Comparative Study of Early Cold-Regulated Proteins by Two-Dimensional Difference Gel Electrophoresis Reveals a Key Role for Phospholipase Dα1 in Mediating Cold Acclimation Signaling Pathway in Rice
To understand the early signaling steps that regulate cold responses in rice, two-dimensional difference gel electrophoresis (2-D DIGE)1 was used to study early cold-regulated proteins in rice seedlings. Using mass spectrometry, 32 spots, which represent 26 unique proteins that showed an altered exp...
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description | To understand the early signaling steps that regulate cold responses in rice, two-dimensional difference gel electrophoresis (2-D DIGE)1 was used to study early cold-regulated proteins in rice seedlings. Using mass spectrometry, 32 spots, which represent 26 unique proteins that showed an altered expression level within 5 min of cold treatment were identified. Among these proteins, Western blot analyses confirmed that the cellular phospholipase D α1 (OsPLDα1) protein level was increased as early as 1 min after cold treatment. Genetic studies showed that reducing the expression of OsPLDα1 makes rice plants more sensitive to chilling stress as well as cold acclimation increased freezing tolerance. Correspondingly, cold-regulated proteomic changes and the expression of the cold-responsive C repeat/dehydration-responsive element binding 1 (OsDREB1) family of transcription factors were inhibited in the pldα1 mutant. We also found that the expression of OsPLDα1 is directly regulated by OsDREB1A. This transcriptional regulation of OsPLDα1 could provide positive feedback regulation of the cold signal transduction pathway in rice. OsPLDα1 hydrolyzes phosphatidylcholine to produce the signal molecule phosphatidic acid (PA). By lipid-overlay assay, we demonstrated that the rice cold signaling proteins, MAP kinase 6 (OsMPK6) and OsSIZ1, bind directly to PA. Taken together, our results suggest that OsPLDα1 plays a key role in transducing cold signaling in rice by producing PA and regulating OsDREB1s' expression by OsMPK6, OsSIZ1, and possibly other PA-binding proteins. |
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Using mass spectrometry, 32 spots, which represent 26 unique proteins that showed an altered expression level within 5 min of cold treatment were identified. Among these proteins, Western blot analyses confirmed that the cellular phospholipase D α1 (OsPLDα1) protein level was increased as early as 1 min after cold treatment. Genetic studies showed that reducing the expression of OsPLDα1 makes rice plants more sensitive to chilling stress as well as cold acclimation increased freezing tolerance. Correspondingly, cold-regulated proteomic changes and the expression of the cold-responsive C repeat/dehydration-responsive element binding 1 (OsDREB1) family of transcription factors were inhibited in the pldα1 mutant. We also found that the expression of OsPLDα1 is directly regulated by OsDREB1A. This transcriptional regulation of OsPLDα1 could provide positive feedback regulation of the cold signal transduction pathway in rice. OsPLDα1 hydrolyzes phosphatidylcholine to produce the signal molecule phosphatidic acid (PA). By lipid-overlay assay, we demonstrated that the rice cold signaling proteins, MAP kinase 6 (OsMPK6) and OsSIZ1, bind directly to PA. Taken together, our results suggest that OsPLDα1 plays a key role in transducing cold signaling in rice by producing PA and regulating OsDREB1s' expression by OsMPK6, OsSIZ1, and possibly other PA-binding proteins.</description><identifier>ISSN: 1535-9476</identifier><identifier>EISSN: 1535-9484</identifier><identifier>DOI: 10.1074/mcp.M115.049759</identifier><identifier>PMID: 26747563</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Acclimatization ; Cold Temperature ; Gene Expression Regulation, Plant ; Oryza - genetics ; Oryza - growth & development ; Oryza - metabolism ; Phosphatidic Acids - metabolism ; Phospholipase D - genetics ; Phospholipase D - metabolism ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Proteomics - methods ; Signal Transduction ; Two-Dimensional Difference Gel Electrophoresis - methods</subject><ispartof>Molecular & cellular proteomics, 2016-04, Vol.15 (4), p.1397-1411</ispartof><rights>2016 © 2016 ASBMB. Currently published by Elsevier Inc; originally published by American Society for Biochemistry and Molecular Biology.</rights><rights>2016 by The American Society for Biochemistry and Molecular Biology, Inc.