Radiation-Tolerant Bacteria Isolated from High Altitude Soil in Tibet
This study reports the identification of ionising radiation tolerant bacteria from a high elevation arid region of central Tibet. Nineteen isolates were isolated from soil exposed to ionising radiation at doses from 0 to 15 kGy. Isolates were phylogenetically characterised using 16S rRNA gene sequen...
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Veröffentlicht in: | Indian journal of microbiology 2016-12, Vol.56 (4), p.508-512 |
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description | This study reports the identification of ionising radiation tolerant bacteria from a high elevation arid region of central Tibet. Nineteen isolates were isolated from soil exposed to ionising radiation at doses from 0 to 15 kGy. Isolates were phylogenetically characterised using 16S rRNA gene sequences. Most isolates comprised taxa from the Actinobacteria, Cyanobacteria, Firmicutes and proteobacteria and these survived doses up to 5 kGy. The Firmicutes and Deinococci also survived doses up to 10 kGy, and the highest dose of 15 kGy was survived only by the Deinococci. No altitude-related pattern was discernible within the range 4638–5240 m, instead culturable bacterial estimates for irradiated soil were strongly influenced by the abundance of Deinococci. We conclude that the relatively high UV exposure in Tibet has contributed to the high diversity of radiation tolerant soil bacteria. In addition, the strong association between desiccation-tolerance and radiation tolerance pathways suggests the arid environment may also have selected in favour of radiation tolerant taxa. |
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Nineteen isolates were isolated from soil exposed to ionising radiation at doses from 0 to 15 kGy. Isolates were phylogenetically characterised using 16S rRNA gene sequences. Most isolates comprised taxa from the Actinobacteria, Cyanobacteria, Firmicutes and proteobacteria and these survived doses up to 5 kGy. The Firmicutes and Deinococci also survived doses up to 10 kGy, and the highest dose of 15 kGy was survived only by the Deinococci. No altitude-related pattern was discernible within the range 4638–5240 m, instead culturable bacterial estimates for irradiated soil were strongly influenced by the abundance of Deinococci. We conclude that the relatively high UV exposure in Tibet has contributed to the high diversity of radiation tolerant soil bacteria. In addition, the strong association between desiccation-tolerance and radiation tolerance pathways suggests the arid environment may also have selected in favour of radiation tolerant taxa.</description><identifier>ISSN: 0046-8991</identifier><identifier>EISSN: 0973-7715</identifier><identifier>DOI: 10.1007/s12088-016-0604-6</identifier><identifier>PMID: 27784950</identifier><language>eng</language><publisher>New Delhi: Springer India</publisher><subject>Altitude ; Arid environments ; Arid zones ; Bacteria ; Biomedical and Life Sciences ; Cyanobacteria ; Desiccation ; Genomes ; Ionizing radiation ; Life Sciences ; Medical Microbiology ; Microbiology ; Microorganisms ; Phylogenetics ; Short Communication ; Ultraviolet radiation</subject><ispartof>Indian journal of microbiology, 2016-12, Vol.56 (4), p.508-512</ispartof><rights>Association of Microbiologists of India 2016</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c470t-dda7993e8acefac1118a14583f786472b23c360c16e7473349d1f4dd2122d2433</citedby><cites>FETCH-LOGICAL-c470t-dda7993e8acefac1118a14583f786472b23c360c16e7473349d1f4dd2122d2433</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5061696/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5061696/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,41488,42557,51319,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27784950$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rao, Subramanya</creatorcontrib><creatorcontrib>Chan, Olivia W.</creatorcontrib><creatorcontrib>Lacap-Bugler, Donnabella C.</creatorcontrib><creatorcontrib>Pointing, Stephen B.</creatorcontrib><title>Radiation-Tolerant Bacteria Isolated from High Altitude Soil in Tibet</title><title>Indian journal of microbiology</title><addtitle>Indian J Microbiol</addtitle><addtitle>Indian J Microbiol</addtitle><description>This study reports the identification of ionising radiation tolerant bacteria from a high elevation arid region of central Tibet. Nineteen isolates were isolated from soil exposed to ionising radiation at doses from 0 to 15 kGy. Isolates were phylogenetically characterised using 16S rRNA gene sequences. Most isolates comprised taxa from the Actinobacteria, Cyanobacteria, Firmicutes and proteobacteria and these survived doses up to 5 kGy. The Firmicutes and Deinococci also survived doses up to 10 kGy, and the highest dose of 15 kGy was survived only by the Deinococci. No altitude-related pattern was discernible within the range 4638–5240 m, instead culturable bacterial estimates for irradiated soil were strongly influenced by the abundance of Deinococci. We conclude that the relatively high UV exposure in Tibet has contributed to the high diversity of radiation tolerant soil bacteria. In addition, the strong association between desiccation-tolerance and radiation tolerance pathways suggests the arid environment may also have selected in favour of radiation tolerant taxa.