Innovating to enhance clinical data management using non-commercial and open source solutions across a multi-center network supporting inpatient pediatric care and research in Kenya

Objective To share approaches and innovations adopted to deliver a relatively inexpensive clinical data management (CDM) framework within a low-income setting that aims to deliver quality pediatric data useful for supporting research, strengthening the information culture and informing improvement e...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of the American Medical Informatics Association : JAMIA 2016-01, Vol.23 (1), p.184-192
Hauptverfasser: Tuti, Timothy, Bitok, Michael, Paton, Chris, Makone, Boniface, Malla, Lucas, Muinga, Naomi, Gathara, David, English, Mike
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 192
container_issue 1
container_start_page 184
container_title Journal of the American Medical Informatics Association : JAMIA
container_volume 23
creator Tuti, Timothy
Bitok, Michael
Paton, Chris
Makone, Boniface
Malla, Lucas
Muinga, Naomi
Gathara, David
English, Mike
description Objective To share approaches and innovations adopted to deliver a relatively inexpensive clinical data management (CDM) framework within a low-income setting that aims to deliver quality pediatric data useful for supporting research, strengthening the information culture and informing improvement efforts in local clinical practice. Materials and methods The authors implemented a CDM framework to support a Clinical Information Network (CIN) using Research Electronic Data Capture (REDCap), a noncommercial software solution designed for rapid development and deployment of electronic data capture tools. It was used for collection of standardized data from case records of multiple hospitals’ pediatric wards. R, an open-source statistical language, was used for data quality enhancement, analysis, and report generation for the hospitals. Results In the first year of CIN, the authors have developed innovative solutions to support the implementation of a secure, rapid pediatric data collection system spanning 14 hospital sites with stringent data quality checks. Data have been collated on over 37 000 admission episodes, with considerable improvement in clinical documentation of admissions observed. Using meta-programming techniques in R, coupled with branching logic, randomization, data lookup, and Application Programming Interface (API) features offered by REDCap, CDM tasks were configured and automated to ensure quality data was delivered for clinical improvement and research use. Conclusion A low-cost clinically focused but geographically dispersed quality CDM (Clinical Data Management) in a long-term, multi-site, and real world context can be achieved and sustained and challenges can be overcome through thoughtful design and implementation of open-source tools for handling data and supporting research.
doi_str_mv 10.1093/jamia/ocv028
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4681113</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><oup_id>10.1093/jamia/ocv028</oup_id><sourcerecordid>1768559839</sourcerecordid><originalsourceid>FETCH-LOGICAL-c416t-994a991c7217db875140c68437a1e02bce12800325ed465239d741e3d192aadb3</originalsourceid><addsrcrecordid>eNp9kTtvFDEURkcIRB7QUSN3UGSIHzP2uEGKIh4RkWhAorPuem52HWbswY9F-WH8P7y7IYKG6lry8bmf_DXNC0bfMKrF-S3MDs6D3VI-PGqOWc9Vq1X37XE9U6nannJ11JykdEspk1z0T5sjLqkUqpPHza8r78MWsvNrkgNBvwFvkdjJeWdhIiNkIDN4WOOMPpOSdqQPvrVhnjFaVyHwIwkLepJCifV1ClPJLvhEwMaQ6iBzmbJrbVVgJB7zzxC_k1SWJcT9bueXGmK3YcHRQY7OEgsR9-6ICSHaTaXIJ_R38Kx5cgNTwuf387T5-v7dl8uP7fXnD1eXF9et7ZjMrdYdaM2s4kyNq0H1rKNWDp1QwJDylUXGB0oF73HsZM-FHlXHUIxMc4BxJU6btwfvUlYzjrv4ESazRDdDvDMBnPn3xruNWYet6eTAGBNV8PpeEMOPgimb2SWL0wQeQ0mGKTn0vR6ErujZAd1_WcSbhzWMml3TZt-0OTRd8Zd_R3uA_1RbgVcHIJTl_6rfzn-5VQ</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1768559839</pqid></control><display><type>article</type><title>Innovating to enhance clinical data management using non-commercial and open source solutions across a multi-center network supporting inpatient pediatric care and research in Kenya</title><source>Oxford University Press Journals All Titles (1996-Current)</source><source>MEDLINE</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><creator>Tuti, Timothy ; Bitok, Michael ; Paton, Chris ; Makone, Boniface ; Malla, Lucas ; Muinga, Naomi ; Gathara, David ; English, Mike</creator><creatorcontrib>Tuti, Timothy ; Bitok, Michael ; Paton, Chris ; Makone, Boniface ; Malla, Lucas ; Muinga, Naomi ; Gathara, David ; English, Mike</creatorcontrib><description>Objective To share approaches and innovations adopted to deliver a relatively inexpensive clinical data management (CDM) framework within a low-income setting that aims to deliver quality pediatric data useful for supporting research, strengthening the information culture and informing improvement efforts in local clinical practice. Materials and methods The authors implemented a CDM framework to support a Clinical Information Network (CIN) using Research Electronic Data Capture (REDCap), a noncommercial software solution designed for rapid development and deployment of electronic data capture tools. It was used for collection of standardized data from case records of multiple hospitals’ pediatric wards. R, an open-source statistical language, was used for data quality enhancement, analysis, and report generation for the hospitals. Results In the first year of CIN, the authors have developed innovative solutions to support the implementation of a secure, rapid pediatric data collection system spanning 14 hospital sites with stringent data quality checks. Data have been collated on over 37 000 admission episodes, with considerable improvement in clinical documentation of admissions observed. Using meta-programming techniques in R, coupled with branching logic, randomization, data lookup, and Application Programming Interface (API) features offered by REDCap, CDM tasks were configured and automated to ensure quality data was delivered for clinical improvement and research use. Conclusion A low-cost clinically focused but geographically dispersed quality CDM (Clinical Data Management) in a long-term, multi-site, and real world context can be achieved and sustained and challenges can be overcome through thoughtful design and implementation of open-source tools for handling data and supporting research.</description><identifier>ISSN: 1067-5027</identifier><identifier>EISSN: 1527-974X</identifier><identifier>DOI: 10.1093/jamia/ocv028</identifier><identifier>PMID: 26063746</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Biomedical Research ; Child ; Clinical Trials as Topic ; Data Collection - methods ; Hospitalization ; Humans ; Information Storage and Retrieval - methods ; Kenya ; Ownership ; Pediatrics ; Research and Applications ; Software</subject><ispartof>Journal of the American Medical Informatics Association : JAMIA, 2016-01, Vol.23 (1), p.184-192</ispartof><rights>The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2015</rights><rights>The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c416t-994a991c7217db875140c68437a1e02bce12800325ed465239d741e3d192aadb3</citedby><cites>FETCH-LOGICAL-c416t-994a991c7217db875140c68437a1e02bce12800325ed465239d741e3d192aadb3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4681113/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4681113/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,1578,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26063746$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tuti, Timothy</creatorcontrib><creatorcontrib>Bitok, Michael</creatorcontrib><creatorcontrib>Paton, Chris</creatorcontrib><creatorcontrib>Makone, Boniface</creatorcontrib><creatorcontrib>Malla, Lucas</creatorcontrib><creatorcontrib>Muinga, Naomi</creatorcontrib><creatorcontrib>Gathara, David</creatorcontrib><creatorcontrib>English, Mike</creatorcontrib><title>Innovating to enhance clinical data management using non-commercial and open source solutions across a multi-center network supporting inpatient pediatric care and research in Kenya</title><title>Journal of the American Medical Informatics Association : JAMIA</title><addtitle>J Am Med Inform Assoc</addtitle><description>Objective To share approaches and innovations adopted to deliver a relatively inexpensive clinical data management (CDM) framework within a low-income setting that aims to deliver quality pediatric data useful for supporting research, strengthening the information culture and informing improvement efforts in local clinical practice. Materials and methods The authors implemented a CDM framework to support a Clinical