Succination is Increased on Select Proteins in the Brainstem of the NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4) Knockout Mouse, a Model of Leigh Syndrome
Elevated fumarate concentrations as a result of Krebs cycle inhibition lead to increases in protein succination, an irreversible post-translational modification that occurs when fumarate reacts with cysteine residues to generate S-(2-succino)cysteine (2SC). Metabolic events that reduce NADH re-oxida...
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description | Elevated fumarate concentrations as a result of Krebs cycle inhibition lead to increases in protein succination, an irreversible post-translational modification that occurs when fumarate reacts with cysteine residues to generate S-(2-succino)cysteine (2SC). Metabolic events that reduce NADH re-oxidation can block Krebs cycle activity; therefore we hypothesized that oxidative phosphorylation deficiencies, such as those observed in some mitochondrial diseases, would also lead to increased protein succination. Using the Ndufs4 knockout (Ndufs4 KO) mouse, a model of Leigh syndrome, we demonstrate for the first time that protein succination is increased in the brainstem (BS), particularly in the vestibular nucleus. Importantly, the brainstem is the most affected region exhibiting neurodegeneration and astrocyte and microglial proliferation, and these mice typically die of respiratory failure attributed to vestibular nucleus pathology. In contrast, no increases in protein succination were observed in the skeletal muscle, corresponding with the lack of muscle pathology observed in this model. 2D SDS-PAGE followed by immunoblotting for succinated proteins and MS/MS analysis of BS proteins allowed us to identify the voltage-dependent anion channels 1 and 2 as specific targets of succination in the Ndufs4 knockout. Using targeted mass spectrometry, Cys77 and Cys48 were identified as endogenous sites of succination in voltage-dependent anion channels 2. Given the important role of voltage-dependent anion channels isoforms in the exchange of ADP/ATP between the cytosol and the mitochondria, and the already decreased capacity for ATP synthesis in the Ndufs4 KO mice, we propose that the increased protein succination observed in the BS of these animals would further decrease the already compromised mitochondrial function. These data suggest that fumarate is a novel biochemical link that may contribute to the progression of the neuropathology in this mitochondrial disease model. |
doi_str_mv | 10.1074/mcp.M115.051516 |
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Metabolic events that reduce NADH re-oxidation can block Krebs cycle activity; therefore we hypothesized that oxidative phosphorylation deficiencies, such as those observed in some mitochondrial diseases, would also lead to increased protein succination. Using the Ndufs4 knockout (Ndufs4 KO) mouse, a model of Leigh syndrome, we demonstrate for the first time that protein succination is increased in the brainstem (BS), particularly in the vestibular nucleus. Importantly, the brainstem is the most affected region exhibiting neurodegeneration and astrocyte and microglial proliferation, and these mice typically die of respiratory failure attributed to vestibular nucleus pathology. In contrast, no increases in protein succination were observed in the skeletal muscle, corresponding with the lack of muscle pathology observed in this model. 2D SDS-PAGE followed by immunoblotting for succinated proteins and MS/MS analysis of BS proteins allowed us to identify the voltage-dependent anion channels 1 and 2 as specific targets of succination in the Ndufs4 knockout. Using targeted mass spectrometry, Cys77 and Cys48 were identified as endogenous sites of succination in voltage-dependent anion channels 2. Given the important role of voltage-dependent anion channels isoforms in the exchange of ADP/ATP between the cytosol and the mitochondria, and the already decreased capacity for ATP synthesis in the Ndufs4 KO mice, we propose that the increased protein succination observed in the BS of these animals would further decrease the already compromised mitochondrial function. These data suggest that fumarate is a novel biochemical link that may contribute to the progression of the neuropathology in this mitochondrial disease model.