Molecular spectrum of BRAF, NRAS and KRAS gene mutations in plasma cell dyscrasias: implication for MEK-ERK pathway activation
Multiple myeloma (MM) is a clinically and genetically heterogeneous plasma cell (PC) malignancy. Whole-exome sequencing has identified therapeutically targetable mutations such as those in the mitogen-activated protein kinase (MAPK) pathway, which are the most prevalent MM mutations. We used deep se...
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creator | Lionetti, Marta Barbieri, Marzia Todoerti, Katia Agnelli, Luca Marzorati, Simona Fabris, Sonia Ciceri, Gabriella Galletti, Serena Milesi, Giulia Manzoni, Martina Mazzoni, Mara Greco, Angela Tonon, Giovanni Musto, Pellegrino Baldini, Luca Neri, Antonino |
description | Multiple myeloma (MM) is a clinically and genetically heterogeneous plasma cell (PC) malignancy. Whole-exome sequencing has identified therapeutically targetable mutations such as those in the mitogen-activated protein kinase (MAPK) pathway, which are the most prevalent MM mutations. We used deep sequencing to screen 167 representative patients with PC dyscrasias [132 with MM, 24 with primary PC leukemia (pPCL) and 11 with secondary PC leukemia (sPCL)] for mutations in BRAF, NRAS and KRAS, which were respectively found in 12%, 23.9% and 29.3% of cases. Overall, the MAPK pathway was affected in 57.5% of the patients (63.6% of those with sPCL, 59.8% of those with MM, and 41.7% of those with pPCL). The majority of BRAF variants were comparably expressed at transcript level. Additionally, gene expression profiling indicated the MAPK pathway is activated in mutated patients. Finally, we found that vemurafenib inhibition of BRAF activation in mutated U266 cells affected the expression of genes known to be associated with MM. Our data confirm and extend previous published evidence that MAPK pathway activation is recurrent in myeloma; the finding that it is mediated by BRAF mutations in a significant fraction of patients has potentially immediate clinical implications. |
doi_str_mv | 10.18632/oncotarget.4434 |
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Whole-exome sequencing has identified therapeutically targetable mutations such as those in the mitogen-activated protein kinase (MAPK) pathway, which are the most prevalent MM mutations. We used deep sequencing to screen 167 representative patients with PC dyscrasias [132 with MM, 24 with primary PC leukemia (pPCL) and 11 with secondary PC leukemia (sPCL)] for mutations in BRAF, NRAS and KRAS, which were respectively found in 12%, 23.9% and 29.3% of cases. Overall, the MAPK pathway was affected in 57.5% of the patients (63.6% of those with sPCL, 59.8% of those with MM, and 41.7% of those with pPCL). The majority of BRAF variants were comparably expressed at transcript level. Additionally, gene expression profiling indicated the MAPK pathway is activated in mutated patients. Finally, we found that vemurafenib inhibition of BRAF activation in mutated U266 cells affected the expression of genes known to be associated with MM. Our data confirm and extend previous published evidence that MAPK pathway activation is recurrent in myeloma; the finding that it is mediated by BRAF mutations in a significant fraction of patients has potentially immediate clinical implications.</description><identifier>ISSN: 1949-2553</identifier><identifier>EISSN: 1949-2553</identifier><identifier>DOI: 10.18632/oncotarget.4434</identifier><identifier>PMID: 26090869</identifier><language>eng</language><publisher>United States: Impact Journals LLC</publisher><subject>Adult ; Aged ; Aged, 80 and over ; Apoptosis ; Cell Line, Tumor ; Exome ; Extracellular Signal-Regulated MAP Kinases - metabolism ; Female ; Gene Expression Profiling ; Gene Expression Regulation, Leukemic ; Gene Expression Regulation, Neoplastic ; GTP Phosphohydrolases - genetics ; Humans ; Indoles - therapeutic use ; Leukemia - genetics ; Leukemia - metabolism ; Male ; MAP Kinase Kinase 1 - metabolism ; MAP Kinase Signaling System ; Membrane Proteins - genetics ; Middle Aged ; Multiple Myeloma - genetics ; Multiple Myeloma - metabolism ; Mutation ; Paraproteinemias - genetics ; Paraproteinemias - metabolism ; Principal Component Analysis ; Proto-Oncogene Proteins B-raf - genetics ; Proto-Oncogene Proteins p21(ras) - genetics ; Research Paper ; Sulfonamides - therapeutic use</subject><ispartof>Oncotarget, 2015-09, Vol.6 (27), p.24205-24217</ispartof><rights>Copyright: © 2015 Lionetti et al. 2015</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c396t-4d09a1822158d386e1d5dcc1c2a072528ad9ddff9dd1588fe64d5da0bd79cd623</citedby><cites>FETCH-LOGICAL-c396t-4d09a1822158d386e1d5dcc1c2a072528ad9ddff9dd1588fe64d5da0bd79cd623</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4695180/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4695180/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,315,729,782,786,887,27931,27932,53798,53800</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26090869$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lionetti, Marta</creatorcontrib><creatorcontrib>Barbieri, Marzia</creatorcontrib><creatorcontrib>Todoerti, Katia</creatorcontrib><creatorcontrib>Agnelli, Luca</creatorcontrib><creatorcontrib>Marzorati, Simona</creatorcontrib><creatorcontrib>Fabris, Sonia</creatorcontrib><creatorcontrib>Ciceri, Gabriella</creatorcontrib><creatorcontrib>Galletti, Serena</creatorcontrib><creatorcontrib>Milesi, Giulia</creatorcontrib><creatorcontrib>Manzoni, Martina</creatorcontrib><creatorcontrib>Mazzoni, Mara</creatorcontrib><creatorcontrib>Greco, Angela</creatorcontrib><creatorcontrib>Tonon, Giovanni</creatorcontrib><creatorcontrib>Musto, Pellegrino</creatorcontrib><creatorcontrib>Baldini, Luca</creatorcontrib><creatorcontrib>Neri, Antonino</creatorcontrib><title>Molecular spectrum of BRAF, NRAS and KRAS gene mutations in plasma cell dyscrasias: implication for MEK-ERK pathway activation</title><title>Oncotarget</title><addtitle>Oncotarget</addtitle><description>Multiple myeloma (MM) is a clinically and genetically heterogeneous plasma cell (PC) malignancy. Whole-exome sequencing has identified therapeutically targetable mutations such as those in the mitogen-activated protein kinase (MAPK) pathway, which are the most prevalent MM mutations. We used deep sequencing to screen 167 representative patients with PC dyscrasias [132 with MM, 24 with primary PC leukemia (pPCL) and 11 with secondary PC leukemia (sPCL)] for mutations in BRAF, NRAS and KRAS, which were respectively found in 12%, 23.9% and 29.3% of cases. Overall, the MAPK pathway was affected in 57.5% of the patients (63.6% of those with sPCL, 59.8% of those with MM, and 41.7% of those with pPCL). The majority of BRAF variants were comparably expressed at transcript level. Additionally, gene expression profiling indicated the MAPK pathway is activated in mutated patients. Finally, we found that vemurafenib inhibition of BRAF activation in mutated U266 cells affected the expression of genes known to be associated with MM. Our data confirm and extend previous published evidence that MAPK pathway activation is recurrent in myeloma; the finding that it is mediated by BRAF mutations in a significant fraction of patients has potentially immediate clinical implications.