Information Network (CIN) using Research Electronic Data Capture (REDCap), a noncommercial software solution designed for rapid development and deployment of electronic data capture tools. It was used for collection of standardized data from case records of multiple hospitals’ pediatric wards. R, an open-source statistical language, was used for data quality enhancement, analysis, and report generation for the hospitals. Results In the first year of CIN, the authors have developed innovative solutions to support the implementation of a secure, rapid pediatric data collection system spanning 14 hospital sites with stringent data quality checks. Data have been collated on over 37 000 admission episodes, with considerable improvement in clinical documentation of admissions observed. Using meta-programming techniques in R, coupled with branching logic, randomization, data lookup, and Application Programming Interface (API) features offered by REDCap, CDM tasks were configured and automated to ensure quality data was delivered for clinical improvement and research use. Conclusion A low-cost clinically focused but geographically dispersed quality CDM (Clinical Data Management) in a long-term, multi-site, and real world context can be achieved and sustained and challenges can be overcome through thoughtful design and implementation of open-source tools for handling data and supporting research.</description><subject>Biomedical Research</subject><subject>Child</subject><subject>Clinical Trials as Topic</subject><subject>Data Collection - methods</subject><subject>Hospitalization</subject><subject>Humans</subject><subject>Information Storage and Retrieval - methods</subject><subject>Kenya</subject><subject>Ownership</subject><subject>Pediatrics</subject><subject>Research and Applications</subject><subject>Software</subject><issn>1067-5027</issn><issn>1527-974X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>TOX</sourceid><sourceid>EIF</sourceid><recordid>eNp9kTtvFDEURkcIRB7QUSN3UGSIHzP2uEGKIh4RkWhAorPuem52HWbswY9F-WH8P7y7IYKG6lry8bmf_DXNC0bfMKrF-S3MDs6D3VI-PGqOWc9Vq1X37XE9U6nannJ11JykdEspk1z0T5sjLqkUqpPHza8r78MWsvNrkgNBvwFvkdjJeWdhIiNkIDN4WOOMPpOSdqQPvrVhnjFaVyHwIwkLepJCifV1ClPJLvhEwMaQ6iBzmbJrbVVgJB7zzxC_k1SWJcT9bueXGmK3YcHRQY7OEgsR9-6ICSHaTaXIJ_R38Kx5cgNTwuf387T5-v7dl8uP7fXnD1eXF9et7ZjMrdYdaM2s4kyNq0H1rKNWDp1QwJDylUXGB0oF73HsZM-FHlXHUIxMc4BxJU6btwfvUlYzjrv4ESazRDdDvDMBnPn3xruNWYet6eTAGBNV8PpeEMOPgimb2SWL0wQeQ0mGKTn0vR6ErujZAd1_WcSbhzWMml3TZt-0OTRd8Zd_R3uA_1RbgVcHIJTl_6rfzn-5VQ</recordid><startdate>20160101</startdate><enddate>20160101</enddate><creator>Tuti, Timothy</creator><creator>Bitok, Michael</creator><creator>Paton, Chris</creator><creator>Makone, Boniface</creator><creator>Malla, Lucas</creator><creator>Muinga, Naomi</creator><creator>Gathara, David</creator><creator>English, Mike</creator><general>Oxford University Press</general><scope>TOX</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20160101</creationdate><title>Innovating to enhance clinical data management using non-commercial and open source solutions across a multi-center network supporting inpatient pediatric care and research in Kenya</title><author>Tuti, Timothy ; Bitok, Michael ; Paton, Chris ; Makone, Boniface ; Malla, Lucas ; Muinga, Naomi ; Gathara, David ; English, Mike</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c416t-994a991c7217db875140c68437a1e02bce12800325ed465239d741e3d192aadb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Biomedical Research</topic><topic>Child</topic><topic>Clinical Trials as Topic</topic><topic>Data Collection - methods</topic><topic>Hospitalization</topic><topic>Humans</topic><topic>Information Storage and Retrieval - methods</topic><topic>Kenya</topic><topic>Ownership</topic><topic>Pediatrics</topic><topic>Research and Applications</topic><topic>Software</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tuti, Timothy</creatorcontrib><creatorcontrib>Bitok, Michael</creatorcontrib><creatorcontrib>Paton, Chris</creatorcontrib><creatorcontrib>Makone, Boniface</creatorcontrib><creatorcontrib>Malla, Lucas</creatorcontrib><creatorcontrib>Muinga, Naomi</creatorcontrib><creatorcontrib>Gathara, David</creatorcontrib><creatorcontrib>English, Mike</creatorcontrib><collection>Oxford Journals Open Access Collection</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of the