nido-Dicarbaborate Induces Potent and Selective Inhibition of Cyclooxygenase-2
Carbaboranes are increasingly studied as pharmacophores, particularly as replacements for aromatic systems. However, especially ortho‐carbaborane is prone to degradation of the cluster, which hampers biological application. This study demonstrates that deboronation of the cluster may not only lead t...
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creator | Neumann, Wilma Xu, Shu Sárosi, Menyhárt B. Scholz, Matthias S. Crews, Brenda C. Ghebreselasie, Kebreab Banerjee, Surajit Marnett, Lawrence J. Hey-Hawkins, Evamarie |
description | Carbaboranes are increasingly studied as pharmacophores, particularly as replacements for aromatic systems. However, especially ortho‐carbaborane is prone to degradation of the cluster, which hampers biological application. This study demonstrates that deboronation of the cluster may not only lead to a more active analogue, but can also improve the solubility and stability of a carbaborane‐containing inhibitor. Notably, introduction of a nido‐dicarbaborate cluster into the cyclooxygenase (COX) inhibitor indomethacin results in remarkably increased inhibitory potency and selectivity for COX‐2 relative to the respective phenyl analogue. The first crystal structure of a carbaborane‐containing inhibitor bound to COX‐2 further reveals a novel binding mode for the inhibitor that is strikingly different from that of indomethacin. These results indicate that nido‐dicarbaborate is a promising pharmacophore that exhibits properties which are also highly beneficial for its introduction into other inhibitor classes.
Potency boost: Replacement of a phenyl moiety in indomethacin with a nido‐dicarbaborate group results in a compound with a novel binding mode and markedly increased inhibitory activity and selectivity for COX‐2, with a concomitant increase in stability and water solubility, while maintaining strong hydrophobic interactions in the binding site of the enzyme. This shows nido‐dicarbaborate to be a promising pharmacophore for a variety of inhibitors. |
doi_str_mv | 10.1002/cmdc.201500199 |
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Potency boost: Replacement of a phenyl moiety in indomethacin with a nido‐dicarbaborate group results in a compound with a novel binding mode and markedly increased inhibitory activity and selectivity for COX‐2, with a concomitant increase in stability and water solubility, while maintaining strong hydrophobic interactions in the binding site of the enzyme. This shows nido‐dicarbaborate to be a promising pharmacophore for a variety of inhibitors.</description><identifier>ISSN: 1860-7179</identifier><identifier>EISSN: 1860-7187</identifier><identifier>DOI: 10.1002/cmdc.201500199</identifier><identifier>PMID: 26088701</identifier><language>eng</language><publisher>Germany: Blackwell Publishing Ltd</publisher><subject>Animals ; BASIC BIOLOGICAL SCIENCES ; Binding Sites - drug effects ; Boranes - chemistry ; Boranes - pharmacology ; carbaboranes ; carboranes ; Crystal structure ; Cyclooxygenase 2 - metabolism ; Cyclooxygenase 2 Inhibitors - chemistry ; Cyclooxygenase 2 Inhibitors - pharmacology ; cyclooxygenases ; Dose-Response Relationship, Drug ; drug design ; enzymes ; Indomethacin - chemistry ; Indomethacin - pharmacology ; inhibitors ; INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY ; Mice ; Models, Molecular ; Molecular Structure ; selectivity ; Sheep ; Solubility ; Structure-Activity Relationship</subject><ispartof>ChemMedChem, 2016-01, Vol.11 (2), p.175-178</ispartof><rights>2016 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim</rights><rights>2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.</rights><rights>2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c6699-ef81051f2792861ac321a272686b726d1737f726086e1670ad215c2fa6bf71b73</citedby><cites>FETCH-LOGICAL-c6699-ef81051f2792861ac321a272686b726d1737f726086e1670ad215c2fa6bf71b73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fcmdc.201500199$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fcmdc.201500199$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,315,781,785,886,1418,27929,27930,45579,45580</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26088701$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/servlets/purl/1236266$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Neumann, Wilma</creatorcontrib><creatorcontrib>Xu, Shu</creatorcontrib><creatorcontrib>Sárosi, Menyhárt B.</creatorcontrib><creatorcontrib>Scholz, Matthias S.</creatorcontrib><creatorcontrib>Crews, Brenda C.</creatorcontrib><creatorcontrib>Ghebreselasie, Kebreab</creatorcontrib><creatorcontrib>Banerjee, Surajit</creatorcontrib><creatorcontrib>Marnett, Lawrence J.</creatorcontrib><creatorcontrib>Hey-Hawkins, Evamarie</creatorcontrib><creatorcontrib>Argonne National Laboratory (ANL), Argonne, IL (United States)</creatorcontrib><title>nido-Dicarbaborate Induces Potent and Selective Inhibition of Cyclooxygenase-2</title><title>ChemMedChem</title><addtitle>ChemMedChem</addtitle><description>Carbaboranes are increasingly studied as pharmacophores, particularly as replacements for aromatic systems. However, especially ortho‐carbaborane is prone to degradation of the cluster, which hampers biological application. This study demonstrates that deboronation of the cluster may not only lead to a more active analogue, but can also improve the solubility and stability of a carbaborane‐containing inhibitor. Notably, introduction of a nido‐dicarbaborate cluster into the cyclooxygenase (COX) inhibitor indomethacin results in remarkably increased inhibitory potency and selectivity for COX‐2 relative to the respective phenyl analogue. The first crystal structure of a carbaborane‐containing inhibitor bound to COX‐2 further reveals a novel binding mode for the inhibitor that is strikingly different from that of indomethacin. These results indicate that nido‐dicarbaborate is a promising pharmacophore that exhibits properties which are also highly beneficial for its introduction into other inhibitor classes.
