G-Quadruplex in the NRF2 mRNA 5′ Untranslated Region Regulates De Novo NRF2 Protein Translation under Oxidative Stress
Inhibition of protein synthesis serves as a general measure of cellular consequences of chemical stress. A few proteins are translated selectively and influence cell fate. How these proteins can bypass the general control of translation remains unknown. We found that low to mild doses of oxidants in...
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creator | Lee, Sang C. Zhang, Jack Strom, Josh Yang, Danzhou Dinh, Thai Nho Kappeler, Kyle Chen, Qin M. |
description | Inhibition of protein synthesis serves as a general measure of cellular consequences of chemical stress. A few proteins are translated selectively and influence cell fate. How these proteins can bypass the general control of translation remains unknown. We found that low to mild doses of oxidants induce de novo translation of the NRF2 protein. Here we demonstrate the presence of a G-quadruplex structure in the 5′ untranslated region (UTR) of NRF2 mRNA, as measured by circular dichroism, nuclear magnetic resonance, and dimethylsulfate footprinting analyses. Such a structure is important for 5′-UTR activity, since its removal by sequence mutation eliminated H
2
O
2
-induced activation of the NRF2 5′ UTR. Liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based proteomics revealed elongation factor 1 alpha (EF1a) as a protein binding to the G-quadruplex sequence. Cells responded to H
2
O
2
treatment by increasing the EF1a protein association with NRF2 mRNA, as measured by RNA-protein interaction assays. The EF1a interaction with small and large subunits of ribosomes did not appear to change due to H
2
O
2
treatment, nor did posttranslational modifications, as measured by two-dimensional (2-D) Western blot analysis. Since NRF2 encodes a transcription factor essential for protection against tissue injury, our data have revealed a novel mechanism of cellular defense involving de novo NRF2 protein translation governed by the EF1a interaction with the G-quadruplex in the NRF2 5′ UTR during oxidative stress. |
doi_str_mv | 10.1128/MCB.00122-16 |
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2
O
2
-induced activation of the NRF2 5′ UTR. Liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based proteomics revealed elongation factor 1 alpha (EF1a) as a protein binding to the G-quadruplex sequence. Cells responded to H
2
O
2
treatment by increasing the EF1a protein association with NRF2 mRNA, as measured by RNA-protein interaction assays. The EF1a interaction with small and large subunits of ribosomes did not appear to change due to H
2
O
2
treatment, nor did posttranslational modifications, as measured by two-dimensional (2-D) Western blot analysis. Since NRF2 encodes a transcription factor essential for protection against tissue injury, our data have revealed a novel mechanism of cellular defense involving de novo NRF2 protein translation governed by the EF1a interaction with the G-quadruplex in the NRF2 5′ UTR during oxidative stress.</description><identifier>ISSN: 1098-5549</identifier><identifier>ISSN: 0270-7306</identifier><identifier>EISSN: 1098-5549</identifier><identifier>DOI: 10.1128/MCB.00122-16</identifier><identifier>PMID: 27736771</identifier><language>eng</language><publisher>United States: Taylor & Francis</publisher><subject>5' Untranslated Regions - drug effects ; antioxidant genes ; Circular Dichroism ; G-Quadruplexes ; HEK293 Cells ; HeLa Cells ; Humans ; Hydrogen Peroxide - pharmacology ; Magnetic Resonance Spectroscopy ; NF-E2-Related Factor 2 - chemistry ; NF-E2-Related Factor 2 - genetics ; NF-E2-Related Factor 2 - metabolism ; Oxidative Stress ; Peptide Elongation Factor 1 - metabolism ; Protein Biosynthesis - drug effects ; protein translation ; proteomics ; RNA binding proteins ; RNA structure ; RNA, Messenger - chemistry</subject><ispartof>Molecular and cellular biology, 2017-01, Vol.37 (1)</ispartof><rights>Copyright © 2016 American Society for Microbiology 2016</rights><rights>Copyright © 2016 American Society for Microbiology.</rights><rights>Copyright © 2016 American Society for Microbiology. 2016 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c465t-5753324d8782bc508b087e18250797ffd9ca2fa125f6dfbf4fad2c5e150321c03</citedby><cites>FETCH-LOGICAL-c465t-5753324d8782bc508b087e18250797ffd9ca2fa125f6dfbf4fad2c5e150321c03</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5192087/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5192087/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27736771$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Sang C.