American Medical Informatics Association : JAMIA</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tuti, Timothy</au><au>Bitok, Michael</au><au>Paton, Chris</au><au>Makone, Boniface</au><au>Malla, Lucas</au><au>Muinga, Naomi</au><au>Gathara, David</au><au>English, Mike</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Innovating to enhance clinical data management using non-commercial and open source solutions across a multi-center network supporting inpatient pediatric care and research in Kenya</atitle><jtitle>Journal of the American Medical Informatics Association : JAMIA</jtitle><addtitle>J Am Med Inform Assoc</addtitle><date>2016-01-01</date><risdate>2016</risdate><volume>23</volume><issue>1</issue><spage>184</spage><epage>192</epage><pages>184-192</pages><issn>1067-5027</issn><eissn>1527-974X</eissn><abstract>Objective To share approaches and innovations adopted to deliver a relatively inexpensive clinical data management (CDM) framework within a low-income setting that aims to deliver quality pediatric data useful for supporting research, strengthening the information culture and informing improvement efforts in local clinical practice. Materials and methods The authors implemented a CDM framework to support a Clinical Information Network (CIN) using Research Electronic Data Capture (REDCap), a noncommercial software solution designed for rapid development and deployment of electronic data capture tools. It was used for collection of standardized data from case records of multiple hospitals’ pediatric wards. R, an open-source statistical language, was used for data quality enhancement, analysis, and report generation for the hospitals. Results In the first year of CIN, the authors have developed innovative solutions to support the implementation of a secure, rapid pediatric data collection system spanning 14 hospital sites with stringent data quality checks. Data have been collated on over 37 000 admission episodes, with considerable improvement in clinical documentation of admissions observed. Using meta-programming techniques in R, coupled with branching logic, randomization, data lookup, and Application Programming Interface (API) features offered by REDCap, CDM tasks were configured and automated to ensure quality data was delivered for clinical improvement and research use. Conclusion A low-cost clinically focused but geographically dispersed quality CDM (Clinical Data Management) in a long-term, multi-site, and real world context can be achieved and sustained and challenges can be overcome through thoughtful design and implementation of open-source tools for handling data and supporting research.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>26063746</pmid><doi>10.1093/jamia/ocv028</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1067-5027
ispartof Journal of the American Medical Informatics Association : JAMIA, 2016-01, Vol.23 (1), p.184-192
issn 1067-5027
1527-974X
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4681113
source Oxford University Press Journals All Titles (1996-Current); MEDLINE; EZB-FREE-00999 freely available EZB journals; PubMed Central
subjects Biomedical Research
Child
Clinical Trials as Topic
Data Collection - methods
Hospitalization
Humans
Information Storage and Retrieval - methods
Kenya
Ownership
Pediatrics
Research and Applications
Software
title Innovating to enhance clinical data management using non-commercial and open source solutions across a multi-center network supporting inpatient pediatric care and research in Kenya
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-09T12%3A34%3A08IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Innovating%20to%20enhance%20clinical%20data%20management%20using%20non-commercial%20and%20open%20source%20solutions%20across%20a%20multi-center%20network%20supporting%20inpatient%20pediatric%20care%20and%20research%20in%20Kenya&rft.jtitle=Journal%20of%20the%20American%20Medical%20Informatics%20Association%20:%20JAMIA&rft.au=Tuti,%20Timothy&rft.date=2016-01-01&rft.volume=23&rft.issue=1&rft.spage=184&rft.epage=192&rft.pages=184-192&rft.issn=1067-5027&rft.eissn=1527-974X&rft_id=info:doi/10.1093/jamia/ocv028&rft_dat=%3Cproquest_pubme%3E1768559839%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1768559839&rft_id=info:pmid/26063746&rft_oup_id=10.1093/jamia/ocv028&rfr_iscdi=true