Identification of distinct genes associated with seawater aspiration-induced acute lung injury by gene expression profile analysis

Seawater aspiration-induced acute lung injury (ALI) is a syndrome associated with a high mortality rate, which is characterized by severe hypoxemia, pulmonary edema and inflammation. The present study is the first, to the best of our knowledge, to analyze gene expression profiles from a rat model of...

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Veröffentlicht in:Molecular medicine reports 2016-10, Vol.14 (4), p.3168-3178
Hauptverfasser: Liu, Wei, Pan, Lei, Zhang, Minlong, Bo, Liyan, Li, Congcong, Liu, Qingqing, Wang, Li, Jin, Faguang
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container_issue 4
container_start_page 3168
container_title Molecular medicine reports
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creator Liu, Wei
Pan, Lei
Zhang, Minlong
Bo, Liyan
Li, Congcong
Liu, Qingqing
Wang, Li
Jin, Faguang
description Seawater aspiration-induced acute lung injury (ALI) is a syndrome associated with a high mortality rate, which is characterized by severe hypoxemia, pulmonary edema and inflammation. The present study is the first, to the best of our knowledge, to analyze gene expression profiles from a rat model of seawater aspiration-induced ALI. Adult male Sprague-Dawley rats were instilled with seawater (4 ml/kg) in the seawater aspiration-induced ALI group (S group) or with distilled water (4 ml/kg) in the distilled water negative control group (D group). In the blank control group (C group) the rats' tracheae were exposed without instillation. Subsequently, lung samples were examined by histopathology; total protein concentration was detected in bronchoalveolar lavage fluid (BALF); lung wet/dry weight ratios were determined; and transcript expression was detected by gene sequencing analysis. The results demonstrated that histopathological alterations, pulmonary edema and total protein concentrations in BALF were increased in the S group compared with in the D group. Analysis of differential gene expression identified up and downregulated genes in the S group compared with in the D and C groups. A gene ontology analysis of the differential gene expression revealed enrichment of genes in the functional pathways associated with neutrophil chemotaxis, immune and defense responses, and cytokine activity. Kyoto Encyclopedia of Genes and Genomes analysis revealed that the cytokine-cytokine receptor interaction pathway was one of the most important pathways involved in seawater aspiration-induced ALI. In conclusion, activation of the cytokine-cytokine receptor interaction pathway may have an essential role in the progression of seawater aspiration-induced ALI, and the downregulation of tumor necrosis factor superfamily member 10 may enhance inflammation. Furthermore, IL-6 may be considered a biomarker in seawater aspiration-induced ALI.
doi_str_mv 10.3892/mmr.2016.5607
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Analysis of differential gene expression identified up and downregulated genes in the S group compared with in the D and C groups. A gene ontology analysis of the differential gene expression revealed enrichment of genes in the functional pathways associated with neutrophil chemotaxis, immune and defense responses, and cytokine activity. Kyoto Encyclopedia of Genes and Genomes analysis revealed that the cytokine-cytokine receptor interaction pathway was one of the most important pathways involved in seawater aspiration-induced ALI. In conclusion, activation of the cytokine-cytokine receptor interaction pathway may have an essential role in the progression of seawater aspiration-induced ALI, and the downregulation of tumor necrosis factor superfamily member 10 may enhance inflammation. 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Spandidos</publisher><subject>Acute Lung Injury - genetics ; Acute Lung Injury - pathology ; Acute respiratory distress syndrome ; Alveoli ; Animals ; Bronchoalveolar Lavage Fluid ; Bronchus ; Care and treatment ; Chemokines ; Chemotaxis ; Cytokines ; Development and progression ; Disease Models, Animal ; Edema ; Gene expression ; gene expression profiles ; Gene Expression Regulation ; Gene Ontology ; Genetic aspects ; Genomes ; Genotype ; Health aspects ; Histopathology ; Hypoxemia ; IL-6 ; Interleukin 6 ; Kinases ; Laboratory animals ; Lung - metabolism ; Lung - pathology ; Lungs ; Male ; Neutrophils ; Rats, Sprague-Dawley ; Rodents ; Seawater - adverse effects ; seawater aspiration-induced ALI ; Sepsis ; TNFSF10 ; Transcription ; Transcriptome</subject><ispartof>Molecular medicine reports, 2016-10, Vol.14 (4), p.3168-3178</ispartof><rights>Copyright: © Liu et al.