Membrane Interaction of the Factor VIIIa Discoidin Domains in Atomistic Detail
A recently developed membrane-mimetic model was applied to study membrane interaction and binding of the two anchoring C2-like discoidin domains of human coagulation factor VIIIa (FVIIIa), the C1 and C2 domains. Both individual domains, FVIII C1 and FVIII C2, were observed to bind the phospholipid m...
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Veröffentlicht in: | Biochemistry (Easton) 2015-10, Vol.54 (39), p.6123-6131 |
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creator | Madsen, Jesper J Ohkubo, Y. Zenmei Peters, Günther H Faber, Johan H Tajkhorshid, Emad Olsen, Ole H |
description | A recently developed membrane-mimetic model was applied to study membrane interaction and binding of the two anchoring C2-like discoidin domains of human coagulation factor VIIIa (FVIIIa), the C1 and C2 domains. Both individual domains, FVIII C1 and FVIII C2, were observed to bind the phospholipid membrane by partial or full insertion of their extruding loops (the spikes). However, the two domains adopted different molecular orientations in their membrane-bound states; FVIII C2 roughly was positioned normal to the membrane plane, while FVIII C1 displayed a multitude of tilted orientations. The results indicate that FVIII C1 may be important in modulating the orientation of the FVIIIa molecule to optimize the interaction with FIXa, which is anchored to the membrane via its γ-carboxyglutamic acid-rich (Gla) domain. Additionally, a structural change was observed in FVIII C1 in the coiled main chain leading the first spike. A tight interaction with one lipid per domain, similar to what has been suggested for the homologous FVa C2, is characterized. Finally, we rationalize known FVIII antibody epitopes and the scarcity of documented hemophilic missense mutations related to improper membrane binding of FVIIIa, based on the prevalent nonspecificity of ionic interactions in the simulated membrane-bound states of FVIII C1 and FVIII C2. |
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Zenmei ; Peters, Günther H ; Faber, Johan H ; Tajkhorshid, Emad ; Olsen, Ole H</creator><creatorcontrib>Madsen, Jesper J ; Ohkubo, Y. Zenmei ; Peters, Günther H ; Faber, Johan H ; Tajkhorshid, Emad ; Olsen, Ole H</creatorcontrib><description>A recently developed membrane-mimetic model was applied to study membrane interaction and binding of the two anchoring C2-like discoidin domains of human coagulation factor VIIIa (FVIIIa), the C1 and C2 domains. Both individual domains, FVIII C1 and FVIII C2, were observed to bind the phospholipid membrane by partial or full insertion of their extruding loops (the spikes). However, the two domains adopted different molecular orientations in their membrane-bound states; FVIII C2 roughly was positioned normal to the membrane plane, while FVIII C1 displayed a multitude of tilted orientations. The results indicate that FVIII C1 may be important in modulating the orientation of the FVIIIa molecule to optimize the interaction with FIXa, which is anchored to the membrane via its γ-carboxyglutamic acid-rich (Gla) domain. Additionally, a structural change was observed in FVIII C1 in the coiled main chain leading the first spike. A tight interaction with one lipid per domain, similar to what has been suggested for the homologous FVa C2, is characterized. Finally, we rationalize known FVIII antibody epitopes and the scarcity of documented hemophilic missense mutations related to improper membrane binding of FVIIIa, based on the prevalent nonspecificity of ionic interactions in the simulated membrane-bound states of FVIII C1 and FVIII C2.