Defining an additivity framework for mixture research in inducible whole-cell biosensors
A novel additivity framework for mixture effect modelling in the context of whole cell inducible biosensors has been mathematically developed and implemented in R. The proposed method is a multivariate extension of the effective dose ( ED p ) concept. Specifically, the extension accounts for differe...
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Veröffentlicht in: | Scientific reports 2015-11, Vol.5 (1), p.17200-17200, Article 17200 |
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description | A novel additivity framework for mixture effect modelling in the context of whole cell inducible biosensors has been mathematically developed and implemented in R. The proposed method is a multivariate extension of the
effective dose
(
ED
p
) concept. Specifically, the extension accounts for differential maximal effects among analytes and response inhibition beyond the maximum permissive concentrations. This allows a multivariate extension of
Loewe additivity
, enabling direct application in a biphasic dose-response framework. The proposed additivity definition was validated and its applicability illustrated by studying the response of the cyanobacterial biosensor
Synechococcus elongatus
PCC 7942 pBG2120 to binary mixtures of Zn, Cu, Cd, Ag, Co and Hg. The novel method allowed by the first time to model complete dose-response profiles of an inducible whole cell biosensor to mixtures. In addition, the approach also allowed identification and quantification of departures from additivity (interactions) among analytes. The biosensor was found to respond in a near additive way to heavy metal mixtures except when Hg, Co and Ag were present, in which case strong interactions occurred. The method is a useful contribution for the whole cell biosensors discipline and related areas allowing to perform appropriate assessment of mixture effects in non-monotonic dose-response frameworks |
doi_str_mv | 10.1038/srep17200 |
format | Article |
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effective dose
(
ED
p
) concept. Specifically, the extension accounts for differential maximal effects among analytes and response inhibition beyond the maximum permissive concentrations. This allows a multivariate extension of
Loewe additivity
, enabling direct application in a biphasic dose-response framework. The proposed additivity definition was validated and its applicability illustrated by studying the response of the cyanobacterial biosensor
Synechococcus elongatus
PCC 7942 pBG2120 to binary mixtures of Zn, Cu, Cd, Ag, Co and Hg. The novel method allowed by the first time to model complete dose-response profiles of an inducible whole cell biosensor to mixtures. In addition, the approach also allowed identification and quantification of departures from additivity (interactions) among analytes. The biosensor was found to respond in a near additive way to heavy metal mixtures except when Hg, Co and Ag were present, in which case strong interactions occurred. The method is a useful contribution for the whole cell biosensors discipline and related areas allowing to perform appropriate assessment of mixture effects in non-monotonic dose-response frameworks</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/srep17200</identifier><identifier>PMID: 26606975</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>38 ; 38/44 ; 38/47 ; 631/1647/2017/1958 ; 631/326/2522 ; 639/705/531 ; 639/705/794 ; 96/10 ; Biosensing Techniques - methods ; Cells - metabolism ; Humanities and Social Sciences ; Models, Theoretical ; multidisciplinary ; Regression Analysis ; Reproducibility of Results ; Science ; Synechococcus</subject><ispartof>Scientific reports, 2015-11, Vol.5 (1), p.17200-17200, Article 17200</ispartof><rights>The Author(s) 2015</rights><rights>Copyright © 2015, Macmillan Publishers Limited 2015 Macmillan Publishers Limited</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c410t-2f11fa32ba63fcff5a503200f98a0cc8e2430494d30a7c442e7b6d91f72a91193</citedby><cites>FETCH-LOGICAL-c410t-2f11fa32ba63fcff5a503200f98a0cc8e2430494d30a7c442e7b6d91f72a91193</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4660423/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4660423/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,315,728,781,785,865,886,27926,27927,41122,42191,51578,53793,53795</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26606975$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Martin-Betancor, K.</creatorcontrib><creatorcontrib>Ritz, C.</creatorcontrib><creatorcontrib>Fernández-Piñas, F.</creatorcontrib><creatorcontrib>Leganés, F.</creatorcontrib><creatorcontrib>Rodea-Palomares, I.</creatorcontrib><title>Defining an additivity framework for mixture research in inducible whole-cell biosensors</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>A novel additivity framework for mixture effect modelling in the context of whole cell inducible biosensors has been mathematically developed and implemented in R. The proposed method is a multivariate extension of the
effective dose
(
ED
p
) concept. Specifically, the extension accounts for differential maximal effects among analytes and response inhibition beyond the maximum permissive concentrations. This allows a multivariate extension of
Loewe additivity
, enabling direct application in a biphasic dose-response framework. The proposed additivity definition was validated and its applicability illustrated by studying the response of the cyanobacterial biosensor
Synechococcus elongatus
PCC 7942 pBG2120 to binary mixtures of Zn, Cu, Cd, Ag, Co and Hg. The novel method allowed by the first time to model complete dose-response profiles of an inducible whole cell biosensor to mixtures. In addition, the approach also allowed identification and quantification of departures from additivity (interactions) among analytes. The biosensor was found to respond in a near additive way to heavy metal mixtures except when Hg, Co and Ag were present, in which case strong interactions occurred. 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The proposed method is a multivariate extension of the
effective dose
(
ED
p
) concept. Specifically, the extension accounts for differential maximal effects among analytes and response inhibition beyond the maximum permissive concentrations. This allows a multivariate extension of
Loewe additivity
, enabling direct application in a biphasic dose-response framework. The proposed additivity definition was validated and its applicability illustrated by studying the response of the cyanobacterial biosensor
Synechococcus elongatus
PCC 7942 pBG2120 to binary mixtures of Zn, Cu, Cd, Ag, Co and Hg. The novel method allowed by the first time to model complete dose-response profiles of an inducible whole cell biosensor to mixtures. In addition, the approach also allowed identification and quantification of departures from additivity (interactions) among analytes. The biosensor was found to respond in a near additive way to heavy metal mixtures except when Hg, Co and Ag were present, in which case strong interactions occurred. The method is a useful contribution for the whole cell biosensors discipline and related areas allowing to perform appropriate assessment of mixture effects in non-monotonic dose-response frameworks</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>26606975</pmid><doi>10.1038/srep17200</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 38 38/44 38/47 631/1647/2017/1958 631/326/2522 639/705/531 639/705/794 96/10 Biosensing Techniques - methods Cells - metabolism Humanities and Social Sciences Models, Theoretical multidisciplinary Regression Analysis Reproducibility of Results Science Synechococcus |
title | Defining an additivity framework for mixture research in inducible whole-cell biosensors |
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