High Genetic Diversity of Newcastle Disease Virus in Wild and Domestic Birds in Northeastern China from 2013 to 2015 Reveals Potential Epidemic Trends
Newcastle disease (ND), caused by the virulent Newcastle disease virus (NDV), is one of the most important viral diseases of birds globally, but little is currently known regarding enzootic trends of NDV in northeastern China, especially for class I viruses. Thus, we performed a surveillance study f...
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| Veröffentlicht in: | Applied and environmental microbiology 2016-03, Vol.82 (5), p.1530-1536 |
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| container_title | Applied and environmental microbiology |
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| creator | Zhang, Pingze Xie, Guangyao Liu, Xinxin Ai, Lili Chen, Yanyu Meng, Xin Bi, Yuhai Chen, Jianjun Sun, Yuzhang Stoeger, Tobias Ding, Zhuang Yin, Renfu |
| description | Newcastle disease (ND), caused by the virulent Newcastle disease virus (NDV), is one of the most important viral diseases of birds globally, but little is currently known regarding enzootic trends of NDV in northeastern China, especially for class I viruses. Thus, we performed a surveillance study for NDV in northeastern China from 2013 to 2015. A total 755 samples from wild and domestic birds in wetlands and live bird markets (LBMs) were collected, and 10 isolates of NDV were identified. Genetic and phylogenetic analyses showed that five isolates from LBMs belong to class I subgenotype 1b, two (one from wild birds and one from LBMs) belong to the vaccine-like class II genotype II, and three (all from wild birds) belong to class II subgenotype Ib. Interestingly, the five class I isolates had epidemiological connections with viruses from southern, eastern, and southeastern China. Our findings, together with recent prevalence trends of class I and virulent class II NDV in China, suggest possible virus transmission between wild and domestic birds and the potential for an NDV epidemic in the future. |
| doi_str_mv | 10.1128/AEM.03402-15 |
| format | Article |
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W.</contributor><creatorcontrib>Zhang, Pingze ; Xie, Guangyao ; Liu, Xinxin ; Ai, Lili ; Chen, Yanyu ; Meng, Xin ; Bi, Yuhai ; Chen, Jianjun ; Sun, Yuzhang ; Stoeger, Tobias ; Ding, Zhuang ; Yin, Renfu ; Schaffner, D. W.</creatorcontrib><description>Newcastle disease (ND), caused by the virulent Newcastle disease virus (NDV), is one of the most important viral diseases of birds globally, but little is currently known regarding enzootic trends of NDV in northeastern China, especially for class I viruses. Thus, we performed a surveillance study for NDV in northeastern China from 2013 to 2015. A total 755 samples from wild and domestic birds in wetlands and live bird markets (LBMs) were collected, and 10 isolates of NDV were identified. Genetic and phylogenetic analyses showed that five isolates from LBMs belong to class I subgenotype 1b, two (one from wild birds and one from LBMs) belong to the vaccine-like class II genotype II, and three (all from wild birds) belong to class II subgenotype Ib. Interestingly, the five class I isolates had epidemiological connections with viruses from southern, eastern, and southeastern China. Our findings, together with recent prevalence trends of class I and virulent class II NDV in China, suggest possible virus transmission between wild and domestic birds and the potential for an NDV epidemic in the future.</description><identifier>ISSN: 0099-2240</identifier><identifier>EISSN: 1098-5336</identifier><identifier>DOI: 10.1128/AEM.03402-15</identifier><identifier>PMID: 26712543</identifier><identifier>CODEN: AEMIDF</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Animals ; Aves ; Birds ; Birds - virology ; China - epidemiology ; Epidemics ; Evolutionary and Genomic Microbiology ; Genetic diversity ; Genetic Variation ; Genotype ; Molecular Epidemiology ; Newcastle Disease - epidemiology ; Newcastle Disease - virology ; Newcastle disease virus ; Newcastle disease virus - classification ; Newcastle disease virus - genetics ; Newcastle disease virus - isolation & purification ; RNA, Viral - genetics ; Viruses ; Zoonoses</subject><ispartof>Applied and environmental microbiology, 2016-03, Vol.82 (5), p.1530-1536</ispartof><rights>Copyright © 2016, American Society for Microbiology. All Rights Reserved.</rights><rights>Copyright American Society for Microbiology Mar 2016</rights><rights>Copyright © 2016, American Society for Microbiology. All Rights Reserved. 