TransComb: genome-guided transcriptome assembly via combing junctions in splicing graphs

Transcriptome assemblers aim to reconstruct full-length transcripts from RNA-seq data. We present TransComb, a genome-guided assembler developed based on a junction graph, weighted by a bin-packing strategy and paired-end information. A newly designed extension method based on weighted junction grap...

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Veröffentlicht in:Genome Biology 2016-10, Vol.17 (1), p.213-213, Article 213
Hauptverfasser: Liu, Juntao, Yu, Ting, Jiang, Tao, Li, Guojun
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Sprache:eng
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