</description><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Apoptosis</subject><subject>Cell Line, Tumor</subject><subject>Exome</subject><subject>Extracellular Signal-Regulated MAP Kinases - metabolism</subject><subject>Female</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation, Leukemic</subject><subject>Gene Expression Regulation, Neoplastic</subject><subject>GTP Phosphohydrolases - genetics</subject><subject>Humans</subject><subject>Indoles - therapeutic use</subject><subject>Leukemia - genetics</subject><subject>Leukemia - metabolism</subject><subject>Male</subject><subject>MAP Kinase Kinase 1 - metabolism</subject><subject>MAP Kinase Signaling System</subject><subject>Membrane Proteins - genetics</subject><subject>Middle Aged</subject><subject>Multiple Myeloma - genetics</subject><subject>Multiple Myeloma - metabolism</subject><subject>Mutation</subject><subject>Paraproteinemias - genetics</subject><subject>Paraproteinemias - metabolism</subject><subject>Principal Component Analysis</subject><subject>Proto-Oncogene Proteins B-raf - genetics</subject><subject>Proto-Oncogene Proteins p21(ras) - genetics</subject><subject>Research Paper</subject><subject>Sulfonamides - therapeutic use</subject><issn>1949-2553</issn><issn>1949-2553</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkc1P3DAQxa2qVUGUe0-Vjz00YDuO1-6h0oKWDy0f0gJna7CdxVUSB9sB7YW_nexCKfhgP2l-82ash9B3SvaoFCXbD50JGeLS5T3OS_4JbVPFVcGqqvz8Tm-h3ZT-kvFUfCKZ-oq2mCCKSKG20dN5aJwZGog49c7kOLQ41PhgMT36hS8W0ysMncXztVi6zuF2yJB96BL2He4bSC1g45oG21UyEZKH9Bv7tm-82XC4DhGfz-bFbDHHPeS7R1hhMNk_bMrf0JcamuR2X98ddHM0uz48Kc4uj08Pp2eFKZXIBbdEAZWM0UraUgpHbWWNoYYBmbCKSbDK2roer5GQtRN8BIDc2okyVrByB_158e2H29ZZ47ocodF99C3ElQ7g9cdK5-_0MjxoLlRFJRkNfr4axHA_uJR169P649C5MCRNJ1QoTmhVjih5QU0MKUVXv42hRG-S0_-T0-vkxpYf79d7a_iXU_kMKzOZJQ</recordid><startdate>20150915</startdate><enddate>20150915</enddate><creator>Lionetti, Marta</creator><creator>Barbieri, Marzia</creator><creator>Todoerti, Katia</creator><creator>Agnelli, Luca</creator><creator>Marzorati, Simona</creator><creator>Fabris, Sonia</creator><creator>Ciceri, Gabriella</creator><creator>Galletti, Serena</creator><creator>Milesi, Giulia</creator><creator>Manzoni, Martina</creator><creator>Mazzoni, Mara</creator><creator>Greco, Angela</creator><creator>Tonon, Giovanni</creator><creator>Musto, Pellegrino</creator><creator>Baldini, Luca</creator><creator>Neri, Antonino</creator><general>Impact Journals LLC</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20150915</creationdate><title>Molecular spectrum of BRAF, NRAS and KRAS gene mutations in plasma cell dyscrasias: implication for MEK-ERK pathway activation</title><author>Lionetti, Marta ; Barbieri, Marzia ; Todoerti, Katia ; Agnelli, Luca ; Marzorati, Simona ; Fabris, Sonia ; Ciceri, Gabriella ; Galletti, Serena ; Milesi, Giulia ; Manzoni, Martina ; Mazzoni, Mara ; Greco, Angela ; Tonon, Giovanni ; Musto, Pellegrino ; Baldini, Luca ; Neri, Antonino</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c396t-4d09a1822158d386e1d5dcc1c2a072528ad9ddff9dd1588fe64d5da0bd79cd623</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Adult</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Apoptosis</topic><topic>Cell Line, Tumor</topic><topic>Exome</topic><topic>Extracellular Signal-Regulated MAP Kinases - metabolism</topic><topic>Female</topic><topic>Gene Expression Profiling</topic><topic>Gene Expression Regulation, Leukemic</topic><topic>Gene Expression Regulation, Neoplastic</topic><topic>GTP Phosphohydrolases - genetics</topic><topic>Humans</topic><topic>Indoles - therapeutic use</topic><topic>Leukemia - genetics</topic><topic>Leukemia - metabolism</topic><topic>Male</topic><topic>MAP Kinase Kinase 1 - metabolism</topic><topic>MAP Kinase Signaling System</topic><topic>Membrane Proteins - genetics</topic><topic>Middle Aged</topic><topic>Multiple Myeloma - genetics</topic><topic>Multiple Myeloma - metabolism</topic><topic>Mutation</topic><topic>Paraproteinemias - genetics</topic><topic>Paraproteinemias - metabolism</topic><topic>Principal Component Analysis</topic><topic>Proto-Oncogene Proteins B-raf - genetics</topic><topic>Proto-Oncogene Proteins p21(ras) - genetics</topic><topic>Research Paper</topic><topic>Sulfonamides - therapeutic