2016 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c445t-a631937acdbb625e52b9fe031a1b694b187d51939ba8b589e125e7dc4938d89d3</citedby><cites>FETCH-LOGICAL-c445t-a631937acdbb625e52b9fe031a1b694b187d51939ba8b589e125e7dc4938d89d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4771317/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4771317/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,3187,27923,27924,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26712543$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Schaffner, D. W.</contributor><creatorcontrib>Zhang, Pingze</creatorcontrib><creatorcontrib>Xie, Guangyao</creatorcontrib><creatorcontrib>Liu, Xinxin</creatorcontrib><creatorcontrib>Ai, Lili</creatorcontrib><creatorcontrib>Chen, Yanyu</creatorcontrib><creatorcontrib>Meng, Xin</creatorcontrib><creatorcontrib>Bi, Yuhai</creatorcontrib><creatorcontrib>Chen, Jianjun</creatorcontrib><creatorcontrib>Sun, Yuzhang</creatorcontrib><creatorcontrib>Stoeger, Tobias</creatorcontrib><creatorcontrib>Ding, Zhuang</creatorcontrib><creatorcontrib>Yin, Renfu</creatorcontrib><title>High Genetic Diversity of Newcastle Disease Virus in Wild and Domestic Birds in Northeastern China from 2013 to 2015 Reveals Potential Epidemic Trends</title><title>Applied and environmental microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>Newcastle disease (ND), caused by the virulent Newcastle disease virus (NDV), is one of the most important viral diseases of birds globally, but little is currently known regarding enzootic trends of NDV in northeastern China, especially for class I viruses. Thus, we performed a surveillance study for NDV in northeastern China from 2013 to 2015. A total 755 samples from wild and domestic birds in wetlands and live bird markets (LBMs) were collected, and 10 isolates of NDV were identified. Genetic and phylogenetic analyses showed that five isolates from LBMs belong to class I subgenotype 1b, two (one from wild birds and one from LBMs) belong to the vaccine-like class II genotype II, and three (all from wild birds) belong to class II subgenotype Ib. Interestingly, the five class I isolates had epidemiological connections with viruses from southern, eastern, and southeastern China. Our findings, together with recent prevalence trends of class I and virulent class II NDV in China, suggest possible virus transmission between wild and domestic birds and the potential for an NDV epidemic in the future.</description><subject>Animals</subject><subject>Aves</subject><subject>Birds</subject><subject>Birds - virology</subject><subject>China - epidemiology</subject><subject>Epidemics</subject><subject>Evolutionary and Genomic Microbiology</subject><subject>Genetic diversity</subject><subject>Genetic Variation</subject><subject>Genotype</subject><subject>Molecular Epidemiology</subject><subject>Newcastle Disease - epidemiology</subject><subject>Newcastle Disease - virology</subject><subject>Newcastle disease virus</subject><subject>Newcastle disease virus - classification</subject><subject>Newcastle disease virus - genetics</subject><subject>Newcastle disease virus - isolation & purification</subject><subject>RNA, Viral - genetics</subject><subject>Viruses</subject><subject>Zoonoses</subject><issn>0099-2240</issn><issn>1098-5336</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkk1v1DAQhiMEokvhxhlZ4sKBFH87viCV7dIilYJQgaPlxJOuq8Te2smi_hF-L962VMCJ00iex49mRm9VPSf4gBDavDlcfTzAjGNaE_GgWhCsm1owJh9WC4y1rinleK96kvMlxphj2Tyu9qhUhArOFtXPE3-xRscQYPIdOvJbSNlP1yj26Ax-dDZPA5TnDDYD-ubTnJEP6LsfHLLBoaM4Qt79fOeTu2mdxTStCz1BCmi59sGiPsURUUwYmuKuCvQFtmCHjD7HCcLk7YBWG-9gLKLzBMHlp9WjvgDw7K7uV1_fr86XJ_Xpp-MPy8PTuuNcTLWVjGimbOfaVlIBgra6B8yIJa3UvCWNcqIQurVNKxoNZWtQruOaNa7Rju1Xb2-9m7kdwXVlmmQHs0l-tOnaROvN353g1-Yibg1XijCiiuDVnSDFq7ncwow-dzAMNkCcsyFKSSkV_i-0cFJpRgr68h_0Ms4plEvshJg1jeS0UK9vqS7FnBP093MTbHbZMCUb5iYbhoiCv_hz13v4dxjYL8GNs6Q</recordid><startdate>20160301</startdate><enddate>20160301</enddate><creator>Zhang, Pingze</creator><creator>Xie, Guangyao</creator><creator>Liu, Xinxin</creator><creator>Ai, Lili</creator><creator>Chen, Yanyu</creator><creator>Meng, Xin</creator><creator>Bi, Yuhai</creator><creator>Chen, Jianjun</creator><creator>Sun, Yuzhang</creator><creator>Stoeger, Tobias</creator><creator>Ding, Zhuang</creator><creator>Yin, Renfu</creator><general>American Society for Microbiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20160301</creationdate><title>High Genetic Diversity of