Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

Gerton Lunter and colleagues report Platypus software, which combines a haplotype-based multi-sample variant caller with local sequence assembly in a Bayesian statistical framework. They demonstrate applications to exome and whole-genome data sets, to the identification de novo mutations in parent-o...

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Veröffentlicht in:Nature genetics 2014-08, Vol.46 (8), p.912-918
Hauptverfasser: Rimmer, Andy, Phan, Hang, Mathieson, Iain, Iqbal, Zamin, Twigg, Stephen R F, Wilkie, Andrew O M, McVean, Gil, Lunter, Gerton
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Sprache:eng
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