Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories
To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was...
Gespeichert in:
Veröffentlicht in: | Oncotarget 2017-05, Vol.8 (20), p.32608-32617 |
---|---|
Hauptverfasser: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 32617 |
---|---|
container_issue | 20 |
container_start_page | 32608 |
container_title | Oncotarget |
container_volume | 8 |
creator | Perricone, Margherita Palandri, Francesca Ottaviani, Emanuela Angelini, Mario Bagli, Laura Bellesia, Enrica Donati, Meris Gemmati, Donato Zucchini, Patrizia Mancini, Stefania Marchica, Valentina Trubini, Serena De Matteis, Giovanna Di Zacomo, Silvia Favarato, Mosè Fioroni, Annamaria Bolzonella, Caterina Maccari, Giorgia Navaglia, Filippo Gatti, Daniela Toffolatti, Luisa Orlandi, Linda Laloux, Vèronique Manfrini, Marco Galieni, Piero Giannini, Barbara Tieghi, Alessia Barulli, Sara Serino, Maria Luisa Maccaferri, Monica Scortechini, Anna Rita Giuliani, Nicola Vallisa, Daniele Bonifacio, Massimiliano Accorsi, Patrizia Salbe, Cristina Fazio, Vinicio Gusella, Milena Toffoletti, Eleonora Salvucci, Marzia Svaldi, Mirija Gherlinzoni, Filippo Cassavia, Francesca Orsini, Francesco Martinelli, Giovanni |
description | To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB < 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F. |
doi_str_mv | 10.18632/oncotarget.15940 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5464813</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1891128227</sourcerecordid><originalsourceid>FETCH-LOGICAL-p196t-c501a42d427895cb5b13086ddf452c482cfd4b89d74184d7fa0db80e39e79b853</originalsourceid><addsrcrecordid>eNpVkc9O3DAQxq1KiEWUB-il8rGXpfG_xOZQaYWALkXqBbhG49hZXCX21uOslPfoAzeogMpc5jDz_T59M4R8YtU507XgX1PsUoG88-WcKSOrD-SEGWnWXCmxImeIv6qllGw0N8dkxbXkDRfihPzZIHrE0cdCU0_Lk6chFp8HsClDSXmmB8gBbBhCmSlER3OyE5a4qJ4Vt5sf_LFmzTUdpwIlpEgBEWa8oBuKZXLzAjyk4RDijgLtUsSUS5jGZzEzdFtgCBDpm2Hw-JEc9TCgP3vpp-Th-ur-8vv67ufN9nJzt94zU5d1pyoGkrslizaqs8oyUenauV4q3knNu95Jq41rJNPSNT1UzurKC-MbY7USp-TbP-5-sqN33XKEDEO7z2GEPLcJQvt-EsNTu0uHVslaaiYWwJcXQE6_J4-lHQN2fhgg-jRhy7RhjGvOm2X18_9ebyavrxB_AXY0j-A</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1891128227</pqid></control><display><type>article</type><title>Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories</title><source>PubMed Central Free</source><source>MEDLINE</source><source>Free E- Journals</source><source>EZB Electronic Journals Library</source><source>PubMed Central Open Access</source><creator>Perricone, Margherita ; Palandri, Francesca ; Ottaviani, Emanuela ; Angelini, Mario ; Bagli, Laura ; Bellesia, Enrica ; Donati, Meris ; Gemmati, Donato ; Zucchini, Patrizia ; Mancini, Stefania ; Marchica, Valentina ; Trubini, Serena ; De Matteis, Giovanna ; Di Zacomo, Silvia ; Favarato, Mosè ; Fioroni, Annamaria ; Bolzonella, Caterina ; Maccari, Giorgia ; Navaglia, Filippo ; Gatti, Daniela ; Toffolatti, Luisa ; Orlandi, Linda ; Laloux, Vèronique ; Manfrini, Marco ; Galieni, Piero ; Giannini, Barbara ; Tieghi, Alessia ; Barulli, Sara ; Serino, Maria Luisa ; Maccaferri, Monica ; Scortechini, Anna Rita ; Giuliani, Nicola ; Vallisa, Daniele ; Bonifacio, Massimiliano ; Accorsi, Patrizia ; Salbe, Cristina ; Fazio, Vinicio ; Gusella, Milena ; Toffoletti, Eleonora ; Salvucci, Marzia ; Svaldi, Mirija ; Gherlinzoni, Filippo ; Cassavia, Francesca ; Orsini, Francesco ; Martinelli, Giovanni</creator><creatorcontrib>Perricone, Margherita ; Palandri, Francesca ; Ottaviani, Emanuela ; Angelini, Mario ; Bagli, Laura ; Bellesia, Enrica ; Donati, Meris ; Gemmati, Donato ; Zucchini, Patrizia ; Mancini, Stefania ; Marchica, Valentina ; Trubini, Serena ; De Matteis, Giovanna ; Di Zacomo, Silvia ; Favarato, Mosè ; Fioroni, Annamaria ; Bolzonella, Caterina ; Maccari, Giorgia ; Navaglia, Filippo ; Gatti, Daniela ; Toffolatti, Luisa ; Orlandi, Linda ; Laloux, Vèronique ; Manfrini, Marco ; Galieni, Piero ; Giannini, Barbara ; Tieghi, Alessia ; Barulli, Sara ; Serino, Maria Luisa ; Maccaferri, Monica ; Scortechini, Anna Rita ; Giuliani, Nicola ; Vallisa, Daniele ; Bonifacio, Massimiliano ; Accorsi, Patrizia ; Salbe, Cristina ; Fazio, Vinicio ; Gusella, Milena ; Toffoletti, Eleonora ; Salvucci, Marzia ; Svaldi, Mirija ; Gherlinzoni, Filippo ; Cassavia, Francesca ; Orsini, Francesco ; Martinelli, Giovanni</creatorcontrib><description>To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB < 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F.</description><identifier>EISSN: 1949-2553</identifier><identifier>DOI: 10.18632/oncotarget.15940</identifier><identifier>PMID: 28427233</identifier><language>eng</language><publisher>United States: Impact Journals LLC</publisher><subject>DNA Mutational Analysis - methods ; DNA Mutational Analysis - standards ; Humans ; Italy ; Janus Kinase 2 - genetics ; Janus Kinase 2 - metabolism ; Laboratories - standards ; Laboratories - statistics & numerical data ; Mutation ; Myeloproliferative Disorders - enzymology ; Myeloproliferative Disorders - genetics ; Observer Variation ; Research Paper</subject><ispartof>Oncotarget, 2017-05, Vol.8 (20), p.32608-32617</ispartof><rights>Copyright: © 2017 Perricone et al. 2017</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5464813/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5464813/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28427233$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Perricone, Margherita</creatorcontrib><creatorcontrib>Palandri, Francesca</creatorcontrib><creatorcontrib>Ottaviani, Emanuela</creatorcontrib><creatorcontrib>Angelini, Mario</creatorcontrib><creatorcontrib>Bagli, Laura</creatorcontrib><creatorcontrib>Bellesia, Enrica</creatorcontrib><creatorcontrib>Donati, Meris</creatorcontrib><creatorcontrib>Gemmati, Donato</creatorcontrib><creatorcontrib>Zucchini, Patrizia</creatorcontrib><creatorcontrib>Mancini, Stefania</creatorcontrib><creatorcontrib>Marchica, Valentina</creatorcontrib><creatorcontrib>Trubini, Serena</creatorcontrib><creatorcontrib>De Matteis, Giovanna</creatorcontrib><creatorcontrib>Di Zacomo, Silvia</creatorcontrib><creatorcontrib>Favarato, Mosè</creatorcontrib><creatorcontrib>Fioroni, Annamaria</creatorcontrib><creatorcontrib>Bolzonella, Caterina</creatorcontrib><creatorcontrib>Maccari, Giorgia</creatorcontrib><creatorcontrib>Navaglia, Filippo</creatorcontrib><creatorcontrib>Gatti, Daniela</creatorcontrib><creatorcontrib>Toffolatti, Luisa</creatorcontrib><creatorcontrib>Orlandi, Linda</creatorcontrib><creatorcontrib>Laloux, Vèronique</creatorcontrib><creatorcontrib>Manfrini, Marco</creatorcontrib><creatorcontrib>Galieni, Piero</creatorcontrib><creatorcontrib>Giannini, Barbara</creatorcontrib><creatorcontrib>Tieghi, Alessia</creatorcontrib><creatorcontrib>Barulli, Sara</creatorcontrib><creatorcontrib>Serino, Maria Luisa</creatorcontrib><creatorcontrib>Maccaferri, Monica</creatorcontrib><creatorcontrib>Scortechini, Anna