Newcastle Disease Virus in Wild and Domestic Birds in Northeastern China from 2013 to 2015 Reveals Potential Epidemic Trends</title><author>Zhang, Pingze ; Xie, Guangyao ; Liu, Xinxin ; Ai, Lili ; Chen, Yanyu ; Meng, Xin ; Bi, Yuhai ; Chen, Jianjun ; Sun, Yuzhang ; Stoeger, Tobias ; Ding, Zhuang ; Yin, Renfu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c445t-a631937acdbb625e52b9fe031a1b694b187d51939ba8b589e125e7dc4938d89d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Animals</topic><topic>Aves</topic><topic>Birds</topic><topic>Birds - virology</topic><topic>China - epidemiology</topic><topic>Epidemics</topic><topic>Evolutionary and Genomic Microbiology</topic><topic>Genetic diversity</topic><topic>Genetic Variation</topic><topic>Genotype</topic><topic>Molecular Epidemiology</topic><topic>Newcastle Disease - epidemiology</topic><topic>Newcastle Disease - virology</topic><topic>Newcastle disease virus</topic><topic>Newcastle disease virus - classification</topic><topic>Newcastle disease virus - genetics</topic><topic>Newcastle disease virus - isolation & purification</topic><topic>RNA, Viral - genetics</topic><topic>Viruses</topic><topic>Zoonoses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhang, Pingze</creatorcontrib><creatorcontrib>Xie, Guangyao</creatorcontrib><creatorcontrib>Liu, Xinxin</creatorcontrib><creatorcontrib>Ai, Lili</creatorcontrib><creatorcontrib>Chen, Yanyu</creatorcontrib><creatorcontrib>Meng, Xin</creatorcontrib><creatorcontrib>Bi, Yuhai</creatorcontrib><creatorcontrib>Chen, Jianjun</creatorcontrib><creatorcontrib>Sun, Yuzhang</creatorcontrib><creatorcontrib>Stoeger, Tobias</creatorcontrib><creatorcontrib>Ding, Zhuang</creatorcontrib><creatorcontrib>Yin, Renfu</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Applied and environmental microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhang, Pingze</au><au>Xie, Guangyao</au><au>Liu, Xinxin</au><au>Ai, Lili</au><au>Chen, Yanyu</au><au>Meng, Xin</au><au>Bi, Yuhai</au><au>Chen, Jianjun</au><au>Sun, Yuzhang</au><au>Stoeger, Tobias</au><au>Ding, Zhuang</au><au>Yin, Renfu</au><au>Schaffner, D. W.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>High Genetic Diversity of Newcastle Disease Virus in Wild and Domestic Birds in Northeastern China from 2013 to 2015 Reveals Potential Epidemic Trends</atitle><jtitle>Applied and environmental microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>2016-03-01</date><risdate>2016</risdate><volume>82</volume><issue>5</issue><spage>1530</spage><epage>1536</epage><pages>1530-1536</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><coden>AEMIDF</coden><abstract>Newcastle disease (ND), caused by the virulent Newcastle disease virus (NDV), is one of the most important viral diseases of birds globally, but little is currently known regarding enzootic trends of NDV in northeastern China, especially for class I viruses. Thus, we performed a surveillance study for NDV in northeastern China from 2013 to 2015. A total 755 samples from wild and domestic birds in wetlands and live bird markets (LBMs) were collected, and 10 isolates of NDV were identified. Genetic and phylogenetic analyses showed that five isolates from LBMs belong to class I subgenotype 1b, two (one from wild birds and one from LBMs) belong to the vaccine-like class II genotype II, and three (all from wild birds) belong to class II subgenotype Ib. Interestingly, the five class I isolates had epidemiological connections with viruses from southern, eastern, and southeastern China. Our findings, together with recent prevalence trends of class I and virulent class II NDV in China, suggest possible virus transmission between wild and domestic birds and the potential for an NDV epidemic in the future.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>26712543</pmid><doi>10.1128/AEM.03402-15</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Animals Aves Birds Birds - virology China - epidemiology Epidemics Evolutionary and Genomic Microbiology Genetic diversity Genetic Variation Genotype Molecular Epidemiology Newcastle Disease - epidemiology Newcastle Disease - virology Newcastle disease virus Newcastle disease virus - classification Newcastle disease virus - genetics Newcastle disease virus - isolation & purification RNA, Viral - genetics Viruses Zoonoses |
| title | High Genetic Diversity of Newcastle Disease Virus in Wild and Domestic Birds in Northeastern China from 2013 to 2015 Reveals Potential Epidemic Trends |
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