Potency boost: Replacement of a phenyl moiety in indomethacin with a nido‐dicarbaborate group results in a compound with a novel binding mode and markedly increased inhibitory activity and selectivity for COX‐2, with a concomitant increase in stability and water solubility, while maintaining strong hydrophobic interactions in the binding site of the enzyme. This shows nido‐dicarbaborate to be a promising pharmacophore for a variety of inhibitors.</description><subject>Animals</subject><subject>BASIC BIOLOGICAL SCIENCES</subject><subject>Binding Sites - drug effects</subject><subject>Boranes - chemistry</subject><subject>Boranes - pharmacology</subject><subject>carbaboranes</subject><subject>carboranes</subject><subject>Crystal structure</subject><subject>Cyclooxygenase 2 - metabolism</subject><subject>Cyclooxygenase 2 Inhibitors - chemistry</subject><subject>Cyclooxygenase 2 Inhibitors - pharmacology</subject><subject>cyclooxygenases</subject><subject>Dose-Response Relationship, Drug</subject><subject>drug design</subject><subject>enzymes</subject><subject>Indomethacin - chemistry</subject><subject>Indomethacin - pharmacology</subject><subject>inhibitors</subject><subject>INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY</subject><subject>Mice</subject><subject>Models, Molecular</subject><subject>Molecular Structure</subject><subject>selectivity</subject><subject>Sheep</subject><subject>Solubility</subject><subject>Structure-Activity Relationship</subject><issn>1860-7179</issn><issn>1860-7187</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFUU1P3DAUtFARUMq1xyoq52z9nI3tXCpVoV2oKFTiqzfLcRzWNGtT20vZf19HgYieuNiW3sx43gxC7wHPAGPySa1aNSMYSoyhqrbQHnCKcwacvZnerNpFb0O4w3g-58B30C6hmHOGYQ-dWdO6_Mgo6RvZOC-jzk5su1Y6ZD9d1DZm0rbZhe61iuZhGC5NY6JxNnNdVm9U79zj5lZbGXRO3qHtTvZBHzzd--jq29fL-jg_PV-c1F9Oc0VpVeW644BL6AirCKcgVUFAEkYop006W2AF69jgkmqgDMuWQKlIJ2nTMWhYsY8-j7r362alW5V8etmLe29W0m-Ek0b8P7FmKW7dg5hXKSjKk8DHUcCFaERQJmq1VM7atKYAUlBCaQIdPv3i3Z-1DlHcubW3aTEBrGS8TDkPUrMRpbwLwetusgFYDCWJoSQxlZQIH16an-DPrSRANQL-ml5vXpET9Y-j-qV4PnJNiPpx4kr_W9CUailuzhYCX_86hsX3UhTFP7UGrEE</recordid><startdate>20160119</startdate><enddate>20160119</enddate><creator>Neumann, Wilma</creator><creator>Xu, Shu</creator><creator>Sárosi, Menyhárt B.</creator><creator>Scholz, Matthias S.</creator><creator>Crews, Brenda C.</creator><creator>Ghebreselasie, Kebreab</creator><creator>Banerjee, Surajit</creator><creator>Marnett, Lawrence J.</creator><creator>Hey-Hawkins, Evamarie</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><general>ChemPubSoc Europe</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7TK</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>OIOZB</scope><scope>OTOTI</scope><scope>5PM</scope></search><sort><creationdate>20160119</creationdate><title>nido-Dicarbaborate Induces Potent and Selective Inhibition of Cyclooxygenase-2</title><author>Neumann, Wilma ; Xu, Shu ; Sárosi, Menyhárt B. ; Scholz, Matthias S. ; Crews, Brenda C. ; Ghebreselasie, Kebreab ; Banerjee, Surajit ; Marnett, Lawrence J. ; Hey-Hawkins, Evamarie</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c6699-ef81051f2792861ac321a272686b726d1737f726086e1670ad215c2fa6bf71b73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Animals</topic><topic>BASIC BIOLOGICAL SCIENCES</topic><topic>Binding Sites - drug effects</topic><topic>Boranes - chemistry</topic><topic>Boranes - pharmacology</topic><topic>carbaboranes</topic><topic>carboranes</topic><topic>Crystal structure</topic><topic>Cyclooxygenase 2 - metabolism</topic><topic>Cyclooxygenase 2 Inhibitors - chemistry</topic><topic>Cyclooxygenase 2 Inhibitors - pharmacology</topic><topic>cyclooxygenases</topic><topic>Dose-Response Relationship, Drug</topic><topic>drug design</topic><topic>enzymes</topic><topic>Indomethacin - chemistry</topic><topic>Indomethacin - pharmacology</topic><topic>inhibitors</topic><topic>INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY</topic><topic>Mice</topic><topic>Models, Molecular</topic><topic>Molecular Structure</topic><topic>selectivity</topic><topic>Sheep</topic><topic>Solubility</topic><topic>Structure-Activity Relationship</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Neumann, Wilma</creatorcontrib><creatorcontrib>Xu, Shu</creatorcontrib><creatorcontrib>Sárosi, Menyhárt B.