</rights><rights>COPYRIGHT 2016 Spandidos Publications</rights><rights>Copyright Spandidos Publications UK Ltd. 2016</rights><rights>Copyright: © Liu et al. 2016</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c514t-482ac02ee4c567ca13d91697aea7ba2e91a9767c3891ff8d6bfab238496a36ac3</citedby><cites>FETCH-LOGICAL-c514t-482ac02ee4c567ca13d91697aea7ba2e91a9767c3891ff8d6bfab238496a36ac3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,5571,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27509884$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Wei</creatorcontrib><creatorcontrib>Pan, Lei</creatorcontrib><creatorcontrib>Zhang, Minlong</creatorcontrib><creatorcontrib>Bo, Liyan</creatorcontrib><creatorcontrib>Li, Congcong</creatorcontrib><creatorcontrib>Liu, Qingqing</creatorcontrib><creatorcontrib>Wang, Li</creatorcontrib><creatorcontrib>Jin, Faguang</creatorcontrib><title>Identification of distinct genes associated with seawater aspiration-induced acute lung injury by gene expression profile analysis</title><title>Molecular medicine reports</title><addtitle>Mol Med Rep</addtitle><description>Seawater aspiration-induced acute lung injury (ALI) is a syndrome associated with a high mortality rate, which is characterized by severe hypoxemia, pulmonary edema and inflammation. 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The present study is the first, to the best of our knowledge, to analyze gene expression profiles from a rat model of seawater aspiration-induced ALI. Adult male Sprague-Dawley rats were instilled with seawater (4 ml/kg) in the seawater aspiration-induced ALI group (S group) or with distilled water (4 ml/kg) in the distilled water negative control group (D group). In the blank control group (C group) the rats' tracheae were exposed without instillation. Subsequently, lung samples were examined by histopathology; total protein concentration was detected in bronchoalveolar lavage fluid (BALF); lung wet/dry weight ratios were determined; and transcript expression was detected by gene sequencing analysis. The results demonstrated that histopathological alterations, pulmonary edema and total protein concentrations in BALF were increased in the S group compared with in the D group. Analysis of differential gene expression identified up and downregulated genes in the S group compared with in the D and C groups. A gene ontology analysis of the differential gene expression revealed enrichment of genes in the functional pathways associated with neutrophil chemotaxis, immune and defense responses, and cytokine activity. Kyoto Encyclopedia of Genes and Genomes analysis revealed that the cytokine-cytokine receptor interaction pathway was one of the most important pathways involved in seawater aspiration-induced ALI. In conclusion, activation of the cytokine-cytokine receptor interaction pathway may have an essential role in the progression of seawater aspiration-induced ALI, and the downregulation of tumor necrosis factor superfamily member 10 may enhance inflammation. Furthermore, IL-6 may be considered a biomarker in seawater aspiration-induced ALI.</abstract><cop>Greece</cop><pub>D.A. 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subjects Acute Lung Injury - genetics
Acute Lung Injury - pathology
Acute respiratory distress syndrome
Alveoli
Animals
Bronchoalveolar Lavage Fluid
Bronchus
Care and treatment
Chemokines
Chemotaxis
Cytokines
Development and progression
Disease Models, Animal
Edema
Gene expression
gene expression profiles
Gene Expression Regulation
Gene Ontology
Genetic aspects
Genomes
Genotype
Health aspects
Histopathology
Hypoxemia
IL-6
Interleukin 6
Kinases
Laboratory animals
Lung - metabolism
Lung - pathology
Lungs
Male
Neutrophils
Rats, Sprague-Dawley
Rodents
Seawater - adverse effects
seawater aspiration-induced ALI
Sepsis
TNFSF10
Transcription
Transcriptome
title Identification of distinct genes associated with seawater aspiration-induced acute lung injury by gene expression profile analysis
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