Rita</creatorcontrib><creatorcontrib>Giuliani, Nicola</creatorcontrib><creatorcontrib>Vallisa, Daniele</creatorcontrib><creatorcontrib>Bonifacio, Massimiliano</creatorcontrib><creatorcontrib>Accorsi, Patrizia</creatorcontrib><creatorcontrib>Salbe, Cristina</creatorcontrib><creatorcontrib>Fazio, Vinicio</creatorcontrib><creatorcontrib>Gusella, Milena</creatorcontrib><creatorcontrib>Toffoletti, Eleonora</creatorcontrib><creatorcontrib>Salvucci, Marzia</creatorcontrib><creatorcontrib>Svaldi, Mirija</creatorcontrib><creatorcontrib>Gherlinzoni, Filippo</creatorcontrib><creatorcontrib>Cassavia, Francesca</creatorcontrib><creatorcontrib>Orsini, Francesco</creatorcontrib><creatorcontrib>Martinelli, Giovanni</creatorcontrib><title>Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories</title><title>Oncotarget</title><addtitle>Oncotarget</addtitle><description>To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB < 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F.</description><subject>DNA Mutational Analysis - methods</subject><subject>DNA Mutational Analysis - standards</subject><subject>Humans</subject><subject>Italy</subject><subject>Janus Kinase 2 - genetics</subject><subject>Janus Kinase 2 - metabolism</subject><subject>Laboratories - standards</subject><subject>Laboratories - statistics & numerical data</subject><subject>Mutation</subject><subject>Myeloproliferative Disorders - enzymology</subject><subject>Myeloproliferative Disorders - genetics</subject><subject>Observer Variation</subject><subject>Research Paper</subject><issn>1949-2553</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkc9O3DAQxq1KiEWUB-il8rGXpfG_xOZQaYWALkXqBbhG49hZXCX21uOslPfoAzeogMpc5jDz_T59M4R8YtU507XgX1PsUoG88-WcKSOrD-SEGWnWXCmxImeIv6qllGw0N8dkxbXkDRfihPzZIHrE0cdCU0_Lk6chFp8HsClDSXmmB8gBbBhCmSlER3OyE5a4qJ4Vt5sf_LFmzTUdpwIlpEgBEWa8oBuKZXLzAjyk4RDijgLtUsSUS5jGZzEzdFtgCBDpm2Hw-JEc9TCgP3vpp-Th-ur-8vv67ufN9nJzt94zU5d1pyoGkrslizaqs8oyUenauV4q3knNu95Jq41rJNPSNT1UzurKC-MbY7USp-TbP-5-sqN33XKEDEO7z2GEPLcJQvt-EsNTu0uHVslaaiYWwJcXQE6_J4-lHQN2fhgg-jRhy7RhjGvOm2X18_9ebyavrxB_AXY0j-A</recordid><startdate>20170516</startdate><enddate>20170516</enddate><creator>Perricone, Margherita</creator><creator>Palandri, Francesca</creator><creator>Ottaviani, Emanuela</creator><creator>Angelini, Mario</creator><creator>Bagli, Laura</creator><creator>Bellesia, Enrica</creator><creator>Donati, Meris</creator><creator>Gemmati, Donato</creator><creator>Zucchini, Patrizia</creator><creator>Mancini, Stefania</creator><creator>Marchica, Valentina</creator><creator>Trubini, Serena</creator><creator>De Matteis, Giovanna</creator><creator>Di Zacomo, Silvia</creator><creator>Favarato, Mosè</creator><creator>Fioroni, Annamaria</creator><creator>Bolzonella, Caterina</creator><creator>Maccari, Giorgia</creator><creator>Navaglia, Filippo</creator><creator>Gatti, Daniela</creator><creator>Toffolatti, Luisa</creator><creator>Orlandi, Linda</creator><creator>Laloux, Vèronique</creator><creator>Manfrini, Marco</creator><creator>Galieni, Piero</creator><creator>Giannini, Barbara</creator><creator>Tieghi, Alessia</creator><creator>Barulli, Sara</creator><creator>Serino, Maria Luisa</creator><creator>Maccaferri, Monica</creator><creator>Scortechini, Anna Rita</creator><creator>Giuliani, Nicola</creator><creator>Vallisa, Daniele</creator><creator>Bonifacio, Massimiliano</creator><creator>Accorsi, Patrizia</creator><creator>Salbe, Cristina</creator><creator>Fazio, Vinicio</creator><creator>Gusella, Milena</creator><creator>Toffoletti, Eleonora</creator><creator>Salvucci, Marzia</creator><creator>Svaldi, Mirija</creator><creator>Gherlinzoni, Filippo</creator><creator>Cassavia, Francesca</creator><creator>Orsini, Francesco</creator><creator>Martinelli, Giovanni</creator><general>Impact Journals