Influence of ecological and geological features on rangewide patterns of genetic structure in a widespread passerine
Geological and ecological features restrict dispersal and gene flow, leading to isolated populations. Dispersal barriers can be obvious physical structures in the landscape; however microgeographic differences can also lead to genetic isolation. Our study examined dispersal barriers at both macro- a...
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description | Geological and ecological features restrict dispersal and gene flow, leading to isolated populations. Dispersal barriers can be obvious physical structures in the landscape; however microgeographic differences can also lead to genetic isolation. Our study examined dispersal barriers at both macro- and micro-geographical scales in the black-capped chickadee, a resident North American songbird. Although birds have high dispersal potential, evidence suggests dispersal is restricted by barriers. The chickadee's range encompasses a number of physiological features which may impede movement and lead to divergence. Analyses of 913 individuals from 34 sampling sites across the entire range using 11 microsatellite loci revealed as many as 13 genetic clusters. Populations in the east were largely panmictic whereas populations in the western portion of the range showed significant genetic structure, which often coincided with large mountain ranges, such as the Cascade and Rocky Mountains, as well as areas of unsuitable habitat. Unlike populations in the central and southern Rockies, populations on either side of the northern Rockies were not genetically distinct. Furthermore, Northeast Oregon represents a forested island within the Great Basin; genetically isolated from all other populations. Substructuring at the microgeographical scale was also evident within the Fraser Plateau of central British Columbia, and in the southeast Rockies where no obvious physical barriers are present, suggesting additional factors may be impeding dispersal and gene flow. Dispersal barriers are therefore not restricted to large physical structures, although mountain ranges and large water bodies do play a large role in structuring populations in this study. |
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Dispersal barriers can be obvious physical structures in the landscape; however microgeographic differences can also lead to genetic isolation. Our study examined dispersal barriers at both macro- and micro-geographical scales in the black-capped chickadee, a resident North American songbird. Although birds have high dispersal potential, evidence suggests dispersal is restricted by barriers. The chickadee's range encompasses a number of physiological features which may impede movement and lead to divergence. Analyses of 913 individuals from 34 sampling sites across the entire range using 11 microsatellite loci revealed as many as 13 genetic clusters. Populations in the east were largely panmictic whereas populations in the western portion of the range showed significant genetic structure, which often coincided with large mountain ranges, such as the Cascade and Rocky Mountains, as well as areas of unsuitable habitat. Unlike populations in the central and southern Rockies, populations on either side of the northern Rockies were not genetically distinct. Furthermore, Northeast Oregon represents a forested island within the Great Basin; genetically isolated from all other populations. Substructuring at the microgeographical scale was also evident within the Fraser Plateau of central British Columbia, and in the southeast Rockies where no obvious physical barriers are present, suggesting additional factors may be impeding dispersal and gene flow. Dispersal barriers are therefore not restricted to large physical structures, although mountain ranges and large water bodies do play a large role in structuring populations in this study.</description><identifier>ISSN: 0018-067X</identifier><identifier>EISSN: 1365-2540</identifier><identifier>DOI: 10.1038/hdy.2014.64</identifier><identifier>PMID: 25074576</identifier><identifier>CODEN: HDTYAT</identifier><language>eng</language><publisher>England: Springer Nature B.V</publisher><subject>Animal Distribution ; Animals ; Barriers ; Bayes Theorem ; Biogeography ; Birds ; Cluster Analysis ; Dispersal ; Ecology ; Environment ; Evolution, Molecular ; Gene Flow ; Gene loci ; Genetic diversity ; Genetic structure ; Genetic Variation ; Genetics, Population ; Genotype ; Geography ; Landscape ; Microsatellite Repeats ; Models, Genetic ; Mountains ; North America ; Original ; Passeriformes - genetics ; Physiology ; Poecile atricapilla ; Population genetics ; Sequence Analysis, DNA ; Songbirds</subject><ispartof>Heredity, 2015-02, Vol.114 (2), p.143-154</ispartof><rights>Copyright Nature Publishing Group Feb 2015</rights><rights>Copyright © 2015 The Genetics Society 2015 The Genetics Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c475t-1a5e070b0063b5d08b0faedf85c84a9bac69ec77919ee24b257763fad9d5ead33</citedby><cites>FETCH-LOGICAL-c475t-1a5e070b0063b5d08b0faedf85c84a9bac69ec77919ee24b257763fad9d5ead33</cites><orcidid>0000000330156332 ; 0000-0003-3015-6332</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4815624/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4815624/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25074576$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Adams, R V</creatorcontrib><creatorcontrib>Burg, T M</creatorcontrib><title>Influence of ecological and geological features on rangewide patterns of genetic structure in a widespread passerine</title><title>Heredity</title><addtitle>Heredity (Edinb)</addtitle><description>Geological and ecological features restrict dispersal and gene flow, leading to isolated populations. Dispersal barriers can be obvious physical structures in the landscape; however microgeographic differences can also lead to genetic isolation. Our study examined dispersal barriers at both macro- and micro-geographical scales in the black-capped chickadee, a resident North American songbird. Although birds have high dispersal potential, evidence suggests dispersal is restricted by barriers. The chickadee's range encompasses a number of physiological features which may impede movement and lead to divergence. Analyses of 913 individuals from 34 sampling sites across the entire range using 11 microsatellite loci revealed as many as 13 genetic clusters. Populations in the east were largely panmictic whereas populations in the western portion of the range showed significant genetic structure, which often coincided with large mountain ranges, such as the Cascade and Rocky Mountains, as well as areas of unsuitable habitat. Unlike populations in the central and southern Rockies, populations on either side of the northern Rockies were not genetically distinct. Furthermore, Northeast Oregon represents a forested island within the Great Basin; genetically isolated from all other populations. Substructuring at the microgeographical scale was also evident within the Fraser Plateau of central British Columbia, and in the southeast Rockies where no obvious physical barriers are present, suggesting additional factors may be impeding dispersal and gene flow. Dispersal barriers are therefore not restricted to large physical structures, although mountain ranges and large water bodies do play a large role in structuring populations in this study.</description><subject>Animal Distribution</subject><subject>Animals</subject><subject>Barriers</subject><subject>Bayes Theorem</subject><subject>Biogeography</subject><subject>Birds</subject><subject>Cluster Analysis</subject><subject>Dispersal</subject><subject>Ecology</subject><subject>Environment</subject><subject>Evolution, Molecular</subject><subject>Gene Flow</subject><subject>Gene loci</subject><subject>Genetic diversity</subject><subject>Genetic structure</subject><subject>Genetic Variation</subject><subject>Genetics, Population</subject><subject>Genotype</subject><subject>Geography</subject><subject>Landscape</subject><subject>Microsatellite Repeats</subject><subject>Models, Genetic</subject><subject>Mountains</subject><subject>North America</subject><subject>Original</subject><subject>Passeriformes - genetics</subject><subject>Physiology</subject><subject>Poecile atricapilla</subject><subject>Population genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Songbirds</subject><issn>0018-067X</issn><issn>1365-2540</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqNkctr3DAQxkVpaTbbnnovgl4KwdvRW74USugjEMglhd6ELI8dB6-0leyW_Pe1Sbo0OfU0DPObbx4fIW8Y7BgI--GmvdtxYHKn5TOyYUKriisJz8kGgNkKtPlxQk5LuQUAYXj9kpxwBUYqozdkuojdOGMMSFNHMaQx9UPwI_WxpT0e0w79NGcsNEWafezx99AiPfhpwhzL2ttjxGkItEx5DitLh0g9XblyyOjbhS4F8xDxFXnR-bHg64e4Jd-_fL4-_1ZdXn29OP90WQVp1FQxrxAMNABaNKoF20Dnse2sClb6uvFB1xiMqVmNyGXDlTFadL6tW7XME2JLPt7rHuZmj23AOGU_ukMe9j7fueQH97gShxvXp19OWqY0l4vA-weBnH7OWCa3H0rAcfQR01wc01pyqLlg_4EqLqzRC7wl756gt2nOcfnEQkllLedmFTy7p0JOpWTsjnszcKvxbjHercY7vW769t9Tj-xfp8UfOYesGQ</recordid><startdate>20150201</startdate><enddate>20150201</enddate><creator>Adams, R V</creator><creator>Burg, T M</creator><general>Springer Nature