</description><identifier>ISSN: 0006-2960</identifier><identifier>ISSN: 1520-4995</identifier><identifier>EISSN: 1520-4995</identifier><identifier>DOI: 10.1021/acs.biochem.5b00417</identifier><identifier>PMID: 26346528</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>antibodies ; coagulation ; epitopes ; Epitopes - chemistry ; Epitopes - genetics ; Epitopes - metabolism ; Factor VIII - chemistry ; Factor VIII - genetics ; Factor VIII - metabolism ; Hemophilia A - genetics ; Hemophilia A - metabolism ; Humans ; Membranes, Artificial ; missense mutation ; Mutation, Missense ; phospholipids ; Phospholipids - chemistry ; Phospholipids - genetics ; Phospholipids - metabolism ; Protein Structure, Secondary ; Protein Structure, Tertiary</subject><ispartof>Biochemistry (Easton), 2015-10, Vol.54 (39), p.6123-6131</ispartof><rights>Copyright © 2015 American Chemical Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a478t-905be92485209e4684b0aacc617a3bc29a4b12196f6f66c6abdc335cacddea603</citedby><cites>FETCH-LOGICAL-a478t-905be92485209e4684b0aacc617a3bc29a4b12196f6f66c6abdc335cacddea603</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.biochem.5b00417$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.biochem.5b00417$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>230,314,776,780,881,2751,27055,27903,27904,56716,56766</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26346528$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Madsen, Jesper J</creatorcontrib><creatorcontrib>Ohkubo, Y. Zenmei</creatorcontrib><creatorcontrib>Peters, Günther H</creatorcontrib><creatorcontrib>Faber, Johan H</creatorcontrib><creatorcontrib>Tajkhorshid, Emad</creatorcontrib><creatorcontrib>Olsen, Ole H</creatorcontrib><title>Membrane Interaction of the Factor VIIIa Discoidin Domains in Atomistic Detail</title><title>Biochemistry (Easton)</title><addtitle>Biochemistry</addtitle><description>A recently developed membrane-mimetic model was applied to study membrane interaction and binding of the two anchoring C2-like discoidin domains of human coagulation factor VIIIa (FVIIIa), the C1 and C2 domains. Both individual domains, FVIII C1 and FVIII C2, were observed to bind the phospholipid membrane by partial or full insertion of their extruding loops (the spikes). However, the two domains adopted different molecular orientations in their membrane-bound states; FVIII C2 roughly was positioned normal to the membrane plane, while FVIII C1 displayed a multitude of tilted orientations. The results indicate that FVIII C1 may be important in modulating the orientation of the FVIIIa molecule to optimize the interaction with FIXa, which is anchored to the membrane via its γ-carboxyglutamic acid-rich (Gla) domain. Additionally, a structural change was observed in FVIII C1 in the coiled main chain leading the first spike. A tight interaction with one lipid per domain, similar to what has been suggested for the homologous FVa C2, is characterized. Finally, we rationalize known FVIII antibody epitopes and the scarcity of documented hemophilic missense mutations related to improper membrane binding of FVIIIa, based on the prevalent nonspecificity of ionic interactions in the simulated membrane-bound states of FVIII C1 and FVIII C2.</description><subject>antibodies</subject><subject>coagulation</subject><subject>epitopes</subject><subject>Epitopes - chemistry</subject><subject>Epitopes - genetics</subject><subject>Epitopes - metabolism</subject><subject>Factor VIII - chemistry</subject><subject>Factor VIII - genetics</subject><subject>Factor VIII - metabolism</subject><subject>Hemophilia A - genetics</subject><subject>Hemophilia A - metabolism</subject><subject>Humans</subject><subject>Membranes, Artificial</subject><subject>missense mutation</subject><subject>Mutation, Missense</subject><subject>phospholipids</subject><subject>Phospholipids - chemistry</subject><subject>Phospholipids - genetics</subject><subject>Phospholipids - metabolism</subject><subject>Protein Structure, Secondary</subject><subject>Protein Structure, Tertiary</subject><issn>0006-2960</issn><issn>1520-4995</issn><issn>1520-4995</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFUcFOGzEQtSqqklK-AAn5yGWD7fV61xekKCHtSilcoFdr7HWI0e462E6l_j1GCVG5tPJhPJr3nmbeQ-iCkikljF6DiVPtvNnYYVppQjitP6EJrRgpuJTVCZoQQkTBpCCn6GuMz7nlpOZf0CkTJRcVaybo7qcddIDR4nZMNoBJzo_Yr3HaWLzMrQ_4V9u2gBcuGu86N-KFH8CNEefvLPnBxeQMXtgErv-GPq-hj_b8UM_Q4_L2Yf6jWN1_b-ezVQG8blIhSaWtZLzJy0rLRcM1ATBG0BpKbZgErimjUqzzE0aA7kxZVgZM11kQpDxDN3vd7U4PtjN2TAF6tQ1ugPBHeXDq42R0G_Xkf6uKVNmFOgtcHQSCf9nZmFS-w9i-z1b4XVS0KYXgDZfl_6E1bSTlrKEZWu6hJvgYg10fN6JEvYWmcmjqEJo6hJZZl38fc-S8p5QB13vAG_vZ78KYvf2n5CtQzaYm</recordid><startdate>20151006</startdate><enddate>20151006</enddate><creator>Madsen, Jesper