A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production
Infection by the opportunistic pathogen Pseudomonas aeruginosa is a leading cause of morbidity and mortality seen in cystic fibrosis (CF) patients. This is mainly due to the genotypic and phenotypic changes of the bacteria that cause conversion from a typical nonmucoid to a mucoid form in the CF lun...
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creator | Sautter, Robert Ramos, Damaris Schneper, Lisa Ciofu, Oana Wassermann, Tina Koh, Chong-Lek Heydorn, Arne Hentzer, Morton Høiby, Niels Kharazmi, Arsalan Molin, Søren DeVries, Caroline A. Ohman, Dennis E. Mathee, Kalai |
description | Infection by the opportunistic pathogen Pseudomonas aeruginosa is a leading cause of morbidity and mortality seen in cystic fibrosis (CF) patients. This is mainly due to the genotypic and phenotypic changes of the bacteria that cause conversion from a typical nonmucoid to a mucoid form in the CF lung. Mucoid conversion is indicative of overproduction of a capsule-like polysaccharide called alginate. The alginate-overproducing (Alg+) mucoid phenotype seen in the CF isolates is extremely unstable. Low oxygen tension growth of mucoid variants readily selects for nonmucoid variants. The switching off mechanism has been mapped to the algT/U locus, and the molecular basis for this conversion was partially attributed to mutations in the algT/U gene itself. To further characterize molecular changes resulting in the unstable phenotype, an isogenic PAO1 derivative that is constitutively Alg+ due to the replacement of the mucA with mucA22 (PDO300) was used. The mucA22 allele is common in mucoid CF isolates. Thirty-four spontaneous nonmucoid variants, or sap (suppressor of alginate production) mutants, of PDO300 were isolated under low oxygen tension. About 40% of the sap mutants were rescued by a plasmid carrying algT/U (Group A). The remaining sap mutants were not (Group B). The members of Group B fall into two subsets: one similar to PAO1, and another comparable to PDO300. Sequence analysis of the algT/U and mucA genes in Group A shows that mucA22 is intact, whereas algT/U contains mutations. Genetic complementation and sequencing of one Group B sap mutant, sap22, revealed that the nonmucoid phenotype was due to the presence of a mutation in PA3257. PA3257 encodes a putative periplasmic protease. Mutation of PA3257 resulted in decreased algT/U expression. Thus, inhibition of algT/U is a primary mechanism for alginate synthesis suppression.
► We screened for genes involved in alginate production. ► Multiple pathways are involved in mucoid to nonmucoid reversion. ► Reversion is in part attributed to loss of AlgT/U and AlgO function. ► AlgT/U and AlgO positively regulate alginate production. |
doi_str_mv | 10.1016/j.gene.2011.11.005 |
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► We screened for genes involved in alginate production. ► Multiple pathways are involved in mucoid to nonmucoid reversion. ► Reversion is in part attributed to loss of AlgT/U and AlgO function. ► AlgT/U and AlgO positively regulate alginate production.</description><identifier>ISSN: 0378-1119</identifier><identifier>EISSN: 1879-0038</identifier><identifier>DOI: 10.1016/j.gene.2011.11.005</identifier><identifier>PMID: 22088575</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Alginate ; Alginates ; Alginates - metabolism ; alleles ; Amino Acid Sequence ; bacteria ; Bacterial Outer Membrane Proteins ; Bacterial Outer Membrane Proteins - genetics ; Bacterial Outer Membrane Proteins - metabolism ; Bacterial Proteins ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Base Sequence ; beta-Lactamases ; beta-Lactamases - genetics ; beta-Lactamases - metabolism ; Biosynthetic genes ; Cystic fibrosis ; DNA Transposable Elements ; drug effects ; Exopolysaccharide ; Gene Expression Regulation, Bacterial ; genetic complementation ; Genetic