</rights><rights>2016 by The American Society for Biochemistry and Molecular Biology, Inc. 2016 The American Society for Biochemistry and Molecular Biology, Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4249-86f574e5002838bdc5188b53ab7f754d994fc0c386a52e81f5ca95fe886d85543</citedby><cites>FETCH-LOGICAL-c4249-86f574e5002838bdc5188b53ab7f754d994fc0c386a52e81f5ca95fe886d85543</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824863/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824863/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,315,728,781,785,886,27928,27929,53795,53797</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26747563$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Huo, Chenmin</creatorcontrib><creatorcontrib>Zhang, Baowen</creatorcontrib><creatorcontrib>Wang, Hui</creatorcontrib><creatorcontrib>Wang, Fawei</creatorcontrib><creatorcontrib>Liu, Meng</creatorcontrib><creatorcontrib>Gao, Yingjie</creatorcontrib><creatorcontrib>Zhang, Wenhua</creatorcontrib><creatorcontrib>Deng, Zhiping</creatorcontrib><creatorcontrib>Sun, Daye</creatorcontrib><creatorcontrib>Tang, Wenqiang</creatorcontrib><title>Comparative Study of Early Cold-Regulated Proteins by Two-Dimensional Difference Gel Electrophoresis Reveals a Key Role for Phospholipase Dα1 in Mediating Cold Acclimation Signaling Pathway in Rice</title><title>Molecular & cellular proteomics</title><addtitle>Mol Cell Proteomics</addtitle><description>To understand the early signaling steps that regulate cold responses in rice, two-dimensional difference gel electrophoresis (2-D DIGE)1 was used to study early cold-regulated proteins in rice seedlings. Using mass spectrometry, 32 spots, which represent 26 unique proteins that showed an altered expression level within 5 min of cold treatment were identified. Among these proteins, Western blot analyses confirmed that the cellular phospholipase D α1 (OsPLDα1) protein level was increased as early as 1 min after cold treatment. Genetic studies showed that reducing the expression of OsPLDα1 makes rice plants more sensitive to chilling stress as well as cold acclimation increased freezing tolerance. Correspondingly, cold-regulated proteomic changes and the expression of the cold-responsive C repeat/dehydration-responsive element binding 1 (OsDREB1) family of transcription factors were inhibited in the pldα1 mutant. We also found that the expression of OsPLDα1 is directly regulated by OsDREB1A. This transcriptional regulation of OsPLDα1 could provide positive feedback regulation of the cold signal transduction pathway in rice. OsPLDα1 hydrolyzes phosphatidylcholine to produce the signal molecule phosphatidic acid (PA). By lipid-overlay assay, we demonstrated that the rice cold signaling proteins, MAP kinase 6 (OsMPK6) and OsSIZ1, bind directly to PA. Taken together, our results suggest that OsPLDα1 plays a key role in transducing cold signaling in rice by producing PA and regulating OsDREB1s' expression by OsMPK6, OsSIZ1, and possibly other PA-binding proteins.</description><subject>Acclimatization</subject><subject>Cold Temperature</subject><subject>Gene Expression Regulation, Plant</subject><subject>Oryza - genetics</subject><subject>Oryza - growth & development</subject><subject>Oryza - metabolism</subject><subject>Phosphatidic Acids - metabolism</subject><subject>Phospholipase D - genetics</subject><subject>Phospholipase D - metabolism</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Proteomics - methods</subject><subject>Signal Transduction</subject><subject>Two-Dimensional Difference Gel Electrophoresis - methods</subject><issn>1535-9476</issn><issn>1535-9484</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kcFuEzEURUcIREthzQ69JZtJxxl77NkgVUkoiFZEaVlbjuc5MfKMB3uSaj6Ln2DJN-GQEsGClS2_43uv3s2y16SYkILTy1b3k1tC2KSgNWf1k-ycsJLlNRX06enOq7PsRYxfi2JaEM6eZ2fTilPOqvI8-zHzba-CGuwe4W7YNSN4AwsV3Agz75p8hZudUwM2sAx-QNtFWI9w_-DzuW2xi9Z3ysHcGoMBO41wjQ4WDvUQfL_1AaONsMI9KhdBwSccYeUdgvEBllsfE-NsryLC_Od3AraDW2xsytNtfgeAK62dbdOD7-DObpLbYbRUw_ZBjQd-ZTW-zJ6ZZICvHs-L7Mv7xf3sQ37z-frj7Oom13RK61xUhnGKLG1ClGLdaEaEWLNSrbnhjDZ1TY0udCkqxaYoiGFa1cygEFUjGKPlRfbuqNvv1i02GrshKCf7kBKGUXpl5b-Tzm7lxu8lFVMqqjIJvH0UCP7bDuMgWxs1Oqc69LsoCee8FmVF6oReHlEdfIwBzcmGFPLQvkzty0P78th--vHm73Qn_k_dCaiPAKYd7S0GGbU9tNbYkBqTjbf_Ff8F0ETDnw</recordid><startdate>20160401</startdate><enddate>20160401</enddate><creator>Huo, Chenmin</creator><creator>Zhang, Baowen</creator><creator>Wang, Hui</creator><creator>Wang, Fawei</creator><creator>Liu, Meng</creator><creator>Gao, Yingjie</creator><creator>Zhang, Wenhua</creator><creator>Deng, Zhiping</creator><creator>Sun, Daye</creator><creator>Tang, Wenqiang</creator><general>Elsevier Inc</general><general>The American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20160401</creationdate><title>Comparative Study of Early Cold-Regulated Proteins