Caterina</creatorcontrib><creatorcontrib>Maccari, Giorgia</creatorcontrib><creatorcontrib>Navaglia, Filippo</creatorcontrib><creatorcontrib>Gatti, Daniela</creatorcontrib><creatorcontrib>Toffolatti, Luisa</creatorcontrib><creatorcontrib>Orlandi, Linda</creatorcontrib><creatorcontrib>Laloux, Vèronique</creatorcontrib><creatorcontrib>Manfrini, Marco</creatorcontrib><creatorcontrib>Galieni, Piero</creatorcontrib><creatorcontrib>Giannini, Barbara</creatorcontrib><creatorcontrib>Tieghi, Alessia</creatorcontrib><creatorcontrib>Barulli, Sara</creatorcontrib><creatorcontrib>Serino, Maria Luisa</creatorcontrib><creatorcontrib>Maccaferri, Monica</creatorcontrib><creatorcontrib>Scortechini, Anna Rita</creatorcontrib><creatorcontrib>Giuliani, Nicola</creatorcontrib><creatorcontrib>Vallisa, Daniele</creatorcontrib><creatorcontrib>Bonifacio, Massimiliano</creatorcontrib><creatorcontrib>Accorsi, Patrizia</creatorcontrib><creatorcontrib>Salbe, Cristina</creatorcontrib><creatorcontrib>Fazio, Vinicio</creatorcontrib><creatorcontrib>Gusella, Milena</creatorcontrib><creatorcontrib>Toffoletti, Eleonora</creatorcontrib><creatorcontrib>Salvucci, Marzia</creatorcontrib><creatorcontrib>Svaldi, Mirija</creatorcontrib><creatorcontrib>Gherlinzoni, Filippo</creatorcontrib><creatorcontrib>Cassavia, Francesca</creatorcontrib><creatorcontrib>Orsini, Francesco</creatorcontrib><creatorcontrib>Martinelli, Giovanni</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Oncotarget</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Perricone, Margherita</au><au>Palandri, Francesca</au><au>Ottaviani, Emanuela</au><au>Angelini, Mario</au><au>Bagli, Laura</au><au>Bellesia, Enrica</au><au>Donati, Meris</au><au>Gemmati, Donato</au><au>Zucchini, Patrizia</au><au>Mancini, Stefania</au><au>Marchica, Valentina</au><au>Trubini, Serena</au><au>De Matteis, Giovanna</au><au>Di Zacomo, Silvia</au><au>Favarato, Mosè</au><au>Fioroni, Annamaria</au><au>Bolzonella, Caterina</au><au>Maccari, Giorgia</au><au>Navaglia, Filippo</au><au>Gatti, Daniela</au><au>Toffolatti, Luisa</au><au>Orlandi, Linda</au><au>Laloux, Vèronique</au><au>Manfrini, Marco</au><au>Galieni, Piero</au><au>Giannini, Barbara</au><au>Tieghi, Alessia</au><au>Barulli, Sara</au><au>Serino, Maria Luisa</au><au>Maccaferri, Monica</au><au>Scortechini, Anna Rita</au><au>Giuliani, Nicola</au><au>Vallisa, Daniele</au><au>Bonifacio, Massimiliano</au><au>Accorsi, Patrizia</au><au>Salbe, Cristina</au><au>Fazio, Vinicio</au><au>Gusella, Milena</au><au>Toffoletti, Eleonora</au><au>Salvucci, Marzia</au><au>Svaldi, Mirija</au><au>Gherlinzoni, Filippo</au><au>Cassavia, Francesca</au><au>Orsini, Francesco</au><au>Martinelli, Giovanni</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories</atitle><jtitle>Oncotarget</jtitle><addtitle>Oncotarget</addtitle><date>2017-05-16</date><risdate>2017</risdate><volume>8</volume><issue>20</issue><spage>32608</spage><epage>32617</epage><pages>32608-32617</pages><eissn>1949-2553</eissn><abstract>To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB &lt; 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F.</abstract><cop>United States</cop><pub>Impact Journals LLC</pub><pmid>28427233</pmid><doi>10.18632/oncotarget.15940</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record>
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subjects DNA Mutational Analysis - methods
DNA Mutational Analysis - standards
Humans
Italy
Janus Kinase 2 - genetics
Janus Kinase 2 - metabolism
Laboratories - standards
Laboratories - statistics & numerical data
Mutation
Myeloproliferative Disorders - enzymology
Myeloproliferative Disorders - genetics
Observer Variation
Research Paper
title Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories
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