The Methylcytosine Dioxygenase Tet2 Promotes DNA Demethylation and Activation of Cytokine Gene Expression in T Cells

Epigenetic regulation of lineage-specific genes is important for the differentiation and function of T cells. Ten-eleven translocation (Tet) proteins catalyze 5-methylcytosine (5mC) conversion to 5-hydroxymethylcytosine (5hmC) to mediate DNA demethylation. However, the roles of Tet proteins in the i...

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Veröffentlicht in:Immunity (Cambridge, Mass.) Mass.), 2015-04, Vol.42 (4), p.613-626
Hauptverfasser: Ichiyama, Kenji, Chen, Tingting, Wang, Xiaohu, Yan, Xiaowei, Kim, Byung-Seok, Tanaka, Shinya, Ndiaye-Lobry, Delphine, Deng, Yuhua, Zou, Yanli, Zheng, Pan, Tian, Qiang, Aifantis, Iannis, Wei, Lai, Dong, Chen
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container_end_page 626
container_issue 4
container_start_page 613
container_title Immunity (Cambridge, Mass.)
container_volume 42
creator Ichiyama, Kenji
Chen, Tingting
Wang, Xiaohu
Yan, Xiaowei
Kim, Byung-Seok
Tanaka, Shinya
Ndiaye-Lobry, Delphine
Deng, Yuhua
Zou, Yanli
Zheng, Pan
Tian, Qiang
Aifantis, Iannis
Wei, Lai
Dong, Chen
description Epigenetic regulation of lineage-specific genes is important for the differentiation and function of T cells. Ten-eleven translocation (Tet) proteins catalyze 5-methylcytosine (5mC) conversion to 5-hydroxymethylcytosine (5hmC) to mediate DNA demethylation. However, the roles of Tet proteins in the immune response are unknown. Here, we characterized the genome-wide distribution of 5hmC in CD4+ T cells and found that 5hmC marks putative regulatory elements in signature genes associated with effector cell differentiation. Moreover, Tet2 protein was recruited to 5hmC-containing regions, dependent on lineage-specific transcription factors. Deletion of Tet2 in T cells decreased their cytokine expression, associated with reduced p300 recruitment. In vivo, Tet2 plays a critical role in the control of cytokine gene expression in autoimmune disease. Collectively, our findings suggest that Tet2 promotes DNA demethylation and activation of cytokine gene expression in T cells. [Display omitted] •5hmC marks transcriptional regulatory regions of lineage-specific signature genes•Tet2 and key transcription factors cooperatively regulate signature gene expression•Tet2 promotes the signature cytokine expression in Th1 and Th17 cells in vitro•Tet2 controls cytokine production by T cells in autoimmune disease Tet proteins are methylcytosine dioxygenases that convert methyalated DNA (5mC) to hydroxymethylated DNA (5hmC). Dong and colleagues generate a genome-wide 5hmC map in T helper (Th) cells and demonstrate that Tet2-mediated DNA demethylation plays a crucial role in control of signature cytokine expression in Th cells.
doi_str_mv 10.1016/j.immuni.2015.03.005
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Ten-eleven translocation (Tet) proteins catalyze 5-methylcytosine (5mC) conversion to 5-hydroxymethylcytosine (5hmC) to mediate DNA demethylation. However, the roles of Tet proteins in the immune response are unknown. Here, we characterized the genome-wide distribution of 5hmC in CD4+ T cells and found that 5hmC marks putative regulatory elements in signature genes associated with effector cell differentiation. Moreover, Tet2 protein was recruited to 5hmC-containing regions, dependent on lineage-specific transcription factors. Deletion of Tet2 in T cells decreased their cytokine expression, associated with reduced p300 recruitment. In vivo, Tet2 plays a critical role in the control of cytokine gene expression in autoimmune disease. Collectively, our findings suggest that Tet2 promotes DNA demethylation and activation of cytokine gene expression in T cells. [Display omitted] •5hmC marks transcriptional regulatory regions of lineage-specific signature genes•Tet2 and key transcription factors cooperatively regulate signature gene expression•Tet2 promotes the signature cytokine expression in Th1 and Th17 cells in vitro•Tet2 controls cytokine production by T cells in autoimmune disease Tet proteins are methylcytosine dioxygenases that convert methyalated DNA (5mC) to hydroxymethylated DNA (5hmC). 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All rights reserved.</rights><rights>Copyright Elsevier Limited Apr 21, 2015</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c594t-1e77a116eba8ebfcfc798db4eb9028c62802e62946da8720f0cb92fd53daccdd3</citedby><cites>FETCH-LOGICAL-c594t-1e77a116eba8ebfcfc798db4eb9028c62802e62946da8720f0cb92fd53daccdd3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1074761315001193$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25862091$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ichiyama, Kenji</creatorcontrib><creatorcontrib>Chen, Tingting</creatorcontrib><creatorcontrib>Wang, Xiaohu</creatorcontrib><creatorcontrib>Yan, Xiaowei</creatorcontrib><creatorcontrib>Kim, Byung-Seok</creatorcontrib><creatorcontrib>Tanaka, Shinya</creatorcontrib><creatorcontrib>Ndiaye-Lobry, Delphine</creatorcontrib><creatorcontrib>Deng, Yuhua</creatorcontrib><creatorcontrib>Zou, Yanli</creatorcontrib><creatorcontrib>Zheng, Pan</creatorcontrib><creatorcontrib>Tian, Qiang</creatorcontrib><creatorcontrib>Aifantis, Iannis</creatorcontrib><creatorcontrib>Wei, Lai</creatorcontrib><creatorcontrib>Dong, Chen</creatorcontrib><title>The Methylcytosine Dioxygenase Tet2 Promotes DNA Demethylation and Activation of Cytokine Gene Expression in T Cells</title><title>Immunity (Cambridge, Mass.)