B.V</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000000330156332</orcidid><orcidid>https://orcid.org/0000-0003-3015-6332</orcidid></search><sort><creationdate>20150201</creationdate><title>Influence of ecological and geological features on rangewide patterns of genetic structure in a widespread passerine</title><author>Adams, R V ; Burg, T M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c475t-1a5e070b0063b5d08b0faedf85c84a9bac69ec77919ee24b257763fad9d5ead33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Animal Distribution</topic><topic>Animals</topic><topic>Barriers</topic><topic>Bayes Theorem</topic><topic>Biogeography</topic><topic>Birds</topic><topic>Cluster Analysis</topic><topic>Dispersal</topic><topic>Ecology</topic><topic>Environment</topic><topic>Evolution, Molecular</topic><topic>Gene Flow</topic><topic>Gene loci</topic><topic>Genetic diversity</topic><topic>Genetic structure</topic><topic>Genetic Variation</topic><topic>Genetics, Population</topic><topic>Genotype</topic><topic>Geography</topic><topic>Landscape</topic><topic>Microsatellite Repeats</topic><topic>Models, Genetic</topic><topic>Mountains</topic><topic>North America</topic><topic>Original</topic><topic>Passeriformes - genetics</topic><topic>Physiology</topic><topic>Poecile atricapilla</topic><topic>Population genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Songbirds</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Adams, R V</creatorcontrib><creatorcontrib>Burg, T M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Heredity</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Adams, R V</au><au>Burg, T M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Influence of ecological and geological features on rangewide patterns of genetic structure in a widespread passerine</atitle><jtitle>Heredity</jtitle><addtitle>Heredity (Edinb)</addtitle><date>2015-02-01</date><risdate>2015</risdate><volume>114</volume><issue>2</issue><spage>143</spage><epage>154</epage><pages>143-154</pages><issn>0018-067X</issn><eissn>1365-2540</eissn><coden>HDTYAT</coden><abstract>Geological and ecological features restrict dispersal and gene flow, leading to isolated populations. Dispersal barriers can be obvious physical structures in the landscape; however microgeographic differences can also lead to genetic isolation. Our study examined dispersal barriers at both macro- and micro-geographical scales in the black-capped chickadee, a resident North American songbird. Although birds have high dispersal potential, evidence suggests dispersal is restricted by barriers. The chickadee's range encompasses a number of physiological features which may impede movement and lead to divergence. Analyses of 913 individuals from 34 sampling sites across the entire range using 11 microsatellite loci revealed as many as 13 genetic clusters. Populations in the east were largely panmictic whereas populations in the western portion of the range showed significant genetic structure, which often coincided with large mountain ranges, such as the Cascade and Rocky Mountains, as well as areas of unsuitable habitat. Unlike populations in the central and southern Rockies, populations on either side of the northern Rockies were not genetically distinct. Furthermore, Northeast Oregon represents a forested island within the Great Basin; genetically isolated from all other populations. Substructuring at the microgeographical scale was also evident within the Fraser Plateau of central British Columbia, and in the southeast Rockies where no obvious physical barriers are present, suggesting additional factors may be impeding dispersal and gene flow. Dispersal barriers are therefore not restricted to large physical structures, although mountain ranges and large water bodies do play a large role in structuring populations in this study.</abstract><cop>England</cop><pub>Springer Nature B.V</pub><pmid>25074576</pmid><doi>10.1038/hdy.2014.64</doi><tpages>12</tpages><orcidid>https://orcid.org/0000000330156332</orcidid><orcidid>https://orcid.org/0000-0003-3015-6332</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Animal Distribution Animals Barriers Bayes Theorem Biogeography Birds Cluster Analysis Dispersal Ecology Environment Evolution, Molecular Gene Flow Gene loci Genetic diversity Genetic structure Genetic Variation Genetics, Population Genotype Geography Landscape Microsatellite Repeats Models, Genetic Mountains North America Original Passeriformes - genetics Physiology Poecile atricapilla Population genetics Sequence Analysis, DNA Songbirds |
title | Influence of ecological and geological features on rangewide patterns of genetic structure in a widespread passerine |
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