Shrimp AHPND-causing plasmids encoding the PirAB toxins as mediated by pirAB-Tn903 are prevalent in various Vibrio species
Acute hepatopancreatic necrosis disease (AHPND) is a newly emerging shrimp disease caused by pirAB toxins encoded by a plasmid found in Vibrio parahaemolyticus . The pirAB toxins are the homologs of the Photorhabdus insect-related (Pir) toxins. Here, we report the complete sequences of the AHPND-cau...
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creator | Xiao, Jinzhou Liu, Liyuan Ke, Yiyun Li, Xiefei Liu, Yunfei Pan, Yingjie Yan, Shuling Wang, Yongjie |
description | Acute hepatopancreatic necrosis disease (AHPND) is a newly emerging shrimp disease caused by
pirAB
toxins encoded by a plasmid found in
Vibrio parahaemolyticus
. The
pirAB
toxins are the homologs of the
Photorhabdus
insect-related (Pir) toxins. Here, we report the complete sequences of the AHPND-causing plasmid isolated from
V. owensii
, as well as those of its 11 siblings (pVH family). In addition, we also included 13 related plasmids (pVH-r family) without the
pirAB
genes isolated from a variety of species within the
Vibrio
Harveyi clade. Furthermore, the
pirAB
-Tn903 composite transposon was identified in pVH, and both ends of the transposon appeared to have inserted simultaneously into the ancestor plasmid at different sites. The homologue counterparts of
pirAB
were also detected in a non-pVH plasmid in
V. campbellii
. Taken together, our results provide novel insights into the acquisition and evolution of
pirAB
as well as related plasmids in the
Vibrio
Harveyi clade. |
doi_str_mv | 10.1038/srep42177 |
format | Article |
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pirAB
toxins encoded by a plasmid found in
Vibrio parahaemolyticus
. The
pirAB
toxins are the homologs of the
Photorhabdus
insect-related (Pir) toxins. Here, we report the complete sequences of the AHPND-causing plasmid isolated from
V. owensii
, as well as those of its 11 siblings (pVH family). In addition, we also included 13 related plasmids (pVH-r family) without the
pirAB
genes isolated from a variety of species within the
Vibrio
Harveyi clade. Furthermore, the
pirAB
-Tn903 composite transposon was identified in pVH, and both ends of the transposon appeared to have inserted simultaneously into the ancestor plasmid at different sites. The homologue counterparts of
pirAB
were also detected in a non-pVH plasmid in
V. campbellii
. Taken together, our results provide novel insights into the acquisition and evolution of
pirAB
as well as related plasmids in the
Vibrio
Harveyi clade.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/srep42177</identifier><identifier>PMID: 28169338</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>45 ; 45/44 ; 631/114/2164 ; 631/326/41 ; Humanities and Social Sciences ; multidisciplinary ; Plasmids ; Science ; Siblings ; Transposons</subject><ispartof>Scientific reports, 2017-02, Vol.7 (1), p.42177-42177, Article 42177</ispartof><rights>The Author(s) 2017</rights><rights>Copyright Nature Publishing Group Feb 2017</rights><rights>Copyright © 2017, The Author(s) 2017 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c504t-c412aac21e6c7efc35899a018a8857b4d5ac93c32e8d14cbb2ec742f09e310943</citedby><cites>FETCH-LOGICAL-c504t-c412aac21e6c7efc35899a018a8857b4d5ac93c32e8d14cbb2ec742f09e310943</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5294582/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5294582/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,27903,27904,41099,42168,51554,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28169338$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Xiao, Jinzhou</creatorcontrib><creatorcontrib>Liu, Liyuan</creatorcontrib><creatorcontrib>Ke, Yiyun</creatorcontrib><creatorcontrib>Li, Xiefei</creatorcontrib><creatorcontrib>Liu, Yunfei</creatorcontrib><creatorcontrib>Pan, Yingjie</creatorcontrib><creatorcontrib>Yan, Shuling</creatorcontrib><creatorcontrib>Wang, Yongjie</creatorcontrib><title>Shrimp AHPND-causing plasmids encoding the PirAB toxins as mediated by pirAB-Tn903 are prevalent in various Vibrio species</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>Acute hepatopancreatic necrosis disease (AHPND) is a newly emerging shrimp disease caused by
pirAB
toxins encoded by a plasmid found in
Vibrio parahaemolyticus
. The
pirAB
toxins are the homologs of the
Photorhabdus
insect-related (Pir) toxins. Here, we report the complete sequences of the AHPND-causing plasmid isolated from
V. owensii
, as well as those of its 11 siblings (pVH family). In addition, we also included 13 related plasmids (pVH-r family) without the
pirAB
genes isolated from a variety of species within the
Vibrio
Harveyi clade. Furthermore, the
pirAB
-Tn903 composite transposon was identified in pVH, and both ends of the transposon appeared to have inserted simultaneously into the ancestor plasmid at different sites. The homologue counterparts of
pirAB
were also detected in a non-pVH plasmid in
V. campbellii