</creatorcontrib><creatorcontrib>Zhang, Jack</creatorcontrib><creatorcontrib>Strom, Josh</creatorcontrib><creatorcontrib>Yang, Danzhou</creatorcontrib><creatorcontrib>Dinh, Thai Nho</creatorcontrib><creatorcontrib>Kappeler, Kyle</creatorcontrib><creatorcontrib>Chen, Qin M.</creatorcontrib><title>G-Quadruplex in the NRF2 mRNA 5′ Untranslated Region Regulates De Novo NRF2 Protein Translation under Oxidative Stress</title><title>Molecular and cellular biology</title><addtitle>Mol Cell Biol</addtitle><description>Inhibition of protein synthesis serves as a general measure of cellular consequences of chemical stress. A few proteins are translated selectively and influence cell fate. How these proteins can bypass the general control of translation remains unknown. We found that low to mild doses of oxidants induce de novo translation of the NRF2 protein. Here we demonstrate the presence of a G-quadruplex structure in the 5′ untranslated region (UTR) of NRF2 mRNA, as measured by circular dichroism, nuclear magnetic resonance, and dimethylsulfate footprinting analyses. Such a structure is important for 5′-UTR activity, since its removal by sequence mutation eliminated H
2
O
2
-induced activation of the NRF2 5′ UTR. Liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based proteomics revealed elongation factor 1 alpha (EF1a) as a protein binding to the G-quadruplex sequence. Cells responded to H
2
O
2
treatment by increasing the EF1a protein association with NRF2 mRNA, as measured by RNA-protein interaction assays. The EF1a interaction with small and large subunits of ribosomes did not appear to change due to H
2
O
2
treatment, nor did posttranslational modifications, as measured by two-dimensional (2-D) Western blot analysis. Since NRF2 encodes a transcription factor essential for protection against tissue injury, our data have revealed a novel mechanism of cellular defense involving de novo NRF2 protein translation governed by the EF1a interaction with the G-quadruplex in the NRF2 5′ UTR during oxidative stress.</description><subject>5' Untranslated Regions - drug effects</subject><subject>antioxidant genes</subject><subject>Circular Dichroism</subject><subject>G-Quadruplexes</subject><subject>HEK293 Cells</subject><subject>HeLa Cells</subject><subject>Humans</subject><subject>Hydrogen Peroxide - pharmacology</subject><subject>Magnetic Resonance Spectroscopy</subject><subject>NF-E2-Related Factor 2 - chemistry</subject><subject>NF-E2-Related Factor 2 - genetics</subject><subject>NF-E2-Related Factor 2 - metabolism</subject><subject>Oxidative Stress</subject><subject>Peptide Elongation Factor 1 - metabolism</subject><subject>Protein Biosynthesis - drug effects</subject><subject>protein translation</subject><subject>proteomics</subject><subject>RNA binding proteins</subject><subject>RNA structure</subject><subject>RNA, Messenger - chemistry</subject><issn>1098-5549</issn><issn>0270-7306</issn><issn>1098-5549</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkbtuFDEUhi0EIiHQUSOXFEziy3hsN0hhISFSyGVJasvrS2I0M17smWXT8Uw8Ek-Ch12iIFFQHV--89lHPwAvMdrHmIiDT7N3-whhQircPAK7GElRMVbLxw_WO-BZzl8QQo1E9CnYIZzThnO8C9bH1eWobRqXrVvD0MPh1sGz-RGB3fzsELKf33_A635Ius-tHpyFc3cTYj-VcTrI8H3h4ypumi5SHFyxXG0bJnTsrUvwfB1s2a8c_Dwkl_Nz8MTrNrsX27oHro8-XM0-Vqfnxyezw9PK1A0bKsYZpaS2gguyMAyJBRLcYUEY4pJ7b6XRxGtMmG-sX_jaa0sMc5ghSrBBdA-83XiX46Jz1rhpmFYtU-h0ulNRB_X3TR9u1U1cKYYlKW8VweutIMWvo8uD6kI2rm117-KYFRacCEqEqP8DpbWUtZC0oG82qEkx5-T8_Y8wUlOuquSqfueqcFPwVw-nuIf_BFkAvgFC72Pq9LeYWqsGfdfG5EsYJmRF_6n-BaEwsRs</recordid><startdate>20170101</startdate><enddate>20170101</enddate><creator>Lee, Sang C.</creator><creator>Zhang, Jack</creator><creator>Strom, Josh</creator><creator>Yang, Danzhou</creator><creator>Dinh, Thai Nho</creator><creator>Kappeler, Kyle</creator><creator>Chen, Qin M.