Complementation Test ; genetics ; Glucuronic Acid ; Glucuronic Acid - metabolism ; Hexuronic Acids ; Hexuronic Acids - metabolism ; loci ; metabolism ; Microbial Sensitivity Tests ; Molecular Sequence Data ; morbidity ; mortality ; mutants ; Mutation ; oxygen ; PalgT/algU ; pathogens ; patients ; Peptide Hydrolases ; Peptide Hydrolases - genetics ; Peptide Hydrolases - metabolism ; phenotype ; plasmids ; proteinases ; Pseudomonas aeruginosa ; Pseudomonas aeruginosa - drug effects ; Pseudomonas aeruginosa - genetics ; Pseudomonas aeruginosa - metabolism ; sequence analysis ; Sigma Factor ; Sigma Factor - genetics ; Sigma Factor - metabolism</subject><ispartof>Gene, 2012-05, Vol.498 (2), p.242-253</ispartof><rights>2011</rights><rights>Copyright © 2011. Published by Elsevier B.V.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c487t-4ec3e0762dbac3f27fb22c9da4cd374357e2beb512587b99d3a7900daeec6e653</citedby><cites>FETCH-LOGICAL-c487t-4ec3e0762dbac3f27fb22c9da4cd374357e2beb512587b99d3a7900daeec6e653</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0378111911006615$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,776,780,881,3536,27903,27904,65309</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22088575$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sautter, Robert</creatorcontrib><creatorcontrib>Ramos, Damaris</creatorcontrib><creatorcontrib>Schneper, Lisa</creatorcontrib><creatorcontrib>Ciofu, Oana</creatorcontrib><creatorcontrib>Wassermann, Tina</creatorcontrib><creatorcontrib>Koh, Chong-Lek</creatorcontrib><creatorcontrib>Heydorn, Arne</creatorcontrib><creatorcontrib>Hentzer, Morton</creatorcontrib><creatorcontrib>Høiby, Niels</creatorcontrib><creatorcontrib>Kharazmi, Arsalan</creatorcontrib><creatorcontrib>Molin, Søren</creatorcontrib><creatorcontrib>DeVries, Caroline A.</creatorcontrib><creatorcontrib>Ohman, Dennis E.</creatorcontrib><creatorcontrib>Mathee, Kalai</creatorcontrib><title>A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production</title><title>Gene</title><addtitle>Gene</addtitle><description>Infection by the opportunistic pathogen Pseudomonas aeruginosa is a leading cause of morbidity and mortality seen in cystic fibrosis (CF) patients. This is mainly due to the genotypic and phenotypic changes of the bacteria that cause conversion from a typical nonmucoid to a mucoid form in the CF lung. Mucoid conversion is indicative of overproduction of a capsule-like polysaccharide called alginate. The alginate-overproducing (Alg+) mucoid phenotype seen in the CF isolates is extremely unstable. Low oxygen tension growth of mucoid variants readily selects for nonmucoid variants. The switching off mechanism has been mapped to the algT/U locus, and the molecular basis for this conversion was partially attributed to mutations in the algT/U gene itself. To further characterize molecular changes resulting in the unstable phenotype, an isogenic PAO1 derivative that is constitutively Alg+ due to the replacement of the mucA with mucA22 (PDO300) was used. The mucA22 allele is common in mucoid CF isolates. Thirty-four spontaneous nonmucoid variants, or sap (suppressor of alginate production) mutants, of PDO300 were isolated under low oxygen tension. About 40% of the sap mutants were rescued by a plasmid carrying algT/U (Group A). The remaining sap mutants were not (Group B). The members of Group B fall into two subsets: one similar to PAO1, and another comparable to PDO300. Sequence analysis of the algT/U and mucA genes in Group A shows that mucA22 is intact, whereas algT/U contains mutations. Genetic complementation and sequencing of one Group B sap mutant, sap22, revealed that the nonmucoid phenotype was due to the presence of a mutation in PA3257. PA3257 encodes a putative periplasmic protease. Mutation of PA3257 resulted in decreased algT/U expression. Thus, inhibition of algT/U is a primary mechanism for alginate synthesis suppression.