use</topic><toplevel>online_resources</toplevel><creatorcontrib>Lionetti, Marta</creatorcontrib><creatorcontrib>Barbieri, Marzia</creatorcontrib><creatorcontrib>Todoerti, Katia</creatorcontrib><creatorcontrib>Agnelli, Luca</creatorcontrib><creatorcontrib>Marzorati, Simona</creatorcontrib><creatorcontrib>Fabris, Sonia</creatorcontrib><creatorcontrib>Ciceri, Gabriella</creatorcontrib><creatorcontrib>Galletti, Serena</creatorcontrib><creatorcontrib>Milesi, Giulia</creatorcontrib><creatorcontrib>Manzoni, Martina</creatorcontrib><creatorcontrib>Mazzoni, Mara</creatorcontrib><creatorcontrib>Greco, Angela</creatorcontrib><creatorcontrib>Tonon, Giovanni</creatorcontrib><creatorcontrib>Musto, Pellegrino</creatorcontrib><creatorcontrib>Baldini, Luca</creatorcontrib><creatorcontrib>Neri, Antonino</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Oncotarget</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lionetti, Marta</au><au>Barbieri, Marzia</au><au>Todoerti, Katia</au><au>Agnelli, Luca</au><au>Marzorati, Simona</au><au>Fabris, Sonia</au><au>Ciceri, Gabriella</au><au>Galletti, Serena</au><au>Milesi, Giulia</au><au>Manzoni, Martina</au><au>Mazzoni, Mara</au><au>Greco, Angela</au><au>Tonon, Giovanni</au><au>Musto, Pellegrino</au><au>Baldini, Luca</au><au>Neri, Antonino</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular spectrum of BRAF, NRAS and KRAS gene mutations in plasma cell dyscrasias: implication for MEK-ERK pathway activation</atitle><jtitle>Oncotarget</jtitle><addtitle>Oncotarget</addtitle><date>2015-09-15</date><risdate>2015</risdate><volume>6</volume><issue>27</issue><spage>24205</spage><epage>24217</epage><pages>24205-24217</pages><issn>1949-2553</issn><eissn>1949-2553</eissn><abstract>Multiple myeloma (MM) is a clinically and genetically heterogeneous plasma cell (PC) malignancy. Whole-exome sequencing has identified therapeutically targetable mutations such as those in the mitogen-activated protein kinase (MAPK) pathway, which are the most prevalent MM mutations. We used deep sequencing to screen 167 representative patients with PC dyscrasias [132 with MM, 24 with primary PC leukemia (pPCL) and 11 with secondary PC leukemia (sPCL)] for mutations in BRAF, NRAS and KRAS, which were respectively found in 12%, 23.9% and 29.3% of cases. Overall, the MAPK pathway was affected in 57.5% of the patients (63.6% of those with sPCL, 59.8% of those with MM, and 41.7% of those with pPCL). The majority of BRAF variants were comparably expressed at transcript level. Additionally, gene expression profiling indicated the MAPK pathway is activated in mutated patients. Finally, we found that vemurafenib inhibition of BRAF activation in mutated U266 cells affected the expression of genes known to be associated with MM. Our data confirm and extend previous published evidence that MAPK pathway activation is recurrent in myeloma; the finding that it is mediated by BRAF mutations in a significant fraction of patients has potentially immediate clinical implications.</abstract><cop>United States</cop><pub>Impact Journals LLC</pub><pmid>26090869</pmid><doi>10.18632/oncotarget.4434</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult Aged Aged, 80 and over Apoptosis Cell Line, Tumor Exome Extracellular Signal-Regulated MAP Kinases - metabolism Female Gene Expression Profiling Gene Expression Regulation, Leukemic Gene Expression Regulation, Neoplastic GTP Phosphohydrolases - genetics Humans Indoles - therapeutic use Leukemia - genetics Leukemia - metabolism Male MAP Kinase Kinase 1 - metabolism MAP Kinase Signaling System Membrane Proteins - genetics Middle Aged Multiple Myeloma - genetics Multiple Myeloma - metabolism Mutation Paraproteinemias - genetics Paraproteinemias - metabolism Principal Component Analysis Proto-Oncogene Proteins B-raf - genetics Proto-Oncogene Proteins p21(ras) - genetics Research Paper Sulfonamides - therapeutic use |
title | Molecular spectrum of BRAF, NRAS and KRAS gene mutations in plasma cell dyscrasias: implication for MEK-ERK pathway activation |
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