J</creator><creator>Ohkubo, Y. Zenmei</creator><creator>Peters, Günther H</creator><creator>Faber, Johan H</creator><creator>Tajkhorshid, Emad</creator><creator>Olsen, Ole H</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope></search><sort><creationdate>20151006</creationdate><title>Membrane Interaction of the Factor VIIIa Discoidin Domains in Atomistic Detail</title><author>Madsen, Jesper J ; Ohkubo, Y. Zenmei ; Peters, Günther H ; Faber, Johan H ; Tajkhorshid, Emad ; Olsen, Ole H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a478t-905be92485209e4684b0aacc617a3bc29a4b12196f6f66c6abdc335cacddea603</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>antibodies</topic><topic>coagulation</topic><topic>epitopes</topic><topic>Epitopes - chemistry</topic><topic>Epitopes - genetics</topic><topic>Epitopes - metabolism</topic><topic>Factor VIII - chemistry</topic><topic>Factor VIII - genetics</topic><topic>Factor VIII - metabolism</topic><topic>Hemophilia A - genetics</topic><topic>Hemophilia A - metabolism</topic><topic>Humans</topic><topic>Membranes, Artificial</topic><topic>missense mutation</topic><topic>Mutation, Missense</topic><topic>phospholipids</topic><topic>Phospholipids - chemistry</topic><topic>Phospholipids - genetics</topic><topic>Phospholipids - metabolism</topic><topic>Protein Structure, Secondary</topic><topic>Protein Structure, Tertiary</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Madsen, Jesper J</creatorcontrib><creatorcontrib>Ohkubo, Y. Zenmei</creatorcontrib><creatorcontrib>Peters, Günther H</creatorcontrib><creatorcontrib>Faber, Johan H</creatorcontrib><creatorcontrib>Tajkhorshid, Emad</creatorcontrib><creatorcontrib>Olsen, Ole H</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biochemistry (Easton)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Madsen, Jesper J</au><au>Ohkubo, Y. Zenmei</au><au>Peters, Günther H</au><au>Faber, Johan H</au><au>Tajkhorshid, Emad</au><au>Olsen, Ole H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Membrane Interaction of the Factor VIIIa Discoidin Domains in Atomistic Detail</atitle><jtitle>Biochemistry (Easton)</jtitle><addtitle>Biochemistry</addtitle><date>2015-10-06</date><risdate>2015</risdate><volume>54</volume><issue>39</issue><spage>6123</spage><epage>6131</epage><pages>6123-6131</pages><issn>0006-2960</issn><issn>1520-4995</issn><eissn>1520-4995</eissn><abstract>A recently developed membrane-mimetic model was applied to study membrane interaction and binding of the two anchoring C2-like discoidin domains of human coagulation factor VIIIa (FVIIIa), the C1 and C2 domains. Both individual domains, FVIII C1 and FVIII C2, were observed to bind the phospholipid membrane by partial or full insertion of their extruding loops (the spikes). However, the two domains adopted different molecular orientations in their membrane-bound states; FVIII C2 roughly was positioned normal to the membrane plane, while FVIII C1 displayed a multitude of tilted orientations. The results indicate that FVIII C1 may be important in modulating the orientation of the FVIIIa molecule to optimize the interaction with FIXa, which is anchored to the membrane via its γ-carboxyglutamic acid-rich (Gla) domain. Additionally, a structural change was observed in FVIII C1 in the coiled main chain leading the first spike. A tight interaction with one lipid per domain, similar to what has been suggested for the homologous FVa C2, is characterized. 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subjects | antibodies coagulation epitopes Epitopes - chemistry Epitopes - genetics Epitopes - metabolism Factor VIII - chemistry Factor VIII - genetics Factor VIII - metabolism Hemophilia A - genetics Hemophilia A - metabolism Humans Membranes, Artificial missense mutation Mutation, Missense phospholipids Phospholipids - chemistry Phospholipids - genetics Phospholipids - metabolism Protein Structure, Secondary Protein Structure, Tertiary |
title | Membrane Interaction of the Factor VIIIa Discoidin Domains in Atomistic Detail |
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