</creatorcontrib><creatorcontrib>Scholz, Matthias S.</creatorcontrib><creatorcontrib>Crews, Brenda C.</creatorcontrib><creatorcontrib>Ghebreselasie, Kebreab</creatorcontrib><creatorcontrib>Banerjee, Surajit</creatorcontrib><creatorcontrib>Marnett, Lawrence J.</creatorcontrib><creatorcontrib>Hey-Hawkins, Evamarie</creatorcontrib><creatorcontrib>Argonne National Laboratory (ANL), Argonne, IL (United States)</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>OSTI.GOV - Hybrid</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>ChemMedChem</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Neumann, Wilma</au><au>Xu, Shu</au><au>Sárosi, Menyhárt B.</au><au>Scholz, Matthias S.</au><au>Crews, Brenda C.</au><au>Ghebreselasie, Kebreab</au><au>Banerjee, Surajit</au><au>Marnett, Lawrence J.</au><au>Hey-Hawkins, Evamarie</au><aucorp>Argonne National Laboratory (ANL), Argonne, IL (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>nido-Dicarbaborate Induces Potent and Selective Inhibition of Cyclooxygenase-2</atitle><jtitle>ChemMedChem</jtitle><addtitle>ChemMedChem</addtitle><date>2016-01-19</date><risdate>2016</risdate><volume>11</volume><issue>2</issue><spage>175</spage><epage>178</epage><pages>175-178</pages><issn>1860-7179</issn><eissn>1860-7187</eissn><abstract>Carbaboranes are increasingly studied as pharmacophores, particularly as replacements for aromatic systems. However, especially ortho‐carbaborane is prone to degradation of the cluster, which hampers biological application. This study demonstrates that deboronation of the cluster may not only lead to a more active analogue, but can also improve the solubility and stability of a carbaborane‐containing inhibitor. Notably, introduction of a nido‐dicarbaborate cluster into the cyclooxygenase (COX) inhibitor indomethacin results in remarkably increased inhibitory potency and selectivity for COX‐2 relative to the respective phenyl analogue. The first crystal structure of a carbaborane‐containing inhibitor bound to COX‐2 further reveals a novel binding mode for the inhibitor that is strikingly different from that of indomethacin. These results indicate that nido‐dicarbaborate is a promising pharmacophore that exhibits properties which are also highly beneficial for its introduction into other inhibitor classes.
Potency boost: Replacement of a phenyl moiety in indomethacin with a nido‐dicarbaborate group results in a compound with a novel binding mode and markedly increased inhibitory activity and selectivity for COX‐2, with a concomitant increase in stability and water solubility, while maintaining strong hydrophobic interactions in the binding site of the enzyme. This shows nido‐dicarbaborate to be a promising pharmacophore for a variety of inhibitors.</abstract><cop>Germany</cop><pub>Blackwell Publishing Ltd</pub><pmid>26088701</pmid><doi>10.1002/cmdc.201500199</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals BASIC BIOLOGICAL SCIENCES Binding Sites - drug effects Boranes - chemistry Boranes - pharmacology carbaboranes carboranes Crystal structure Cyclooxygenase 2 - metabolism Cyclooxygenase 2 Inhibitors - chemistry Cyclooxygenase 2 Inhibitors - pharmacology cyclooxygenases Dose-Response Relationship, Drug drug design enzymes Indomethacin - chemistry Indomethacin - pharmacology inhibitors INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY Mice Models, Molecular Molecular Structure selectivity Sheep Solubility Structure-Activity Relationship |
title | nido-Dicarbaborate Induces Potent and Selective Inhibition of Cyclooxygenase-2 |
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