</title><addtitle>Immunity</addtitle><description>Epigenetic regulation of lineage-specific genes is important for the differentiation and function of T cells. Ten-eleven translocation (Tet) proteins catalyze 5-methylcytosine (5mC) conversion to 5-hydroxymethylcytosine (5hmC) to mediate DNA demethylation. However, the roles of Tet proteins in the immune response are unknown. Here, we characterized the genome-wide distribution of 5hmC in CD4+ T cells and found that 5hmC marks putative regulatory elements in signature genes associated with effector cell differentiation. Moreover, Tet2 protein was recruited to 5hmC-containing regions, dependent on lineage-specific transcription factors. Deletion of Tet2 in T cells decreased their cytokine expression, associated with reduced p300 recruitment. In vivo, Tet2 plays a critical role in the control of cytokine gene expression in autoimmune disease. Collectively, our findings suggest that Tet2 promotes DNA demethylation and activation of cytokine gene expression in T cells. [Display omitted] •5hmC marks transcriptional regulatory regions of lineage-specific signature genes•Tet2 and key transcription factors cooperatively regulate signature gene expression•Tet2 promotes the signature cytokine expression in Th1 and Th17 cells in vitro•Tet2 controls cytokine production by T cells in autoimmune disease Tet proteins are methylcytosine dioxygenases that convert methyalated DNA (5mC) to hydroxymethylated DNA (5hmC). 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Ten-eleven translocation (Tet) proteins catalyze 5-methylcytosine (5mC) conversion to 5-hydroxymethylcytosine (5hmC) to mediate DNA demethylation. However, the roles of Tet proteins in the immune response are unknown. Here, we characterized the genome-wide distribution of 5hmC in CD4+ T cells and found that 5hmC marks putative regulatory elements in signature genes associated with effector cell differentiation. Moreover, Tet2 protein was recruited to 5hmC-containing regions, dependent on lineage-specific transcription factors. Deletion of Tet2 in T cells decreased their cytokine expression, associated with reduced p300 recruitment. In vivo, Tet2 plays a critical role in the control of cytokine gene expression in autoimmune disease. Collectively, our findings suggest that Tet2 promotes DNA demethylation and activation of cytokine gene expression in T cells. [Display omitted] •5hmC marks transcriptional regulatory regions of lineage-specific signature genes•Tet2 and key transcription factors cooperatively regulate signature gene expression•Tet2 promotes the signature cytokine expression in Th1 and Th17 cells in vitro•Tet2 controls cytokine production by T cells in autoimmune disease Tet proteins are methylcytosine dioxygenases that convert methyalated DNA (5mC) to hydroxymethylated DNA (5hmC). Dong and colleagues generate a genome-wide 5hmC map in T helper (Th) cells and demonstrate that Tet2-mediated DNA demethylation plays a crucial role in control of signature cytokine expression in Th cells.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>25862091</pmid><doi>10.1016/j.immuni.2015.03.005</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record>
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subjects 5-Methylcytosine - analogs & derivatives
Animals
Binding sites
Cell Differentiation
Cytokines - biosynthesis
Cytokines - immunology
Cytosine - analogs & derivatives
Cytosine - immunology
Cytosine - metabolism
Deoxyribonucleic acid
DNA
DNA - immunology
DNA - metabolism
DNA Methylation
DNA-Binding Proteins - genetics
DNA-Binding Proteins - immunology
E1A-Associated p300 Protein - genetics
E1A-Associated p300 Protein - immunology
Epigenesis, Genetic - immunology
Epigenetics
Experiments
Gene expression
Gene Expression Regulation
Genetic testing
Genome
Genomes
Humans
Lymphocytes
Mice
Mice, Transgenic
Proto-Oncogene Proteins - genetics
Proto-Oncogene Proteins - immunology
Rodents
STAT4 Transcription Factor - genetics
STAT4 Transcription Factor - immunology
T-Box Domain Proteins - genetics
T-Box Domain Proteins - immunology
Th1 Cells - cytology
Th1 Cells - enzymology
Th1 Cells - immunology
Th17 Cells - cytology
Th17 Cells - enzymology
Th17 Cells - immunology
Transcription factors
title The Methylcytosine Dioxygenase Tet2 Promotes DNA Demethylation and Activation of Cytokine Gene Expression in T Cells
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