</description><subject>Altitude</subject><subject>Arid environments</subject><subject>Arid zones</subject><subject>Bacteria</subject><subject>Biomedical and Life Sciences</subject><subject>Cyanobacteria</subject><subject>Desiccation</subject><subject>Genomes</subject><subject>Ionizing radiation</subject><subject>Life Sciences</subject><subject>Medical Microbiology</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Phylogenetics</subject><subject>Short Communication</subject><subject>Ultraviolet radiation</subject><issn>0046-8991</issn><issn>0973-7715</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kV1rHCEUhqUkdJO0P6A3YSA3vTHxqKPOTSEJ-VgIBNLttbjqbAyz41adQv99XTYNm0KvFM7j63l5EPoC5BwIkRcZKFEKExCYCMKx-ICOSCcZlhLag3onXGDVdTBDxzm_ENKKTrQf0YxKqXjXkiN082RcMCXEES_i4JMZS3NlbPEpmGae42CKd02f4rq5D6vn5nIooUzON99jGJowNouw9OUTOuzNkP3n1_ME_bi9WVzf44fHu_n15QO2XJKCnTOy65hXxvreWABQBnirWC-V4JIuKbNMEAvCSy4Z452DnjtHgVJHOWMn6NsudzMt195ZP5ZkBr1JYW3Sbx1N0O8nY3jWq_hLt0RA7V4Dvr4GpPhz8rnodcjWD4MZfZyyBsXallEOUNGzf9CXOKWx1qsUVSClELJSsKNsijkn378tA0RvJemdJF0l6a0kvV3idL_F24u_VipAd0Cuo3Hl097X_039AyGem6Y</recordid><startdate>20161201</startdate><enddate>20161201</enddate><creator>Rao, Subramanya</creator><creator>Chan, Olivia W.</creator><creator>Lacap-Bugler, Donnabella C.</creator><creator>Pointing, Stephen B.</creator><general>Springer India</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>04Q</scope><scope>04W</scope><scope>3V.</scope><scope>7T7</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20161201</creationdate><title>Radiation-Tolerant Bacteria Isolated from High Altitude Soil in Tibet</title><author>Rao, Subramanya ; Chan, Olivia W. ; Lacap-Bugler, Donnabella C. ; Pointing, Stephen B.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c470t-dda7993e8acefac1118a14583f786472b23c360c16e7473349d1f4dd2122d2433</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Altitude</topic><topic>Arid environments</topic><topic>Arid zones</topic><topic>Bacteria</topic><topic>Biomedical and Life Sciences</topic><topic>Cyanobacteria</topic><topic>Desiccation</topic><topic>Genomes</topic><topic>Ionizing radiation</topic><topic>Life Sciences</topic><topic>Medical Microbiology</topic><topic>Microbiology</topic><topic>Microorganisms</topic><topic>Phylogenetics</topic><topic>Short Communication</topic><topic>Ultraviolet radiation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rao, Subramanya</creatorcontrib><creatorcontrib>Chan, Olivia W.</creatorcontrib><creatorcontrib>Lacap-Bugler, Donnabella C.</creatorcontrib><creatorcontrib>Pointing, Stephen B.</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>India Database</collection><collection>India Database: Science & Technology</collection><collection>ProQuest Central (Corporate)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Indian journal of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rao, Subramanya</au><au>Chan, Olivia W.</au><au>Lacap-Bugler, Donnabella C.</au><au>Pointing, Stephen B.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Radiation-Tolerant Bacteria Isolated from High Altitude Soil in Tibet</atitle><jtitle>Indian journal of microbiology</jtitle><stitle>Indian J Microbiol</stitle><addtitle>Indian J Microbiol</addtitle><date>2016-12-01</date><risdate>2016</risdate><volume>56</volume><issue>4</issue><spage>508</spage><epage>512</epage><pages>508-512</pages><issn>0046-8991</issn><eissn>0973-7715</eissn><abstract>This study reports the identification of ionising radiation tolerant bacteria from a high elevation arid region of central Tibet. Nineteen isolates were isolated from soil exposed to ionising radiation at doses from 0 to 15 kGy. Isolates were phylogenetically characterised using 16S rRNA gene sequences. Most isolates comprised taxa from the Actinobacteria, Cyanobacteria, Firmicutes and proteobacteria and these survived doses up to 5 kGy. The Firmicutes and Deinococci also survived doses up to 10 kGy, and the highest dose of 15 kGy was survived only by the Deinococci. No altitude-related pattern was discernible within the range 4638–5240 m, instead culturable bacterial estimates for irradiated soil were strongly influenced by the abundance of Deinococci. We conclude that the relatively high UV exposure in Tibet has contributed to the high diversity of radiation tolerant soil bacteria. 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subjects | Altitude Arid environments Arid zones Bacteria Biomedical and Life Sciences Cyanobacteria Desiccation Genomes Ionizing radiation Life Sciences Medical Microbiology Microbiology Microorganisms Phylogenetics Short Communication Ultraviolet radiation |
title | Radiation-Tolerant Bacteria Isolated from High Altitude Soil in Tibet |
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