</creator><general>Taylor & Francis</general><general>American Society for Microbiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7TM</scope><scope>5PM</scope></search><sort><creationdate>20170101</creationdate><title>G-Quadruplex in the NRF2 mRNA 5′ Untranslated Region Regulates De Novo NRF2 Protein Translation under Oxidative Stress</title><author>Lee, Sang C. ; Zhang, Jack ; Strom, Josh ; Yang, Danzhou ; Dinh, Thai Nho ; Kappeler, Kyle ; Chen, Qin M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c465t-5753324d8782bc508b087e18250797ffd9ca2fa125f6dfbf4fad2c5e150321c03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>5' Untranslated Regions - drug effects</topic><topic>antioxidant genes</topic><topic>Circular Dichroism</topic><topic>G-Quadruplexes</topic><topic>HEK293 Cells</topic><topic>HeLa Cells</topic><topic>Humans</topic><topic>Hydrogen Peroxide - pharmacology</topic><topic>Magnetic Resonance Spectroscopy</topic><topic>NF-E2-Related Factor 2 - chemistry</topic><topic>NF-E2-Related Factor 2 - genetics</topic><topic>NF-E2-Related Factor 2 - metabolism</topic><topic>Oxidative Stress</topic><topic>Peptide Elongation Factor 1 - metabolism</topic><topic>Protein Biosynthesis - drug effects</topic><topic>protein translation</topic><topic>proteomics</topic><topic>RNA binding proteins</topic><topic>RNA structure</topic><topic>RNA, Messenger - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Sang C.</creatorcontrib><creatorcontrib>Zhang, Jack</creatorcontrib><creatorcontrib>Strom, Josh</creatorcontrib><creatorcontrib>Yang, Danzhou</creatorcontrib><creatorcontrib>Dinh, Thai Nho</creatorcontrib><creatorcontrib>Kappeler, Kyle</creatorcontrib><creatorcontrib>Chen, Qin M.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Nucleic Acids Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular and cellular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Sang C.</au><au>Zhang, Jack</au><au>Strom, Josh</au><au>Yang, Danzhou</au><au>Dinh, Thai Nho</au><au>Kappeler, Kyle</au><au>Chen, Qin M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>G-Quadruplex in the NRF2 mRNA 5′ Untranslated Region Regulates De Novo NRF2 Protein Translation under Oxidative Stress</atitle><jtitle>Molecular and cellular biology</jtitle><addtitle>Mol Cell Biol</addtitle><date>2017-01-01</date><risdate>2017</risdate><volume>37</volume><issue>1</issue><issn>1098-5549</issn><issn>0270-7306</issn><eissn>1098-5549</eissn><abstract>Inhibition of protein synthesis serves as a general measure of cellular consequences of chemical stress. A few proteins are translated selectively and influence cell fate. How these proteins can bypass the general control of translation remains unknown. We found that low to mild doses of oxidants induce de novo translation of the NRF2 protein. Here we demonstrate the presence of a G-quadruplex structure in the 5′ untranslated region (UTR) of NRF2 mRNA, as measured by circular dichroism, nuclear magnetic resonance, and dimethylsulfate footprinting analyses. Such a structure is important for 5′-UTR activity, since its removal by sequence mutation eliminated H
2
O
2
-induced activation of the NRF2 5′ UTR. Liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based proteomics revealed elongation factor 1 alpha (EF1a) as a protein binding to the G-quadruplex sequence. Cells responded to H
2
O
2
treatment by increasing the EF1a protein association with NRF2 mRNA, as measured by RNA-protein interaction assays. The EF1a interaction with small and large subunits of ribosomes did not appear to change due to H
2
O
2
treatment, nor did posttranslational modifications, as measured by two-dimensional (2-D) Western blot analysis. Since NRF2 encodes a transcription factor essential for protection against tissue injury, our data have revealed a novel mechanism of cellular defense involving de novo NRF2 protein translation governed by the EF1a interaction with the G-quadruplex in the NRF2 5′ UTR during oxidative stress.</abstract><cop>United States</cop><pub>Taylor & Francis</pub><pmid>27736771</pmid><doi>10.1128/MCB.00122-16</doi><oa>free_for_read</oa></addata></record> |
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subjects | 5' Untranslated Regions - drug effects antioxidant genes Circular Dichroism G-Quadruplexes HEK293 Cells HeLa Cells Humans Hydrogen Peroxide - pharmacology Magnetic Resonance Spectroscopy NF-E2-Related Factor 2 - chemistry NF-E2-Related Factor 2 - genetics NF-E2-Related Factor 2 - metabolism Oxidative Stress Peptide Elongation Factor 1 - metabolism Protein Biosynthesis - drug effects protein translation proteomics RNA binding proteins RNA structure RNA, Messenger - chemistry |
title | G-Quadruplex in the NRF2 mRNA 5′ Untranslated Region Regulates De Novo NRF2 Protein Translation under Oxidative Stress |
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