► We screened for genes involved in alginate production. ► Multiple pathways are involved in mucoid to nonmucoid reversion. ► Reversion is in part attributed to loss of AlgT/U and AlgO function. ► AlgT/U and AlgO positively regulate alginate production.</description><subject>Alginate</subject><subject>Alginates</subject><subject>Alginates - metabolism</subject><subject>alleles</subject><subject>Amino Acid Sequence</subject><subject>bacteria</subject><subject>Bacterial Outer Membrane Proteins</subject><subject>Bacterial Outer Membrane Proteins - genetics</subject><subject>Bacterial Outer Membrane Proteins - metabolism</subject><subject>Bacterial Proteins</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Base Sequence</subject><subject>beta-Lactamases</subject><subject>beta-Lactamases - genetics</subject><subject>beta-Lactamases - metabolism</subject><subject>Biosynthetic genes</subject><subject>Cystic fibrosis</subject><subject>DNA Transposable Elements</subject><subject>drug effects</subject><subject>Exopolysaccharide</subject><subject>Gene Expression Regulation, Bacterial</subject><subject>genetic complementation</subject><subject>Genetic Complementation Test</subject><subject>genetics</subject><subject>Glucuronic Acid</subject><subject>Glucuronic Acid - metabolism</subject><subject>Hexuronic Acids</subject><subject>Hexuronic Acids - metabolism</subject><subject>loci</subject><subject>metabolism</subject><subject>Microbial Sensitivity Tests</subject><subject>Molecular Sequence Data</subject><subject>morbidity</subject><subject>mortality</subject><subject>mutants</subject><subject>Mutation</subject><subject>oxygen</subject><subject>PalgT/algU</subject><subject>pathogens</subject><subject>patients</subject><subject>Peptide Hydrolases</subject><subject>Peptide Hydrolases - genetics</subject><subject>Peptide Hydrolases - metabolism</subject><subject>phenotype</subject><subject>plasmids</subject><subject>proteinases</subject><subject>Pseudomonas aeruginosa</subject><subject>Pseudomonas aeruginosa - drug effects</subject><subject>Pseudomonas aeruginosa - genetics</subject><subject>Pseudomonas aeruginosa - metabolism</subject><subject>sequence analysis</subject><subject>Sigma Factor</subject><subject>Sigma Factor - genetics</subject><subject>Sigma Factor - metabolism</subject><issn>0378-1119</issn><issn>1879-0038</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kd9qFDEUxoModlt9AS8kd_ZmtknmTxIQYSlahYJetNchk5zZZp1JxiSztC_gc5tla9GbhgOBnN_3cXI-hN5RsqaEdhe79RY8rBmhdF2KkPYFWlHBZUVILV6iFam5qCil8gSdprQj5bQte41OGCNCtLxdod8bbMI0j3CPp2XMboQ9jFjnrM1PHDz-kWCxYQpeJ6whLlvnQ9JYj9ubi1sM93OElFwBtbd4c3zVJru9yw-49Ipnws7jfAd4DCnhMBzEzusMeI7BLgUO_g16NegxwdvH-wzdfvl8c_m1uv5-9e1yc12ZRvBcNWBqILxjttemHhgfesaMtLoxtuZN3XJgPfQtZa3gvZS21lwSYjWA6aBr6zP06eg7L_0E1oDPUY9qjm7S8UEF7dT_He_u1DbsVSM70UlZDD48GsTwa4GU1eSSgXHUHsKSlGyEpIQwXsjzZ0nacUZaKQQpKDuiJpYVRRieBqJEHaJWO3WIWh2iVqVKjkX0_t-vPEn-ZluAj0cAykL3DqJKxoE3YF0Ek5UN7jn_P8Frvmk</recordid><startdate>20120501</startdate><enddate>20120501</enddate><creator>Sautter, Robert</creator><creator>Ramos, Damaris</creator><creator>Schneper, Lisa</creator><creator>Ciofu, Oana</creator><creator>Wassermann, Tina</creator><creator>Koh, Chong-Lek</creator><creator>Heydorn, Arne</creator><creator>Hentzer, Morton</creator><creator>Høiby, Niels</creator><creator>Kharazmi, Arsalan</creator><creator>Molin, Søren</creator><creator>DeVries, Caroline A.</creator><creator>Ohman, Dennis E.