</description><identifier>ISSN: 1535-9476</identifier><identifier>EISSN: 1535-9484</identifier><identifier>DOI: 10.1074/mcp.M115.051516</identifier><identifier>PMID: 26450614</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Animals ; Brain Stem - metabolism ; Brain Stem - pathology ; Citric Acid Cycle ; Cysteine - metabolism ; Disease Models, Animal ; Electron Transport Complex I - genetics ; Electron Transport Complex I - metabolism ; Fumarates - metabolism ; Humans ; Leigh Disease - genetics ; Leigh Disease - metabolism ; Leigh Disease - pathology ; Mice ; Mice, Knockout ; Mitochondria - metabolism ; Mitochondria - pathology ; Protein Processing, Post-Translational - genetics ; Proteomics ; Special Issue ; Succinates - metabolism ; Tandem Mass Spectrometry</subject><ispartof>Molecular & cellular proteomics, 2016-02, Vol.15 (2), p.445-461</ispartof><rights>2016 © 2016 ASBMB. Currently published by Elsevier Inc; originally published by American Society for Biochemistry and Molecular Biology.</rights><rights>2016 by The American Society for Biochemistry and Molecular Biology, Inc.</rights><rights>2016 by The American Society for Biochemistry and Molecular Biology, Inc. 2016 The American Society for Biochemistry and Molecular Biology, Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c489t-7b10cd12d8fd4a9d494e81f626ab794beaad2d88bb83b858cdbf15ed9d71aacd3</citedby><cites>FETCH-LOGICAL-c489t-7b10cd12d8fd4a9d494e81f626ab794beaad2d88bb83b858cdbf15ed9d71aacd3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4739666/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4739666/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26450614$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Piroli, Gerardo G.</creatorcontrib><creatorcontrib>Manuel, Allison M.</creatorcontrib><creatorcontrib>Clapper, Anna C.</creatorcontrib><creatorcontrib>Walla, Michael D.</creatorcontrib><creatorcontrib>Baatz, John E.</creatorcontrib><creatorcontrib>Palmiter, Richard D.</creatorcontrib><creatorcontrib>Quintana, Albert</creatorcontrib><creatorcontrib>Frizzell, Norma</creatorcontrib><title>Succination is Increased on Select Proteins in the Brainstem of the NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4) Knockout Mouse, a Model of Leigh Syndrome</title><title>Molecular & cellular proteomics</title><addtitle>Mol Cell Proteomics</addtitle><description>Elevated fumarate concentrations as a result of Krebs cycle inhibition lead to increases in protein succination, an irreversible post-translational modification that occurs when fumarate reacts with cysteine residues to generate S-(2-succino)cysteine (2SC). Metabolic events that reduce NADH re-oxidation can block Krebs cycle activity; therefore we hypothesized that oxidative phosphorylation deficiencies, such as those observed in some mitochondrial diseases, would also lead to increased protein succination. Using the Ndufs4 knockout (Ndufs4 KO) mouse, a model of Leigh syndrome, we demonstrate for the first time that protein succination is increased in the brainstem (BS), particularly in the vestibular nucleus. Importantly, the brainstem is the most affected region exhibiting neurodegeneration and astrocyte and microglial proliferation, and these mice typically die of respiratory failure attributed to vestibular nucleus pathology. In contrast, no increases in protein succination were observed in the skeletal muscle, corresponding with the lack of muscle pathology observed in this model. 