LLC</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20170516</creationdate><title>Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories</title><author>Perricone, Margherita ; Palandri, Francesca ; Ottaviani, Emanuela ; Angelini, Mario ; Bagli, Laura ; Bellesia, Enrica ; Donati, Meris ; Gemmati, Donato ; Zucchini, Patrizia ; Mancini, Stefania ; Marchica, Valentina ; Trubini, Serena ; De Matteis, Giovanna ; Di Zacomo, Silvia ; Favarato, Mosè ; Fioroni, Annamaria ; Bolzonella, Caterina ; Maccari, Giorgia ; Navaglia, Filippo ; Gatti, Daniela ; Toffolatti, Luisa ; Orlandi, Linda ; Laloux, Vèronique ; Manfrini, Marco ; Galieni, Piero ; Giannini, Barbara ; Tieghi, Alessia ; Barulli, Sara ; Serino, Maria Luisa ; Maccaferri, Monica ; Scortechini, Anna Rita ; Giuliani, Nicola ; Vallisa, Daniele ; Bonifacio, Massimiliano ; Accorsi, Patrizia ; Salbe, Cristina ; Fazio, Vinicio ; Gusella, Milena ; Toffoletti, Eleonora ; Salvucci, Marzia ; Svaldi, Mirija ; Gherlinzoni, Filippo ; Cassavia, Francesca ; Orsini, Francesco ; Martinelli, Giovanni</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p196t-c501a42d427895cb5b13086ddf452c482cfd4b89d74184d7fa0db80e39e79b853</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>DNA Mutational Analysis - methods</topic><topic>DNA Mutational Analysis - standards</topic><topic>Humans</topic><topic>Italy</topic><topic>Janus Kinase 2 - genetics</topic><topic>Janus Kinase 2 - metabolism</topic><topic>Laboratories - standards</topic><topic>Laboratories - statistics & numerical data</topic><topic>Mutation</topic><topic>Myeloproliferative Disorders - enzymology</topic><topic>Myeloproliferative Disorders - genetics</topic><topic>Observer Variation</topic><topic>Research Paper</topic><toplevel>online_resources</toplevel><creatorcontrib>Perricone, Margherita</creatorcontrib><creatorcontrib>Palandri, Francesca</creatorcontrib><creatorcontrib>Ottaviani, Emanuela</creatorcontrib><creatorcontrib>Angelini, Mario</creatorcontrib><creatorcontrib>Bagli, Laura</creatorcontrib><creatorcontrib>Bellesia, Enrica</creatorcontrib><creatorcontrib>Donati, Meris</creatorcontrib><creatorcontrib>Gemmati, Donato</creatorcontrib><creatorcontrib>Zucchini, Patrizia</creatorcontrib><creatorcontrib>Mancini, Stefania</creatorcontrib><creatorcontrib>Marchica, Valentina</creatorcontrib><creatorcontrib>Trubini, Serena</creatorcontrib><creatorcontrib>De Matteis, Giovanna</creatorcontrib><creatorcontrib>Di Zacomo, Silvia</creatorcontrib><creatorcontrib>Favarato, Mosè</creatorcontrib><creatorcontrib>Fioroni, Annamaria</creatorcontrib><creatorcontrib>Bolzonella, Caterina</creatorcontrib><creatorcontrib>Maccari, Giorgia</creatorcontrib><creatorcontrib>Navaglia, Filippo</creatorcontrib><creatorcontrib>Gatti, Daniela</creatorcontrib><creatorcontrib>Toffolatti, Luisa</creatorcontrib><creatorcontrib>Orlandi, Linda</creatorcontrib><creatorcontrib>Laloux, Vèronique</creatorcontrib><creatorcontrib>Manfrini, Marco</creatorcontrib><creatorcontrib>Galieni, Piero</creatorcontrib><creatorcontrib>Giannini, Barbara</creatorcontrib><creatorcontrib>Tieghi, Alessia</creatorcontrib><creatorcontrib>Barulli, Sara</creatorcontrib><creatorcontrib>Serino, Maria Luisa</creatorcontrib><creatorcontrib>Maccaferri, Monica</creatorcontrib><creatorcontrib>Scortechini, Anna