</creator><creator>Mathee, Kalai</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7S9</scope><scope>L.6</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20120501</creationdate><title>A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production</title><author>Sautter, Robert ; Ramos, Damaris ; Schneper, Lisa ; Ciofu, Oana ; Wassermann, Tina ; Koh, Chong-Lek ; Heydorn, Arne ; Hentzer, Morton ; Høiby, Niels ; Kharazmi, Arsalan ; Molin, Søren ; DeVries, Caroline A. ; Ohman, Dennis E. ; Mathee, Kalai</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c487t-4ec3e0762dbac3f27fb22c9da4cd374357e2beb512587b99d3a7900daeec6e653</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Alginate</topic><topic>Alginates</topic><topic>Alginates - metabolism</topic><topic>alleles</topic><topic>Amino Acid Sequence</topic><topic>bacteria</topic><topic>Bacterial Outer Membrane Proteins</topic><topic>Bacterial Outer Membrane Proteins - genetics</topic><topic>Bacterial Outer Membrane Proteins - metabolism</topic><topic>Bacterial Proteins</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Base Sequence</topic><topic>beta-Lactamases</topic><topic>beta-Lactamases - genetics</topic><topic>beta-Lactamases - metabolism</topic><topic>Biosynthetic genes</topic><topic>Cystic fibrosis</topic><topic>DNA Transposable Elements</topic><topic>drug effects</topic><topic>Exopolysaccharide</topic><topic>Gene Expression Regulation, Bacterial</topic><topic>genetic complementation</topic><topic>Genetic Complementation Test</topic><topic>genetics</topic><topic>Glucuronic Acid</topic><topic>Glucuronic Acid - metabolism</topic><topic>Hexuronic Acids</topic><topic>Hexuronic Acids - metabolism</topic><topic>loci</topic><topic>metabolism</topic><topic>Microbial Sensitivity Tests</topic><topic>Molecular Sequence Data</topic><topic>morbidity</topic><topic>mortality</topic><topic>mutants</topic><topic>Mutation</topic><topic>oxygen</topic><topic>PalgT/algU</topic><topic>pathogens</topic><topic>patients</topic><topic>Peptide Hydrolases</topic><topic>Peptide Hydrolases - genetics</topic><topic>Peptide Hydrolases - metabolism</topic><topic>phenotype</topic><topic>plasmids</topic><topic>proteinases</topic><topic>Pseudomonas aeruginosa</topic><topic>Pseudomonas aeruginosa - drug effects</topic><topic>Pseudomonas aeruginosa - genetics</topic><topic>Pseudomonas aeruginosa - metabolism</topic><topic>sequence analysis</topic><topic>Sigma Factor</topic><topic>Sigma Factor - genetics</topic><topic>Sigma Factor - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sautter, Robert</creatorcontrib><creatorcontrib>Ramos, Damaris</creatorcontrib><creatorcontrib>Schneper, Lisa</creatorcontrib><creatorcontrib>Ciofu, Oana</creatorcontrib><creatorcontrib>Wassermann, Tina</creatorcontrib><creatorcontrib>Koh, Chong-Lek</creatorcontrib><creatorcontrib>Heydorn, Arne</creatorcontrib><creatorcontrib>Hentzer, Morton</creatorcontrib><creatorcontrib>Høiby, Niels</creatorcontrib><creatorcontrib>Kharazmi, Arsalan</creatorcontrib><creatorcontrib>Molin, Søren</creatorcontrib><creatorcontrib>DeVries, Caroline A.</creatorcontrib><creatorcontrib>Ohman, Dennis E.</creatorcontrib><creatorcontrib>Mathee, Kalai</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Gene</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sautter, Robert</au><au>Ramos, Damaris</au><au>Schneper, Lisa</au><au>Ciofu, Oana</au><au>Wassermann, Tina</au><au>Koh, Chong-Lek</au><au>Heydorn, Arne</au><au>Hentzer, Morton</au><au>Høiby, Niels</au><au>Kharazmi, Arsalan</au><au>Molin, Søren</au><au>DeVries, Caroline A.</au><au>Ohman, Dennis E.