Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar
Biochar, in addition to sequestering carbon, ameliorating soil, and improving plant performance, can impact foliar and soilborne plant diseases. Nevertheless, the mechanisms associated with suppression of soilborne diseases and improved plant performances are not well understood. This study is desig...
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| Veröffentlicht in: | Scientific reports 2017-03, Vol.7 (1), p.44382-44382, Article 44382 |
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| creator | Jaiswal, Amit K. Elad, Yigal Paudel, Indira Graber, Ellen R. Cytryn, Eddie Frenkel, Omer |
| description | Biochar, in addition to sequestering carbon, ameliorating soil, and improving plant performance, can impact foliar and soilborne plant diseases. Nevertheless, the mechanisms associated with suppression of soilborne diseases and improved plant performances are not well understood. This study is designed to establish the relationships between biochar-induced changes in rhizosphere microbial community structure, taxonomic and functional diversity, and activity with soilborne disease suppression and enhanced plant performance in a comprehensive fashion. Biochar suppressed Fusarium crown and root-rot of tomato and simultaneously improved tomato plant growth and physiological parameters. Furthermore, biochar reduced Fusarium root colonization and survival in soil, and increased the culturable counts of several biocontrol and plant growth promoting microorganisms. Illumina sequencing analyses of 16S rRNA gene revealed substantial differences in rhizosphere bacterial taxonomical composition between biochar-amended and non-amended treatments. Moreover, biochar amendment caused a significant increase in microbial taxonomic and functional diversity, microbial activities and an overall shift in carbon-source utilization. High microbial taxonomic and functional diversity and activity in the rhizosphere has been previously associated with suppression of diseases caused by soilborne pathogens and with plant growth promotion, and may collectively explain the significant reduction of disease and improvement in plant performance observed in the presence of biochar. |
| doi_str_mv | 10.1038/srep44382 |
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Nevertheless, the mechanisms associated with suppression of soilborne diseases and improved plant performances are not well understood. This study is designed to establish the relationships between biochar-induced changes in rhizosphere microbial community structure, taxonomic and functional diversity, and activity with soilborne disease suppression and enhanced plant performance in a comprehensive fashion. Biochar suppressed Fusarium crown and root-rot of tomato and simultaneously improved tomato plant growth and physiological parameters. Furthermore, biochar reduced Fusarium root colonization and survival in soil, and increased the culturable counts of several biocontrol and plant growth promoting microorganisms. Illumina sequencing analyses of 16S rRNA gene revealed substantial differences in rhizosphere bacterial taxonomical composition between biochar-amended and non-amended treatments. Moreover, biochar amendment caused a significant increase in microbial taxonomic and functional diversity, microbial activities and an overall shift in carbon-source utilization. High microbial taxonomic and functional diversity and activity in the rhizosphere has been previously associated with suppression of diseases caused by soilborne pathogens and with plant growth promotion, and may collectively explain the significant reduction of disease and improvement in plant performance observed in the presence of biochar.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/srep44382</identifier><identifier>PMID: 28287177</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>45/23 ; 631/326/171/1818 ; 631/326/2522 ; Bacteria - classification ; Bacteria - drug effects ; Bacteria - genetics ; Bacteria - growth & development ; Biological control ; Carbon sequestration ; Charcoal ; Charcoal - pharmacology ; Colonization ; Community structure ; Fertilizers ; Fungi - classification ; Fungi - drug effects ; Fungi - genetics ; Fungi - growth & development ; Fusarium - drug effects ; Fusarium - growth & development ; Fusarium - pathogenicity ; High-Throughput Nucleotide Sequencing ; Humanities and Social Sciences ; Microbial Consortia - drug effects ; Microbial Consortia - genetics ; Microorganisms ; multidisciplinary ; Plant diseases ; Plant Diseases - prevention & control ; Plant growth ; Rhizosphere ; RNA, Ribosomal, 16S - genetics ; Rot ; rRNA 16S ; Science ; Soil - chemistry ; Soil Microbiology ; Soil-borne diseases ; Soils ; Solanum lycopersicum - drug effects ; Solanum lycopersicum - growth & development ; Solanum lycopersicum - microbiology ; Taxonomy ; Tomatoes</subject><ispartof>Scientific reports, 2017-03, Vol.7 (1), p.44382-44382, Article 44382</ispartof><rights>The Author(s) 2017</rights><rights>Copyright Nature Publishing Group Mar 2017</rights><rights>Copyright © 2017, The Author(s) 2017 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c438t-50c37b8150f9447068b864bee691ad18df122448024b13e6b364a2cc8be6a0ea3</citedby><cites>FETCH-LOGICAL-c438t-50c37b8150f9447068b864bee691ad18df122448024b13e6b364a2cc8be6a0ea3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5347032/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5347032/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27923,27924,41119,42188,51575,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28287177$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jaiswal, Amit K.</creatorcontrib><creatorcontrib>Elad, Yigal</creatorcontrib><creatorcontrib>Paudel, Indira</creatorcontrib><creatorcontrib>Graber, Ellen R.