Rita</creatorcontrib><creatorcontrib>Giuliani, Nicola</creatorcontrib><creatorcontrib>Vallisa, Daniele</creatorcontrib><creatorcontrib>Bonifacio, Massimiliano</creatorcontrib><creatorcontrib>Accorsi, Patrizia</creatorcontrib><creatorcontrib>Salbe, Cristina</creatorcontrib><creatorcontrib>Fazio, Vinicio</creatorcontrib><creatorcontrib>Gusella, Milena</creatorcontrib><creatorcontrib>Toffoletti, Eleonora</creatorcontrib><creatorcontrib>Salvucci, Marzia</creatorcontrib><creatorcontrib>Svaldi, Mirija</creatorcontrib><creatorcontrib>Gherlinzoni, Filippo</creatorcontrib><creatorcontrib>Cassavia, Francesca</creatorcontrib><creatorcontrib>Orsini, Francesco</creatorcontrib><creatorcontrib>Martinelli, Giovanni</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Oncotarget</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Perricone, Margherita</au><au>Palandri, Francesca</au><au>Ottaviani, Emanuela</au><au>Angelini, Mario</au><au>Bagli, Laura</au><au>Bellesia, Enrica</au><au>Donati, Meris</au><au>Gemmati, Donato</au><au>Zucchini, Patrizia</au><au>Mancini, Stefania</au><au>Marchica, Valentina</au><au>Trubini, Serena</au><au>De Matteis, Giovanna</au><au>Di Zacomo, Silvia</au><au>Favarato, Mosè</au><au>Fioroni, Annamaria</au><au>Bolzonella, Caterina</au><au>Maccari, Giorgia</au><au>Navaglia, Filippo</au><au>Gatti, Daniela</au><au>Toffolatti, Luisa</au><au>Orlandi, Linda</au><au>Laloux, Vèronique</au><au>Manfrini, Marco</au><au>Galieni, Piero</au><au>Giannini, Barbara</au><au>Tieghi, Alessia</au><au>Barulli, Sara</au><au>Serino, Maria Luisa</au><au>Maccaferri, Monica</au><au>Scortechini, Anna Rita</au><au>Giuliani, Nicola</au><au>Vallisa, Daniele</au><au>Bonifacio, Massimiliano</au><au>Accorsi, Patrizia</au><au>Salbe, Cristina</au><au>Fazio, Vinicio</au><au>Gusella, Milena</au><au>Toffoletti, Eleonora</au><au>Salvucci, Marzia</au><au>Svaldi, Mirija</au><au>Gherlinzoni, Filippo</au><au>Cassavia, Francesca</au><au>Orsini, Francesco</au><au>Martinelli, Giovanni</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories</atitle><jtitle>Oncotarget</jtitle><addtitle>Oncotarget</addtitle><date>2017-05-16</date><risdate>2017</risdate><volume>8</volume><issue>20</issue><spage>32608</spage><epage>32617</epage><pages>32608-32617</pages><eissn>1949-2553</eissn><abstract>To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB < 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F.</abstract><cop>United States</cop><pub>Impact Journals LLC</pub><pmid>28427233</pmid><doi>10.18632/oncotarget.15940</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | EISSN: 1949-2553 |
ispartof | Oncotarget, 2017-05, Vol.8 (20), p.32608-32617 |
issn | 1949-2553 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_5464813 |
source | PubMed Central Free; MEDLINE; Free E- Journals; EZB Electronic Journals Library; PubMed Central Open Access |
subjects | DNA Mutational Analysis - methods DNA Mutational Analysis - standards Humans Italy Janus Kinase 2 - genetics Janus Kinase 2 - metabolism Laboratories - standards Laboratories - statistics & numerical data Mutation Myeloproliferative Disorders - enzymology Myeloproliferative Disorders - genetics Observer Variation Research Paper |
title | Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-03T14%3A10%3A40IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Assessment%20of%20the%20interlaboratory%20variability%20and%20robustness%20of%20JAK2V617F%20mutation%20assays:%20A%20study%20involving%20a%20consortium%20of%2019%20Italian%20laboratories&rft.jtitle=Oncotarget&rft.au=Perricone,%20Margherita&rft.date=2017-05-16&rft.volume=8&rft.issue=20&rft.spage=32608&rft.epage=32617&rft.pages=32608-32617&rft.eissn=1949-2553&rft_id=info:doi/10.18632/oncotarget.15940&rft_dat=%3Cproquest_pubme%3E1891128227%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1891128227&rft_id=info:pmid/28427233&rfr_iscdi=true |