</au><au>Mathee, Kalai</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production</atitle><jtitle>Gene</jtitle><addtitle>Gene</addtitle><date>2012-05-01</date><risdate>2012</risdate><volume>498</volume><issue>2</issue><spage>242</spage><epage>253</epage><pages>242-253</pages><issn>0378-1119</issn><eissn>1879-0038</eissn><abstract>Infection by the opportunistic pathogen Pseudomonas aeruginosa is a leading cause of morbidity and mortality seen in cystic fibrosis (CF) patients. This is mainly due to the genotypic and phenotypic changes of the bacteria that cause conversion from a typical nonmucoid to a mucoid form in the CF lung. Mucoid conversion is indicative of overproduction of a capsule-like polysaccharide called alginate. The alginate-overproducing (Alg+) mucoid phenotype seen in the CF isolates is extremely unstable. Low oxygen tension growth of mucoid variants readily selects for nonmucoid variants. The switching off mechanism has been mapped to the algT/U locus, and the molecular basis for this conversion was partially attributed to mutations in the algT/U gene itself. To further characterize molecular changes resulting in the unstable phenotype, an isogenic PAO1 derivative that is constitutively Alg+ due to the replacement of the mucA with mucA22 (PDO300) was used. The mucA22 allele is common in mucoid CF isolates. Thirty-four spontaneous nonmucoid variants, or sap (suppressor of alginate production) mutants, of PDO300 were isolated under low oxygen tension. About 40% of the sap mutants were rescued by a plasmid carrying algT/U (Group A). The remaining sap mutants were not (Group B). The members of Group B fall into two subsets: one similar to PAO1, and another comparable to PDO300. Sequence analysis of the algT/U and mucA genes in Group A shows that mucA22 is intact, whereas algT/U contains mutations. Genetic complementation and sequencing of one Group B sap mutant, sap22, revealed that the nonmucoid phenotype was due to the presence of a mutation in PA3257. PA3257 encodes a putative periplasmic protease. Mutation of PA3257 resulted in decreased algT/U expression. Thus, inhibition of algT/U is a primary mechanism for alginate synthesis suppression.
► We screened for genes involved in alginate production. ► Multiple pathways are involved in mucoid to nonmucoid reversion. ► Reversion is in part attributed to loss of AlgT/U and AlgO function. ► AlgT/U and AlgO positively regulate alginate production.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>22088575</pmid><doi>10.1016/j.gene.2011.11.005</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alginate Alginates Alginates - metabolism alleles Amino Acid Sequence bacteria Bacterial Outer Membrane Proteins Bacterial Outer Membrane Proteins - genetics Bacterial Outer Membrane Proteins - metabolism Bacterial Proteins Bacterial Proteins - genetics Bacterial Proteins - metabolism Base Sequence beta-Lactamases beta-Lactamases - genetics beta-Lactamases - metabolism Biosynthetic genes Cystic fibrosis DNA Transposable Elements drug effects Exopolysaccharide Gene Expression Regulation, Bacterial genetic complementation Genetic Complementation Test genetics Glucuronic Acid Glucuronic Acid - metabolism Hexuronic Acids Hexuronic Acids - metabolism loci metabolism Microbial Sensitivity Tests Molecular Sequence Data morbidity mortality mutants Mutation oxygen PalgT/algU pathogens patients Peptide Hydrolases Peptide Hydrolases - genetics Peptide Hydrolases - metabolism phenotype plasmids proteinases Pseudomonas aeruginosa Pseudomonas aeruginosa - drug effects Pseudomonas aeruginosa - genetics Pseudomonas aeruginosa - metabolism sequence analysis Sigma Factor Sigma Factor - genetics Sigma Factor - metabolism |
title | A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production |
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