2D SDS-PAGE followed by immunoblotting for succinated proteins and MS/MS analysis of BS proteins allowed us to identify the voltage-dependent anion channels 1 and 2 as specific targets of succination in the Ndufs4 knockout. Using targeted mass spectrometry, Cys77 and Cys48 were identified as endogenous sites of succination in voltage-dependent anion channels 2. Given the important role of voltage-dependent anion channels isoforms in the exchange of ADP/ATP between the cytosol and the mitochondria, and the already decreased capacity for ATP synthesis in the Ndufs4 KO mice, we propose that the increased protein succination observed in the BS of these animals would further decrease the already compromised mitochondrial function. These data suggest that fumarate is a novel biochemical link that may contribute to the progression of the neuropathology in this mitochondrial disease model.</description><subject>Animals</subject><subject>Brain Stem - metabolism</subject><subject>Brain Stem - pathology</subject><subject>Citric Acid Cycle</subject><subject>Cysteine - metabolism</subject><subject>Disease Models, Animal</subject><subject>Electron Transport Complex I - genetics</subject><subject>Electron Transport Complex I - metabolism</subject><subject>Fumarates - metabolism</subject><subject>Humans</subject><subject>Leigh Disease - genetics</subject><subject>Leigh Disease - metabolism</subject><subject>Leigh Disease - pathology</subject><subject>Mice</subject><subject>Mice, Knockout</subject><subject>Mitochondria - metabolism</subject><subject>Mitochondria - pathology</subject><subject>Protein Processing, Post-Translational - genetics</subject><subject>Proteomics</subject><subject>Special Issue</subject><subject>Succinates - metabolism</subject><subject>Tandem Mass Spectrometry</subject><issn>1535-9476</issn><issn>1535-9484</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kU1v1DAQhiNERUvLmRvycSuRbZw4dnxBagulFdsWaeFs-WOya0jsrZ1U2h_E_8RL2hUcOHnG887jGb9Z9hYXc1wwctbrzfwW43pe1LjG9EV2hOuqzjlpyMt9zOhh9jrGH0VRFpjVr7LDkpK6oJgcZb-Wo9bWycF6h2xEN04HkBEMSvkSOtAD-hr8ANZFZB0a1oAugkzZAD3y7Z-Lu_OP18jAemuCX4FL7Wg2KvswWucdnKIryJdoM1EQQbM7M7aRnKIvzuuffhzQrR8jvEcyBQa6HXYBdrVGy61LyB5OsoNWdhHePJ3H2ferT98ur_PF_eeby_NFrknDh5wpXGiDS9O0hkhuCCfQ4JaWVCrGiQIpTSo2SjWVaupGG9XiGgw3DEupTXWcfZi4m1H1YDS4IchObILtZdgKL634t-LsWqz8oyCs4pTSBJg9AYJ_GCEOordRQ9dJB2lHgRktK0IIZ0l6Nkl18DEGaPfP4ELszBXJXLEzV0zmpo53f0-31z-7mQR8EkD6o0cLQURtwWkwNiQjhfH2v_DfWkO2wQ</recordid><startdate>20160201</startdate><enddate>20160201</enddate><creator>Piroli, Gerardo G.</creator><creator>Manuel, Allison M.</creator><creator>Clapper, Anna C.</creator><creator>Walla, Michael D.</creator><creator>Baatz, John E.</creator><creator>Palmiter, Richard D.</creator><creator>Quintana, Albert</creator><creator>Frizzell, Norma</creator><general>Elsevier Inc</general><general>The American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20160201</creationdate><title>Succination is Increased on Select Proteins in the Brainstem of the NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4) Knockout Mouse, a Model of Leigh Syndrome</title><author>Piroli, Gerardo G. ; Manuel, Allison M. ; Clapper, Anna C. ; Walla, Michael D. ; Baatz, John E. ; Palmiter, Richard D. ; Quintana, Albert ; Frizzell, Norma</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c489t-7b10cd12d8fd4a9d494e81f626ab794beaad2d88bb83b858cdbf15ed9d71aacd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Animals</topic><topic>Brain Stem - metabolism</topic><topic>Brain Stem - pathology</topic><topic>Citric Acid Cycle</topic><topic>Cysteine - metabolism</topic><topic>Disease Models, Animal</topic><topic>Electron Transport Complex I - genetics</topic><topic>Electron Transport Complex I - metabolism</topic><topic>Fumarates - metabolism</topic><topic>Humans</topic><topic>Leigh Disease - genetics</topic><topic>Leigh Disease - metabolism</topic><topic>Leigh Disease - pathology</topic><topic>Mice</topic><topic>Mice, Knockout</topic><topic>Mitochondria - metabolism</topic><topic>Mitochondria - pathology</topic><topic>Protein Processing, Post-Translational - genetics</topic><topic>Proteomics</topic><topic>Special Issue</topic><topic>Succinates - metabolism</topic><topic>Tandem Mass Spectrometry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Piroli, Gerardo G.