</creatorcontrib><creatorcontrib>Cytryn, Eddie</creatorcontrib><creatorcontrib>Frenkel, Omer</creatorcontrib><title>Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>Biochar, in addition to sequestering carbon, ameliorating soil, and improving plant performance, can impact foliar and soilborne plant diseases. Nevertheless, the mechanisms associated with suppression of soilborne diseases and improved plant performances are not well understood. This study is designed to establish the relationships between biochar-induced changes in rhizosphere microbial community structure, taxonomic and functional diversity, and activity with soilborne disease suppression and enhanced plant performance in a comprehensive fashion. Biochar suppressed Fusarium crown and root-rot of tomato and simultaneously improved tomato plant growth and physiological parameters. Furthermore, biochar reduced Fusarium root colonization and survival in soil, and increased the culturable counts of several biocontrol and plant growth promoting microorganisms. Illumina sequencing analyses of 16S rRNA gene revealed substantial differences in rhizosphere bacterial taxonomical composition between biochar-amended and non-amended treatments. Moreover, biochar amendment caused a significant increase in microbial taxonomic and functional diversity, microbial activities and an overall shift in carbon-source utilization. High microbial taxonomic and functional diversity and activity in the rhizosphere has been previously associated with suppression of diseases caused by soilborne pathogens and with plant growth promotion, and may collectively explain the significant reduction of disease and improvement in plant performance observed in the presence of biochar.</description><subject>45/23</subject><subject>631/326/171/1818</subject><subject>631/326/2522</subject><subject>Bacteria - classification</subject><subject>Bacteria - drug effects</subject><subject>Bacteria - genetics</subject><subject>Bacteria - growth & development</subject><subject>Biological control</subject><subject>Carbon sequestration</subject><subject>Charcoal</subject><subject>Charcoal - pharmacology</subject><subject>Colonization</subject><subject>Community structure</subject><subject>Fertilizers</subject><subject>Fungi - classification</subject><subject>Fungi - drug effects</subject><subject>Fungi - genetics</subject><subject>Fungi - growth & development</subject><subject>Fusarium - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Scientific reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jaiswal, Amit K.</au><au>Elad, Yigal</au><au>Paudel, Indira</au><au>Graber, Ellen R.</au><au>Cytryn, Eddie</au><au>Frenkel, Omer</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar</atitle><jtitle>Scientific reports</jtitle><stitle>Sci Rep</stitle><addtitle>Sci Rep</addtitle><date>2017-03-13</date><risdate>2017</risdate><volume>7</volume><issue>1</issue><spage>44382</spage><epage>44382</epage><pages>44382-44382</pages><artnum>44382</artnum><issn>2045-2322</issn><eissn>2045-2322</eissn><abstract>Biochar, in addition to sequestering carbon, ameliorating soil, and improving plant performance, can impact foliar and soilborne plant diseases. Nevertheless, the mechanisms associated with suppression of soilborne diseases and improved plant performances are not well understood. This study is designed to establish the relationships between biochar-induced changes in rhizosphere microbial community structure, taxonomic and functional diversity, and activity with soilborne disease suppression and enhanced plant performance in a comprehensive fashion. Biochar suppressed Fusarium crown and root-rot of tomato and simultaneously improved tomato plant growth and physiological parameters. Furthermore, biochar reduced Fusarium root colonization and survival in soil, and increased the culturable counts of several biocontrol and plant growth promoting microorganisms. Illumina sequencing analyses of 16S rRNA gene revealed substantial differences in rhizosphere bacterial taxonomical composition between biochar-amended and non-amended treatments. Moreover, biochar amendment caused a significant increase in microbial taxonomic and functional diversity, microbial activities and an overall shift in carbon-source utilization. High microbial taxonomic and functional diversity and activity in the rhizosphere has been previously associated with suppression of diseases caused by soilborne pathogens and with plant growth promotion, and may collectively explain the significant reduction of disease and improvement in plant performance observed in the presence of biochar.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>28287177</pmid><doi>10.1038/srep44382</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | 45/23 631/326/171/1818 631/326/2522 Bacteria - classification Bacteria - drug effects Bacteria - genetics Bacteria - growth & development Biological control Carbon sequestration Charcoal Charcoal - pharmacology Colonization Community structure Fertilizers Fungi - classification Fungi - drug effects Fungi - genetics Fungi - growth & development Fusarium - drug effects Fusarium - growth & development Fusarium - pathogenicity High-Throughput Nucleotide Sequencing Humanities and Social Sciences Microbial Consortia - drug effects Microbial Consortia - genetics Microorganisms multidisciplinary Plant diseases Plant Diseases - prevention & control Plant growth Rhizosphere RNA, Ribosomal, 16S - genetics Rot rRNA 16S Science Soil - chemistry Soil Microbiology Soil-borne diseases Soils Solanum lycopersicum - drug effects Solanum lycopersicum - growth & development Solanum lycopersicum - microbiology Taxonomy Tomatoes |
| title | Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar |
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