PhyloToAST: Bioinformatics tools for species-level analysis and visualization of complex microbial datasets

The 16S rRNA gene is widely used for taxonomic profiling of microbial ecosystems; and recent advances in sequencing chemistry have allowed extremely large numbers of sequences to be generated from minimal amounts of biological samples. Analysis speed and resolution of data to species-level taxa are...

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Veröffentlicht in:	Scientific reports 2016-06, Vol.6 (1), p.29123-29123, Article 29123
Hauptverfasser:	Dabdoub, Shareef M., Fellows, Megan L., Paropkari, Akshay D., Mason, Matthew R., Huja, Sarandeep S., Tsigarida, Alexandra A., Kumar, Purnima S.
Format:	Artikel
Sprache:	eng
Schlagworte:	45/23 631/114 631/326 Bacteria - classification Bacteria - genetics Biodiversity Bioinformatics Biological samples Case studies Computational Biology Dentistry Discriminant analysis Gum disease High-Throughput Nucleotide Sequencing Humanities and Social Sciences Microbiota - genetics multidisciplinary Pathogens Phylogenetics Phylogeny RNA, Ribosomal, 16S - genetics Science Software Taxa Taxonomy Visualization
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