by Two-Dimensional Difference Gel Electrophoresis Reveals a Key Role for Phospholipase Dα1 in Mediating Cold Acclimation Signaling Pathway in Rice</title><author>Huo, Chenmin ; Zhang, Baowen ; Wang, Hui ; Wang, Fawei ; Liu, Meng ; Gao, Yingjie ; Zhang, Wenhua ; Deng, Zhiping ; Sun, Daye ; Tang, Wenqiang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4249-86f574e5002838bdc5188b53ab7f754d994fc0c386a52e81f5ca95fe886d85543</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Acclimatization</topic><topic>Cold Temperature</topic><topic>Gene Expression Regulation, Plant</topic><topic>Oryza - genetics</topic><topic>Oryza - growth & development</topic><topic>Oryza - metabolism</topic><topic>Phosphatidic Acids - metabolism</topic><topic>Phospholipase D - genetics</topic><topic>Phospholipase D - metabolism</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Proteomics - methods</topic><topic>Signal Transduction</topic><topic>Two-Dimensional Difference Gel Electrophoresis - methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Huo, Chenmin</creatorcontrib><creatorcontrib>Zhang, Baowen</creatorcontrib><creatorcontrib>Wang, Hui</creatorcontrib><creatorcontrib>Wang, Fawei</creatorcontrib><creatorcontrib>Liu, Meng</creatorcontrib><creatorcontrib>Gao, Yingjie</creatorcontrib><creatorcontrib>Zhang, Wenhua</creatorcontrib><creatorcontrib>Deng, Zhiping</creatorcontrib><creatorcontrib>Sun, Daye</creatorcontrib><creatorcontrib>Tang, Wenqiang</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular & cellular proteomics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Huo, Chenmin</au><au>Zhang, Baowen</au><au>Wang, Hui</au><au>Wang, Fawei</au><au>Liu, Meng</au><au>Gao, Yingjie</au><au>Zhang, Wenhua</au><au>Deng, Zhiping</au><au>Sun, Daye</au><au>Tang, Wenqiang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparative Study of Early Cold-Regulated Proteins by Two-Dimensional Difference Gel Electrophoresis Reveals a Key Role for Phospholipase Dα1 in Mediating Cold Acclimation Signaling Pathway in Rice</atitle><jtitle>Molecular & cellular proteomics</jtitle><addtitle>Mol Cell Proteomics</addtitle><date>2016-04-01</date><risdate>2016</risdate><volume>15</volume><issue>4</issue><spage>1397</spage><epage>1411</epage><pages>1397-1411</pages><issn>1535-9476</issn><eissn>1535-9484</eissn><abstract>To understand the early signaling steps that regulate cold responses in rice, two-dimensional difference gel electrophoresis (2-D DIGE)1 was used to study early cold-regulated proteins in rice seedlings. Using mass spectrometry, 32 spots, which represent 26 unique proteins that showed an altered expression level within 5 min of cold treatment were identified. Among these proteins, Western blot analyses confirmed that the cellular phospholipase D α1 (OsPLDα1) protein level was increased as early as 1 min after cold treatment. Genetic studies showed that reducing the expression of OsPLDα1 makes rice plants more sensitive to chilling stress as well as cold acclimation increased freezing tolerance. Correspondingly, cold-regulated proteomic changes and the expression of the cold-responsive C repeat/dehydration-responsive element binding 1 (OsDREB1) family of transcription factors were inhibited in the pldα1 mutant. We also found that the expression of OsPLDα1 is directly regulated by OsDREB1A. This transcriptional regulation of OsPLDα1 could provide positive feedback regulation of the cold signal transduction pathway in rice. OsPLDα1 hydrolyzes phosphatidylcholine to produce the signal molecule phosphatidic acid (PA). By lipid-overlay assay, we demonstrated that the rice cold signaling proteins, MAP kinase 6 (OsMPK6) and OsSIZ1, bind directly to PA. Taken together, our results suggest that OsPLDα1 plays a key role in transducing cold signaling in rice by producing PA and regulating OsDREB1s' expression by OsMPK6, OsSIZ1, and possibly other PA-binding proteins.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>26747563</pmid><doi>10.1074/mcp.M115.049759</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Acclimatization Cold Temperature Gene Expression Regulation, Plant Oryza - genetics Oryza - growth & development Oryza - metabolism Phosphatidic Acids - metabolism Phospholipase D - genetics Phospholipase D - metabolism Plant Proteins - genetics Plant Proteins - metabolism Proteomics - methods Signal Transduction Two-Dimensional Difference Gel Electrophoresis - methods |
title | Comparative Study of Early Cold-Regulated Proteins by Two-Dimensional Difference Gel Electrophoresis Reveals a Key Role for Phospholipase Dα1 in Mediating Cold Acclimation Signaling Pathway in Rice |
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