. Taken together, our results provide novel insights into the acquisition and evolution of
pirAB
as well as related plasmids in the
Vibrio
Harveyi clade.</description><subject>45</subject><subject>45/44</subject><subject>631/114/2164</subject><subject>631/326/41</subject><subject>Humanities and Social Sciences</subject><subject>multidisciplinary</subject><subject>Plasmids</subject><subject>Science</subject><subject>Siblings</subject><subject>Transposons</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>BENPR</sourceid><recordid>eNplkV1rFDEUhoMottRe-Ack4I0WRvO5k9wIa_2oULRg9TacyZzdTZnNTJOZxfbXm2Xrsmpucsh5eM978hLynLM3nEnzNicclOB1_YgcC6Z0JaQQjw_qI3Ka8w0rRwuruH1KjoThMyulOSb331cprAc6v7j6-qHyMOUQl3ToIK9DmylG37fbl3GF9Cqk-Xs69r9CzBQyXWMbYMSWNnd02Paq62iZpJCQDgk30GEcaYh0Ayn0U6Y_Q1MKmgf0AfMz8mQBXcbTh_uE_Pj08fr8orr89vnL-fyy8pqpsfKKCwAvOM58jQsvtbEWGDdgjK4b1WrwVnop0LRc-aYR6GslFsyi5MwqeULe7XSHqSmWfTGVoHND2RvSneshuL87Mazcst-47XdpI4rAqweB1N9OmEe3Dtlj10HEspbjZqYNr7k2BX35D3rTTymW9Ry3rDDMMFao1zvKpz6X_BZ7M5y5bahuH2phXxy635N_IizA2Q7IpRWXmA5G_qf2G7UHq74</recordid><startdate>20170207</startdate><enddate>20170207</enddate><creator>Xiao, Jinzhou</creator><creator>Liu, Liyuan</creator><creator>Ke, Yiyun</creator><creator>Li, Xiefei</creator><creator>Liu, Yunfei</creator><creator>Pan, Yingjie</creator><creator>Yan, Shuling</creator><creator>Wang, Yongjie</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>C6C</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20170207</creationdate><title>Shrimp AHPND-causing plasmids encoding the PirAB toxins as mediated by pirAB-Tn903 are prevalent in various Vibrio species</title><author>Xiao, Jinzhou ; Liu, Liyuan ; Ke, Yiyun ; Li, Xiefei ; Liu, Yunfei ; Pan, Yingjie ; Yan, Shuling ; Wang, Yongjie</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c504t-c412aac21e6c7efc35899a018a8857b4d5ac93c32e8d14cbb2ec742f09e310943</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>45</topic><topic>45/44</topic><topic>631/114/2164</topic><topic>631/326/41</topic><topic>Humanities and Social Sciences</topic><topic>multidisciplinary</topic><topic>Plasmids</topic><topic>Science</topic><topic>Siblings</topic><topic>Transposons</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xiao, Jinzhou</creatorcontrib><creatorcontrib>Liu, Liyuan</creatorcontrib><creatorcontrib>Ke, Yiyun</creatorcontrib><creatorcontrib>Li, Xiefei</creatorcontrib><creatorcontrib>Liu, Yunfei</creatorcontrib><creatorcontrib>Pan, Yingjie</creatorcontrib><creatorcontrib>Yan, Shuling</creatorcontrib><creatorcontrib>Wang, Yongjie</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Scientific reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xiao, Jinzhou</au><au>Liu, Liyuan</au><au>Ke, Yiyun</au><au>Li, Xiefei</au><au>Liu, Yunfei</au><au>Pan, Yingjie</au><au>Yan, Shuling</au><au>Wang, Yongjie</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Shrimp AHPND-causing plasmids encoding the PirAB toxins as mediated by pirAB-Tn903 are prevalent in various Vibrio species</atitle><jtitle>Scientific reports</jtitle><stitle>Sci Rep</stitle><addtitle>Sci Rep</addtitle><date>2017-02-07</date><risdate>2017</risdate><volume>7</volume><issue>1</issue><spage>42177</spage><epage>42177</epage><pages>42177-42177</pages><artnum>42177</artnum><issn>2045-2322</issn><eissn>2045-2322</eissn><abstract>Acute hepatopancreatic necrosis disease (AHPND) is a newly emerging shrimp disease caused by
pirAB
toxins encoded by a plasmid found in
Vibrio parahaemolyticus
. The
pirAB
toxins are the homologs of the
Photorhabdus
insect-related (Pir) toxins. Here, we report the complete sequences of the AHPND-causing plasmid isolated from
V. owensii
, as well as those of its 11 siblings (pVH family). In addition, we also included 13 related plasmids (pVH-r family) without the
pirAB
genes isolated from a variety of species within the
Vibrio
Harveyi clade. Furthermore, the
pirAB
-Tn903 composite transposon was identified in pVH, and both ends of the transposon appeared to have inserted simultaneously into the ancestor plasmid at different sites. The homologue counterparts of
pirAB
were also detected in a non-pVH plasmid in
V. campbellii
. Taken together, our results provide novel insights into the acquisition and evolution of
pirAB
as well as related plasmids in the
Vibrio
Harveyi clade.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>28169338</pmid><doi>10.1038/srep42177</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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source | Nature Free; Full-Text Journals in Chemistry (Open access); DOAJ Directory of Open Access Journals; PubMed Central; Alma/SFX Local Collection; EZB Electronic Journals Library; Springer Nature OA Free Journals |
subjects | 45 45/44 631/114/2164 631/326/41 Humanities and Social Sciences multidisciplinary Plasmids Science Siblings Transposons |
title | Shrimp AHPND-causing plasmids encoding the PirAB toxins as mediated by pirAB-Tn903 are prevalent in various Vibrio species |
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