</creatorcontrib><creatorcontrib>Manuel, Allison M.</creatorcontrib><creatorcontrib>Clapper, Anna C.</creatorcontrib><creatorcontrib>Walla, Michael D.</creatorcontrib><creatorcontrib>Baatz, John E.</creatorcontrib><creatorcontrib>Palmiter, Richard D.</creatorcontrib><creatorcontrib>Quintana, Albert</creatorcontrib><creatorcontrib>Frizzell, Norma</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular & cellular proteomics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Piroli, Gerardo G.</au><au>Manuel, Allison M.</au><au>Clapper, Anna C.</au><au>Walla, Michael D.</au><au>Baatz, John E.</au><au>Palmiter, Richard D.</au><au>Quintana, Albert</au><au>Frizzell, Norma</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Succination is Increased on Select Proteins in the Brainstem of the NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4) Knockout Mouse, a Model of Leigh Syndrome</atitle><jtitle>Molecular & cellular proteomics</jtitle><addtitle>Mol Cell Proteomics</addtitle><date>2016-02-01</date><risdate>2016</risdate><volume>15</volume><issue>2</issue><spage>445</spage><epage>461</epage><pages>445-461</pages><issn>1535-9476</issn><eissn>1535-9484</eissn><abstract>Elevated fumarate concentrations as a result of Krebs cycle inhibition lead to increases in protein succination, an irreversible post-translational modification that occurs when fumarate reacts with cysteine residues to generate S-(2-succino)cysteine (2SC). Metabolic events that reduce NADH re-oxidation can block Krebs cycle activity; therefore we hypothesized that oxidative phosphorylation deficiencies, such as those observed in some mitochondrial diseases, would also lead to increased protein succination. Using the Ndufs4 knockout (Ndufs4 KO) mouse, a model of Leigh syndrome, we demonstrate for the first time that protein succination is increased in the brainstem (BS), particularly in the vestibular nucleus. Importantly, the brainstem is the most affected region exhibiting neurodegeneration and astrocyte and microglial proliferation, and these mice typically die of respiratory failure attributed to vestibular nucleus pathology. In contrast, no increases in protein succination were observed in the skeletal muscle, corresponding with the lack of muscle pathology observed in this model. 2D SDS-PAGE followed by immunoblotting for succinated proteins and MS/MS analysis of BS proteins allowed us to identify the voltage-dependent anion channels 1 and 2 as specific targets of succination in the Ndufs4 knockout. Using targeted mass spectrometry, Cys77 and Cys48 were identified as endogenous sites of succination in voltage-dependent anion channels 2. Given the important role of voltage-dependent anion channels isoforms in the exchange of ADP/ATP between the cytosol and the mitochondria, and the already decreased capacity for ATP synthesis in the Ndufs4 KO mice, we propose that the increased protein succination observed in the BS of these animals would further decrease the already compromised mitochondrial function. These data suggest that fumarate is a novel biochemical link that may contribute to the progression of the neuropathology in this mitochondrial disease model.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>26450614</pmid><doi>10.1074/mcp.M115.051516</doi><tpages>17</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Brain Stem - metabolism Brain Stem - pathology Citric Acid Cycle Cysteine - metabolism Disease Models, Animal Electron Transport Complex I - genetics Electron Transport Complex I - metabolism Fumarates - metabolism Humans Leigh Disease - genetics Leigh Disease - metabolism Leigh Disease - pathology Mice Mice, Knockout Mitochondria - metabolism Mitochondria - pathology Protein Processing, Post-Translational - genetics Proteomics Special Issue Succinates - metabolism Tandem Mass Spectrometry |
title | Succination is Increased on Select Proteins in the Brainstem of the NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4) Knockout Mouse, a Model of Leigh Syndrome |
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